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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170739264
LULQ01000073
275843
Alphaproteobacteria
CCT
Arg
>WENV170739238
LULQ01000031
655167
Alphaproteobacteria
TTC
Glu
>WENV170739348
LULQ01000362
270792
Alphaproteobacteria
CAT
Met
>WENV170739268
LULQ01000079
653534
Alphaproteobacteria
GCC
Gly
>WENV170739269
LULQ01000079
653534
Alphaproteobacteria
GCC
Gly
>WENV170739315
LULQ01000200
45799
Alphaproteobacteria
GCT
Ser
>WENV170739736
LULQ01010821
45799
Alphaproteobacteria
GCT
Ser
>WENV170739215
LULQ01000002
30553
Alphaproteobacteria
GGA
Ser
>WENV170739426
LULQ01001203
780260
Alphaproteobacteria
GCA
Cys
>WENV170739648
LULQ01006354
655301
Alphaproteobacteria
GGT
Thr
>WENV170739314
LULQ01000184
656063
Alphaproteobacteria
GAC
Val
>WENV170739534
LULQ01002888
45981
Alphaproteobacteria
TGA
Ser
>WENV170739192
LULQ01000001
277664
Alphaproteobacteria
GTC
Asp
>WENV170739326
LULQ01000271
219139
Alphaproteobacteria
TAG
Leu
>WENV170739796
LULQ01015227
277700
Alphaproteobacteria
GTG
His
>WENV170739190
LULQ01000001
274224
Alphaproteobacteria
CAT
Met
>WENV170739236
LULQ01000022
275153
Alphaproteobacteria
CGG
Pro
>WENV170739265
LULQ01000074
297572
Alphaproteobacteria
GTG
His
>WENV170739904
LULQ01030103
452894
Alphaproteobacteria
CCA
Trp
>WENV170739338
LULQ01000308
452894
Alphaproteobacteria
CCA
Trp
>WENV170739349
LULQ01000362
653532
Alphaproteobacteria
GTT
Asn
>WENV170739216
LULQ01000003
655363
Alphaproteobacteria
GGT
Thr
>WENV170739431
LULQ01001268
459032
Alphaproteobacteria
CCA
Trp
>WENV170739707
LULQ01009178
780299
Alphaproteobacteria
TCC
Gly
>WENV170739417
LULQ01001029
274039
Alphaproteobacteria
CAT
Met
>WENV170739196
LULQ01000001
455172
Alphaproteobacteria
GGC
Ala
>WENV170739579
LULQ01003996
455172
Alphaproteobacteria
GGC
Ala
>WENV170739271
LULQ01000080
274223
Alphaproteobacteria
CCG
Arg
>WENV170739249
LULQ01000049
113188
Alphaproteobacteria
GAG
Leu
>WENV170739414
LULQ01001023
655300
Alphaproteobacteria
GTT
Asn
>WENV170739222
LULQ01000007
454512
Alphaproteobacteria
CCA
Trp
>WENV170739250
LULQ01000052
454056
Alphaproteobacteria
CGT
Thr
>WENV170739187
LULQ01000001
455360
Alphaproteobacteria
CGC
Ala
>WENV170739248
LULQ01000048
270796
Alphaproteobacteria
GTC
Asp
>WENV170739274
LULQ01000080
270796
Alphaproteobacteria
GTC
Asp
>WENV170739226
LULQ01000007
655361
Alphaproteobacteria
GCC
Gly
>WENV170739194
LULQ01000001
454504
Alphaproteobacteria
CAT
Met
>WENV170739247
LULQ01000045
275560
Alphaproteobacteria
ACG
Arg
>WENV170739523
LULQ01002744
656140
Alphaproteobacteria
GAC
Val
>WENV170739272
LULQ01000080
671670
Alphaproteobacteria
CAC
Val
>WENV170739897
LULQ01028323
273907
Alphaproteobacteria
ACG
Arg
>WENV170739788
LULQ01014743
780582
Alphaproteobacteria
TCC
Gly
>WENV170739197
LULQ01000001
281027
Alphaproteobacteria
CCT
Arg
>WENV170739630
LULQ01005732
780298
Alphaproteobacteria
CTG
Gln
>WENV170739251
LULQ01000052
454914
Alphaproteobacteria
TTT
Lys
>WENV170739684
LULQ01007691
180543
Alphaproteobacteria
CAA
Leu
>WENV170739243
LULQ01000042
654103
Alphaproteobacteria
GAA
Phe
>WENV170739228
LULQ01000010
780039
Alphaproteobacteria
GCA
Cys
>WENV170739528
LULQ01002800
304024
Alphaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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