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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170732617
LULJ01000278
455173
Alphaproteobacteria
GAA
Phe
>WENV170733401
LULJ01017032
45799
Alphaproteobacteria
GCT
Ser
>WENV170732470
LULJ01000026
180542
Alphaproteobacteria
TAG
Leu
>WENV170732983
LULJ01003064
30553
Alphaproteobacteria
GGA
Ser
>WENV170732759
LULJ01000854
780260
Alphaproteobacteria
GCA
Cys
>WENV170732822
LULJ01001364
218220
Alphaproteobacteria
>WENV170732884
LULJ01001858
655301
Alphaproteobacteria
GGT
Thr
>WENV170732476
LULJ01000026
45981
Alphaproteobacteria
TGA
Ser
>WENV170732976
LULJ01002938
277664
Alphaproteobacteria
GTC
Asp
>WENV170733067
LULJ01004302
277700
Alphaproteobacteria
GTG
His
>WENV170732821
LULJ01001359
274224
Alphaproteobacteria
CAT
Met
>WENV170733614
LULJ01036139
452894
Alphaproteobacteria
CCA
Trp
>WENV170732873
LULJ01001743
452894
Alphaproteobacteria
CCA
Trp
>WENV170732767
LULJ01000947
655363
Alphaproteobacteria
GGT
Thr
>WENV170732577
LULJ01000137
459032
Alphaproteobacteria
CCA
Trp
>WENV170732481
LULJ01000026
780299
Alphaproteobacteria
TCC
Gly
>WENV170732582
LULJ01000159
274039
Alphaproteobacteria
CAT
Met
>WENV170732543
LULJ01000088
455172
Alphaproteobacteria
GGC
Ala
>WENV170732816
LULJ01001299
455172
Alphaproteobacteria
GGC
Ala
>WENV170732571
LULJ01000128
655300
Alphaproteobacteria
GTT
Asn
>WENV170733609
LULJ01035078
272979
Alphaproteobacteria
GAT
Ile
>WENV170732790
LULJ01001114
454512
Alphaproteobacteria
CCA
Trp
>WENV170732896
LULJ01001956
455360
Alphaproteobacteria
CGC
Ala
>WENV170732764
LULJ01000939
270796
Alphaproteobacteria
GTC
Asp
>WENV170732808
LULJ01001259
655361
Alphaproteobacteria
GCC
Gly
>WENV170733124
LULJ01005773
655271
Alphaproteobacteria
GGT
Thr
>WENV170732726
LULJ01000734
656140
Alphaproteobacteria
GAC
Val
>WENV170733381
LULJ01015929
270798
Alphaproteobacteria
CGG
Pro
>WENV170732611
LULJ01000240
455171
Alphaproteobacteria
CGT
Thr
>WENV170732463
LULJ01000023
273907
Alphaproteobacteria
ACG
Arg
>WENV170732842
LULJ01001477
780582
Alphaproteobacteria
TCC
Gly
>WENV170732943
LULJ01002503
281027
Alphaproteobacteria
CCT
Arg
>WENV170732923
LULJ01002185
780298
Alphaproteobacteria
CTG
Gln
>WENV170733037
LULJ01003813
112839
Alphaproteobacteria
CAG
Leu
>WENV170732464
LULJ01000023
180543
Alphaproteobacteria
CAA
Leu
>WENV170733451
LULJ01019955
780039
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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