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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170671205
LAHU01025615
455804
Euryarchaeota
GAA
Phe
>WENV170671589
LAHU01095375
455804
Euryarchaeota
GAA
Phe
>WENV170670960
LAHU01006428
274638
Euryarchaeota
TGC
Ala
>WENV170671463
LAHU01061877
655553
Euryarchaeota
CAC
Val
>WENV170671715
LAHU01137622
655553
Euryarchaeota
CAC
Val
>WENV170671060
LAHU01010551
455800
Euryarchaeota
GTT
Asn
>WENV170671563
LAHU01087300
455800
Euryarchaeota
GTT
Asn
>WENV170671605
LAHU01102728
243681
Euryarchaeota
CAT
Met
>WENV170671696
LAHU01133190
243681
Euryarchaeota
CAT
Met
>WENV170671815
LAHU01177586
655782
Euryarchaeota
GCC
Gly
>WENV170670967
LAHU01006576
655782
Euryarchaeota
GCC
Gly
>WENV170670774
LAHU01000802
655782
Euryarchaeota
GCC
Gly
>WENV170671402
LAHU01046962
274628
Euryarchaeota
TCT
Arg
>WENV170671403
LAHU01046962
274628
Euryarchaeota
TCT
Arg
>WENV170671119
LAHU01015446
87332
Euryarchaeota
GGA
Ser
>WENV170671519
LAHU01071802
87401
Euryarchaeota
GCT
Ser
>WENV170671131
LAHU01017321
87401
Euryarchaeota
GCT
Ser
>WENV170670942
LAHU01005645
456306
Euryarchaeota
GTT
Asn
>WENV170670837
LAHU01002204
456306
Euryarchaeota
GTT
Asn
>WENV170670735
LAHU01000125
456306
Euryarchaeota
GTT
Asn
>WENV170670993
LAHU01007473
655547
Euryarchaeota
GCA
Cys
>WENV170671147
LAHU01019053
655547
Euryarchaeota
GCA
Cys
>WENV170670961
LAHU01006430
300137
Euryarchaeota
GGC
Ala
>WENV170671061
LAHU01010551
274635
Euryarchaeota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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