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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170553510
CXWK01021541
239252
Betaproteobacteria
TTT
Lys
>WENV170554213
CXWK01054258
152292
Betaproteobacteria
TTG
Gln
>WENV170553095
CXWK01007461
147079
Betaproteobacteria
TTG
Gln
>WENV170553130
CXWK01008755
412167
Betaproteobacteria
GCA
Cys
>WENV170553335
CXWK01015294
400411
Betaproteobacteria
GGT
Thr
>WENV170553495
CXWK01020865
251462
Betaproteobacteria
GCC
Gly
>WENV170552831
CXWK01002523
313235
Betaproteobacteria
TTC
Glu
>WENV170553333
CXWK01015294
77135
Betaproteobacteria
GTA
Tyr
>WENV170553750
CXWK01030047
301533
Betaproteobacteria
GTG
His
>WENV170553765
CXWK01030412
301533
Betaproteobacteria
GTG
His
>WENV170554336
CXWK01062830
339995
Betaproteobacteria
CAC
Val
>WENV170553894
CXWK01036772
372150
Betaproteobacteria
CAC
Val
>WENV170553496
CXWK01020865
412095
Betaproteobacteria
GCA
Cys
>WENV170554927
CXWK01091353
199861
Betaproteobacteria
CAT
Met
>WENV170553887
CXWK01036215
96247
Betaproteobacteria
GAG
Leu
>WENV170554063
CXWK01045275
292518
Betaproteobacteria
TTT
Lys
>WENV170553849
CXWK01034323
154591
Betaproteobacteria
CAT
Met
>WENV170554726
CXWK01087316
154591
Betaproteobacteria
CAT
Met
>WENV170553832
CXWK01033126
245575
Betaproteobacteria
CGT
Thr
>WENV170554077
CXWK01045527
162621
Betaproteobacteria
TTG
Gln
>WENV170553674
CXWK01027212
147666
Betaproteobacteria
CAT
Met
>WENV170553393
CXWK01016926
352197
Betaproteobacteria
GGT
Thr
>WENV170553915
CXWK01037827
72012
Betaproteobacteria
CAG
Leu
>WENV170553827
CXWK01032752
96979
Betaproteobacteria
GAG
Leu
>WENV170554396
CXWK01067368
96979
Betaproteobacteria
GAG
Leu
>WENV170554215
CXWK01054289
162620
Betaproteobacteria
ACG
Arg
>WENV170554300
CXWK01060562
148851
Betaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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