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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170734451
LULK01006281
655167
Alphaproteobacteria
TTC
Glu
>WENV170734111
LULK01001387
455173
Alphaproteobacteria
GAA
Phe
>WENV170734680
LULK01013928
653534
Alphaproteobacteria
GCC
Gly
>WENV170734681
LULK01013928
653534
Alphaproteobacteria
GCC
Gly
>WENV170733728
LULK01000020
45799
Alphaproteobacteria
GCT
Ser
>WENV170734810
LULK01021523
45799
Alphaproteobacteria
GCT
Ser
>WENV170734561
LULK01009822
180542
Alphaproteobacteria
TAG
Leu
>WENV170733688
LULK01000003
30553
Alphaproteobacteria
GGA
Ser
>WENV170734135
LULK01001550
780260
Alphaproteobacteria
GCA
Cys
>WENV170733755
LULK01000038
218220
Alphaproteobacteria
>WENV170734538
LULK01009349
655301
Alphaproteobacteria
GGT
Thr
>WENV170734817
LULK01021716
46035
Alphaproteobacteria
GGA
Ser
>WENV170734535
LULK01009265
656063
Alphaproteobacteria
GAC
Val
>WENV170734549
LULK01009505
45981
Alphaproteobacteria
TGA
Ser
>WENV170733662
LULK01000001
277664
Alphaproteobacteria
GTC
Asp
>WENV170733756
LULK01000038
277700
Alphaproteobacteria
GTG
His
>WENV170733660
LULK01000001
274224
Alphaproteobacteria
CAT
Met
>WENV170734757
LULK01018138
452894
Alphaproteobacteria
CCA
Trp
>WENV170733879
LULK01000278
452894
Alphaproteobacteria
CCA
Trp
>WENV170734936
LULK01032771
653532
Alphaproteobacteria
GTT
Asn
>WENV170733680
LULK01000002
655363
Alphaproteobacteria
GGT
Thr
>WENV170734950
LULK01034350
459032
Alphaproteobacteria
CCA
Trp
>WENV170734528
LULK01008756
780299
Alphaproteobacteria
TCC
Gly
>WENV170734341
LULK01004046
274039
Alphaproteobacteria
CAT
Met
>WENV170733666
LULK01000001
455172
Alphaproteobacteria
GGC
Ala
>WENV170734740
LULK01017358
455172
Alphaproteobacteria
GGC
Ala
>WENV170734880
LULK01027249
274223
Alphaproteobacteria
CCG
Arg
>WENV170734382
LULK01004858
655300
Alphaproteobacteria
GTT
Asn
>WENV170733716
LULK01000010
454512
Alphaproteobacteria
CCA
Trp
>WENV170733657
LULK01000001
455360
Alphaproteobacteria
CGC
Ala
>WENV170734019
LULK01000852
270796
Alphaproteobacteria
GTC
Asp
>WENV170734763
LULK01018346
270796
Alphaproteobacteria
GTC
Asp
>WENV170733718
LULK01000010
655361
Alphaproteobacteria
GCC
Gly
>WENV170733919
LULK01000385
655271
Alphaproteobacteria
GGT
Thr
>WENV170733664
LULK01000001
454504
Alphaproteobacteria
CAT
Met
>WENV170734917
LULK01030509
275560
Alphaproteobacteria
ACG
Arg
>WENV170733826
LULK01000161
656140
Alphaproteobacteria
GAC
Val
>WENV170734647
LULK01012791
270798
Alphaproteobacteria
CGG
Pro
>WENV170734493
LULK01007423
273907
Alphaproteobacteria
ACG
Arg
>WENV170735044
LULK01047372
780582
Alphaproteobacteria
TCC
Gly
>WENV170733757
LULK01000038
780582
Alphaproteobacteria
TCC
Gly
>WENV170733667
LULK01000001
281027
Alphaproteobacteria
CCT
Arg
>WENV170734429
LULK01005802
654791
Alphaproteobacteria
CTC
Glu
>WENV170734164
LULK01001890
780298
Alphaproteobacteria
CTG
Gln
>WENV170734329
LULK01003819
454914
Alphaproteobacteria
TTT
Lys
>WENV170734686
LULK01014201
180543
Alphaproteobacteria
CAA
Leu
>WENV170734619
LULK01011757
654103
Alphaproteobacteria
GAA
Phe
>WENV170733729
LULK01000021
780039
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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