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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170002240
AGSF01001047
235681
Cyanobacteriota
CCA
Trp
>WENV170002293
AGSF01006105
235681
Cyanobacteriota
CCA
Trp
>WENV170002316
AGSF01011223
235681
Cyanobacteriota
CCA
Trp
>WENV170002225
AGSF01000936
145539
Cyanobacteriota
GTC
Asp
>WENV170002288
AGSF01004828
145539
Cyanobacteriota
GTC
Asp
>WENV170002309
AGSF01009838
145539
Cyanobacteriota
GTC
Asp
>WENV170002196
AGSF01000201
342477
Cyanobacteriota
TGT
Thr
>WENV170002334
AGSF01015826
282142
Cyanobacteriota
GTG
His
>WENV170002238
AGSF01001014
341020
Cyanobacteriota
GCC
Gly
>WENV170002261
AGSF01001733
341020
Cyanobacteriota
GCC
Gly
>WENV170002314
AGSF01010749
341020
Cyanobacteriota
GCC
Gly
>WENV170002318
AGSF01011355
341020
Cyanobacteriota
GCC
Gly
>WENV170002187
AGSF01000049
242701
Cyanobacteriota
GTG
His
>WENV170002251
AGSF01001470
242701
Cyanobacteriota
GTG
His
>WENV170002207
AGSF01000729
145480
Cyanobacteriota
CGG
Pro
>WENV170002291
AGSF01005258
145480
Cyanobacteriota
CGG
Pro
>WENV170002229
AGSF01000970
175353
Cyanobacteriota
CAT
Met
>WENV170002230
AGSF01000970
175353
Cyanobacteriota
CAT
Met
>WENV170002194
AGSF01000183
417134
Cyanobacteriota
TCC
Gly
>WENV170002289
AGSF01004911
417134
Cyanobacteriota
TCC
Gly
>WENV170002217
AGSF01000837
358497
Cyanobacteriota
TTT
Lys
>WENV170002306
AGSF01009262
358497
Cyanobacteriota
TTT
Lys
>WENV170002185
AGSF01000042
239591
Cyanobacteriota
GTG
His
>WENV170002247
AGSF01001149
239591
Cyanobacteriota
GTG
His
>WENV170002286
AGSF01004755
239591
Cyanobacteriota
GTG
His
>WENV170002226
AGSF01000945
338427
Cyanobacteriota
GTT
Asn
>WENV170002269
AGSF01002194
338427
Cyanobacteriota
GTT
Asn
>WENV170002294
AGSF01006233
338427
Cyanobacteriota
GTT
Asn
>WENV170002312
AGSF01010277
338427
Cyanobacteriota
GTT
Asn
>WENV170002317
AGSF01011271
338427
Cyanobacteriota
GTT
Asn
>WENV170002322
AGSF01012931
338427
Cyanobacteriota
GTT
Asn
>WENV170002333
AGSF01015366
338427
Cyanobacteriota
GTT
Asn
>WENV170002227
AGSF01000956
96866
Cyanobacteriota
TAG
Leu
>WENV170002257
AGSF01001570
96866
Cyanobacteriota
TAG
Leu
>WENV170002320
AGSF01012877
96866
Cyanobacteriota
TAG
Leu
>WENV170002209
AGSF01000749
242587
Cyanobacteriota
TGC
Ala
>WENV170002259
AGSF01001637
242587
Cyanobacteriota
TGC
Ala
>WENV170002305
AGSF01008803
242587
Cyanobacteriota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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