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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
152 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170663418
JYMV01005380
146789
Gammaproteobacteria
TCT
Arg
>WENV170665927
JYMV01031553
146789
Gammaproteobacteria
TCT
Arg
>WENV170667568
JYMV01048991
146789
Gammaproteobacteria
TCT
Arg
>WENV170665435
JYMV01026247
20025
Gammaproteobacteria
GGA
Ser
>WENV170666429
JYMV01036919
20025
Gammaproteobacteria
GGA
Ser
>WENV170664952
JYMV01021253
235887
Gammaproteobacteria
GTG
His
>WENV170665270
JYMV01024087
235887
Gammaproteobacteria
GTG
His
>WENV170664443
JYMV01016285
277725
Gammaproteobacteria
TAC
Val
>WENV170664947
JYMV01021253
277725
Gammaproteobacteria
TAC
Val
>WENV170666138
JYMV01033768
113631
Gammaproteobacteria
GTA
Tyr
>WENV170666142
JYMV01033769
113631
Gammaproteobacteria
GTA
Tyr
>WENV170664356
JYMV01015662
236480
Gammaproteobacteria
GTG
His
>WENV170664359
JYMV01015662
236480
Gammaproteobacteria
GTG
His
>WENV170667418
JYMV01047263
236480
Gammaproteobacteria
GTG
His
>WENV170667421
JYMV01047263
236480
Gammaproteobacteria
GTG
His
>WENV170665407
JYMV01025835
149035
Gammaproteobacteria
CCG
Arg
>WENV170664377
JYMV01015775
145368
Gammaproteobacteria
CCT
Arg
>WENV170666739
JYMV01040319
145368
Gammaproteobacteria
CCT
Arg
>WENV170664117
JYMV01012968
238438
Gammaproteobacteria
>WENV170665364
JYMV01025316
238438
Gammaproteobacteria
>WENV170665376
JYMV01025390
238438
Gammaproteobacteria
>WENV170665377
JYMV01025391
238438
Gammaproteobacteria
>WENV170667716
JYMV01050667
281920
Gammaproteobacteria
CCA
Trp
>WENV170663494
JYMV01006108
283668
Gammaproteobacteria
TTT
Lys
>WENV170663495
JYMV01006109
283668
Gammaproteobacteria
TTT
Lys
>WENV170665093
JYMV01022471
283668
Gammaproteobacteria
TTT
Lys
>WENV170667308
JYMV01045750
283668
Gammaproteobacteria
TTT
Lys
>WENV170663770
JYMV01009222
58822
Gammaproteobacteria
CAA
Leu
>WENV170664819
JYMV01020194
58822
Gammaproteobacteria
CAA
Leu
>WENV170664813
JYMV01020133
236013
Gammaproteobacteria
TGC
Ala
>WENV170664626
JYMV01018370
147053
Gammaproteobacteria
GTT
Asn
>WENV170664627
JYMV01018370
147053
Gammaproteobacteria
GTT
Asn
>WENV170666434
JYMV01036919
147053
Gammaproteobacteria
GTT
Asn
>WENV170666435
JYMV01036919
147053
Gammaproteobacteria
GTT
Asn
>WENV170667284
JYMV01045595
147053
Gammaproteobacteria
GTT
Asn
>WENV170667285
JYMV01045595
147053
Gammaproteobacteria
GTT
Asn
>WENV170664399
JYMV01015962
145260
Gammaproteobacteria
CAT
Met
>WENV170664402
JYMV01015962
145260
Gammaproteobacteria
CAT
Met
>WENV170667885
JYMV01052744
145260
Gammaproteobacteria
CAT
Met
>WENV170667890
JYMV01052744
145260
Gammaproteobacteria
CAT
Met
>WENV170664992
JYMV01021566
160030
Gammaproteobacteria
GGG
Pro
>WENV170665761
JYMV01030018
160030
Gammaproteobacteria
GGG
Pro
>WENV170667855
JYMV01052232
160030
Gammaproteobacteria
GGG
Pro
>WENV170663292
JYMV01003747
236366
Gammaproteobacteria
GTG
His
>WENV170663517
JYMV01006482
236366
Gammaproteobacteria
GTG
His
>WENV170664462
JYMV01016519
236366
Gammaproteobacteria
GTG
His
>WENV170664789
JYMV01019954
236366
Gammaproteobacteria
GTG
His
>WENV170667219
JYMV01044751
236366
Gammaproteobacteria
GTG
His
>WENV170667607
JYMV01049456
236366
Gammaproteobacteria
GTG
His
>WENV170667845
JYMV01052182
236366
Gammaproteobacteria
GTG
His
>WENV170664562
JYMV01017769
145367
Gammaproteobacteria
GGG
Pro
>WENV170664564
JYMV01017770
145367
Gammaproteobacteria
GGG
Pro
>WENV170666714
JYMV01040054
185163
Gammaproteobacteria
ACG
Arg
>WENV170666715
JYMV01040054
185163
Gammaproteobacteria
ACG
Arg
>WENV170663057
JYMV01001278
149036
Gammaproteobacteria
CCA
Trp
>WENV170665854
JYMV01030868
149036
Gammaproteobacteria
CCA
Trp
>WENV170666716
JYMV01040054
149036
Gammaproteobacteria
CCA
Trp
>WENV170667313
JYMV01045805
149036
Gammaproteobacteria
CCA
Trp
>WENV170666139
JYMV01033768
338534
Gammaproteobacteria
TCC
Gly
>WENV170666143
JYMV01033769
338534
Gammaproteobacteria
TCC
Gly
>WENV170663375
JYMV01004942
145261
Gammaproteobacteria
CAT
Met
>WENV170663680
JYMV01008479
145261
Gammaproteobacteria
CAT
Met
>WENV170664817
JYMV01020194
145366
Gammaproteobacteria
ACG
Arg
>WENV170664818
JYMV01020194
145366
Gammaproteobacteria
ACG
Arg
>WENV170665345
JYMV01025072
145366
Gammaproteobacteria
ACG
Arg
>WENV170665346
JYMV01025072
145366
Gammaproteobacteria
ACG
Arg
>WENV170663775
JYMV01009222
16284
Gammaproteobacteria
TGA
Ser
>WENV170664956
JYMV01021253
16284
Gammaproteobacteria
TGA
Ser
>WENV170664227
JYMV01014112
276551
Gammaproteobacteria
GAA
Phe
>WENV170665989
JYMV01032125
276551
Gammaproteobacteria
GAA
Phe
>WENV170666639
JYMV01039223
276551
Gammaproteobacteria
GAA
Phe
>WENV170666791
JYMV01040469
276551
Gammaproteobacteria
GAA
Phe
>WENV170667283
JYMV01045592
276551
Gammaproteobacteria
GAA
Phe
>WENV170664053
JYMV01012426
276551
Gammaproteobacteria
GAA
Phe
>WENV170665839
JYMV01030757
145369
Gammaproteobacteria
CGG
Pro
>WENV170667675
JYMV01050274
145369
Gammaproteobacteria
CGG
Pro
>WENV170665862
JYMV01030975
412799
Gammaproteobacteria
GCA
Cys
>WENV170665983
JYMV01032107
412799
Gammaproteobacteria
GCA
Cys
>WENV170663299
JYMV01003958
340801
Gammaproteobacteria
CCT
Arg
>WENV170666712
JYMV01040054
340801
Gammaproteobacteria
CCT
Arg
>WENV170664362
JYMV01015663
95983
Gammaproteobacteria
>WENV170664498
JYMV01016953
426403
Gammaproteobacteria
GCA
Cys
>WENV170663250
JYMV01003398
289927
Gammaproteobacteria
GAA
Phe
>WENV170665665
JYMV01029113
289927
Gammaproteobacteria
GAA
Phe
>WENV170664357
JYMV01015662
97031
Gammaproteobacteria
TAG
Leu
>WENV170664360
JYMV01015662
97031
Gammaproteobacteria
TAG
Leu
>WENV170664400
JYMV01015962
97031
Gammaproteobacteria
TAG
Leu
>WENV170664403
JYMV01015962
97031
Gammaproteobacteria
TAG
Leu
>WENV170667419
JYMV01047263
97031
Gammaproteobacteria
TAG
Leu
>WENV170667422
JYMV01047263
97031
Gammaproteobacteria
TAG
Leu
>WENV170667886
JYMV01052744
97031
Gammaproteobacteria
TAG
Leu
>WENV170667888
JYMV01052744
97031
Gammaproteobacteria
TAG
Leu
>WENV170667891
JYMV01052744
97031
Gammaproteobacteria
TAG
Leu
>WENV170664354
JYMV01015662
149038
Gammaproteobacteria
TGG
Pro
>WENV170664358
JYMV01015662
149038
Gammaproteobacteria
TGG
Pro
>WENV170664361
JYMV01015662
149038
Gammaproteobacteria
TGG
Pro
>WENV170667416
JYMV01047263
149038
Gammaproteobacteria
TGG
Pro
>WENV170667420
JYMV01047263
149038
Gammaproteobacteria
TGG
Pro
>WENV170667423
JYMV01047263
149038
Gammaproteobacteria
TGG
Pro
>WENV170664084
JYMV01012689
59830
Gammaproteobacteria
CAA
Leu
>WENV170665952
JYMV01031820
59830
Gammaproteobacteria
CAA
Leu
>WENV170665911
JYMV01031463
237412
Gammaproteobacteria
TAC
Val
>WENV170665076
JYMV01022309
162634
Gammaproteobacteria
GTC
Asp
>WENV170667718
JYMV01050743
147118
Gammaproteobacteria
GAC
Val
>WENV170666713
JYMV01040054
10767
Gammaproteobacteria
GCT
Ser
>WENV170664944
JYMV01021253
145365
Gammaproteobacteria
GAC
Val
>WENV170667672
JYMV01050242
145365
Gammaproteobacteria
GAC
Val
>WENV170663566
JYMV01006949
411842
Gammaproteobacteria
GCA
Cys
>WENV170663419
JYMV01005380
278793
Gammaproteobacteria
GTG
His
>WENV170665928
JYMV01031553
278793
Gammaproteobacteria
GTG
His
>WENV170667569
JYMV01048991
278793
Gammaproteobacteria
GTG
His
>WENV170663777
JYMV01009222
235886
Gammaproteobacteria
TTC
Glu
>WENV170664821
JYMV01020194
235886
Gammaproteobacteria
TTC
Glu
>WENV170664949
JYMV01021253
235886
Gammaproteobacteria
TTC
Glu
>WENV170665267
JYMV01024087
235886
Gammaproteobacteria
TTC
Glu
>WENV170664583
JYMV01017906
151889
Gammaproteobacteria
CAT
Met
>WENV170666419
JYMV01036871
151889
Gammaproteobacteria
CAT
Met
>WENV170667433
JYMV01047396
146807
Gammaproteobacteria
TCT
Arg
>WENV170664954
JYMV01021253
243921
Gammaproteobacteria
TTT
Lys
>WENV170664955
JYMV01021253
243921
Gammaproteobacteria
TTT
Lys
>WENV170667673
JYMV01050242
243921
Gammaproteobacteria
TTT
Lys
>WENV170667674
JYMV01050242
243921
Gammaproteobacteria
TTT
Lys
>WENV170663956
JYMV01011098
59658
Gammaproteobacteria
CAA
Leu
>WENV170666220
JYMV01034655
59658
Gammaproteobacteria
CAA
Leu
>WENV170663769
JYMV01009214
293332
Gammaproteobacteria
GAA
Phe
>WENV170664441
JYMV01016285
235884
Gammaproteobacteria
TAC
Val
>WENV170664945
JYMV01021253
235884
Gammaproteobacteria
TAC
Val
>WENV170663239
JYMV01003336
149037
Gammaproteobacteria
GAC
Val
>WENV170663437
JYMV01005610
149037
Gammaproteobacteria
GAC
Val
>WENV170664405
JYMV01015962
149037
Gammaproteobacteria
GAC
Val
>WENV170663774
JYMV01009222
411735
Gammaproteobacteria
GCA
Cys
>WENV170666942
JYMV01042270
411735
Gammaproteobacteria
GCA
Cys
>WENV170665450
JYMV01026402
45411
Gammaproteobacteria
GGA
Ser
>WENV170663271
JYMV01003583
101786
Gammaproteobacteria
GAG
Leu
>WENV170663719
JYMV01008816
101786
Gammaproteobacteria
GAG
Leu
>WENV170663953
JYMV01011073
101786
Gammaproteobacteria
GAG
Leu
>WENV170666184
JYMV01034255
101786
Gammaproteobacteria
GAG
Leu
>WENV170666228
JYMV01034806
101786
Gammaproteobacteria
GAG
Leu
>WENV170666439
JYMV01036972
288517
Gammaproteobacteria
TGT
Thr
>WENV170664950
JYMV01021253
198797
Gammaproteobacteria
TGG
Pro
>WENV170665268
JYMV01024087
198797
Gammaproteobacteria
TGG
Pro
>WENV170664679
JYMV01018959
45152
Gammaproteobacteria
GGA
Ser
>WENV170665024
JYMV01021940
45152
Gammaproteobacteria
GGA
Ser
>WENV170665320
JYMV01024799
45152
Gammaproteobacteria
GGA
Ser
>WENV170663565
JYMV01006949
270352
Gammaproteobacteria
GCC
Gly
>WENV170663970
JYMV01011233
270352
Gammaproteobacteria
GCC
Gly
>WENV170665030
JYMV01021996
270352
Gammaproteobacteria
GCC
Gly
>WENV170666126
JYMV01033657
270352
Gammaproteobacteria
GCC
Gly
>WENV170664005
JYMV01011919
173617
Gammaproteobacteria
GTC
Asp
>WENV170663561
JYMV01006890
344326
Gammaproteobacteria
TTC
Glu
>WENV170667183
JYMV01044324
344326
Gammaproteobacteria
TTC
Glu
>WENV170666660
JYMV01039419
133560
Gammaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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