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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
113 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180569302
OCLR01000013
6892
Bacillota
CGA
Ser
>WENV180569960
OCLR01001075
109048
Bacillota
TAG
Leu
>WENV180569558
OCLR01000167
235908
Bacillota
GGT
Thr
>WENV180569228
OCLR01000002
37090
Bacillota
TAA
Leu
>WENV180569826
OCLR01000523
37110
Bacillota
TAA
Leu
>WENV180569829
OCLR01000523
37110
Bacillota
TAA
Leu
>WENV180569455
OCLR01000084
95695
Bacillota
GTA
Tyr
>WENV180569459
OCLR01000084
95695
Bacillota
GTA
Tyr
>WENV180569637
OCLR01000255
338227
Bacillota
CCT
Arg
>WENV180569458
OCLR01000084
338544
Bacillota
TGT
Thr
>WENV180569672
OCLR01000298
338544
Bacillota
TGT
Thr
>WENV180569888
OCLR01000674
338544
Bacillota
TGT
Thr
>WENV180569865
OCLR01000616
305466
Bacillota
GTG
His
>WENV180569444
OCLR01000076
235535
Bacillota
>WENV180569645
OCLR01000259
106079
Bacillota
TAG
Leu
>WENV180569562
OCLR01000176
411591
Bacillota
GGT
Thr
>WENV180569649
OCLR01000259
147639
Bacillota
ACG
Arg
>WENV180569271
OCLR01000007
413601
Bacillota
GCA
Cys
>WENV180569500
OCLR01000111
235903
Bacillota
TTT
Lys
>WENV180569898
OCLR01000725
235903
Bacillota
TTT
Lys
>WENV180569919
OCLR01000889
235903
Bacillota
TTT
Lys
>WENV180569946
OCLR01000964
235903
Bacillota
TTT
Lys
>WENV180569821
OCLR01000511
23437
Bacillota
GGA
Ser
>WENV180569218
OCLR01000002
20559
Bacillota
GCT
Ser
>WENV180569295
OCLR01000010
302152
Bacillota
CTT
Lys
>WENV180569296
OCLR01000010
302152
Bacillota
CTT
Lys
>WENV180569810
OCLR01000491
338552
Bacillota
ACG
Arg
>WENV180569945
OCLR01000964
235902
Bacillota
CTT
Lys
>WENV180569499
OCLR01000111
338557
Bacillota
TTG
Gln
>WENV180569897
OCLR01000725
338557
Bacillota
TTG
Gln
>WENV180569918
OCLR01000889
338557
Bacillota
TTG
Gln
>WENV180569306
OCLR01000016
235534
Bacillota
GAC
Val
>WENV180569557
OCLR01000167
388249
Bacillota
GCA
Cys
>WENV180570003
OCLR01001235
116350
Bacillota
TAG
Leu
>WENV180569457
OCLR01000084
186380
Bacillota
GTC
Asp
>WENV180569671
OCLR01000298
186380
Bacillota
GTC
Asp
>WENV180569675
OCLR01000298
186380
Bacillota
GTC
Asp
>WENV180569887
OCLR01000674
186380
Bacillota
GTC
Asp
>WENV180569530
OCLR01000130
58829
Bacillota
CAA
Leu
>WENV180569253
OCLR01000007
58766
Bacillota
GAG
Leu
>WENV180569232
OCLR01000002
145264
Bacillota
CAT
Met
>WENV180569422
OCLR01000059
96360
Bacillota
GTA
Tyr
>WENV180569269
OCLR01000007
338342
Bacillota
TTG
Gln
>WENV180569229
OCLR01000002
144988
Bacillota
ACG
Arg
>WENV180569256
OCLR01000007
113622
Bacillota
GTA
Tyr
>WENV180569266
OCLR01000007
113622
Bacillota
GTA
Tyr
>WENV180569234
OCLR01000002
6891
Bacillota
>WENV180569820
OCLR01000511
338555
Bacillota
CCT
Arg
>WENV180569556
OCLR01000167
243345
Bacillota
GAA
Phe
>WENV180569886
OCLR01000674
243345
Bacillota
GAA
Phe
>WENV180569456
OCLR01000084
312468
Bacillota
TAC
Val
>WENV180569670
OCLR01000298
312468
Bacillota
TAC
Val
>WENV180569674
OCLR01000298
312468
Bacillota
TAC
Val
>WENV180569242
OCLR01000002
16256
Bacillota
GCT
Ser
>WENV180569568
OCLR01000184
95696
Bacillota
TAG
Leu
>WENV180569485
OCLR01000103
238745
Bacillota
CTT
Lys
>WENV180569902
OCLR01000725
145385
Bacillota
TCG
Arg
>WENV180569454
OCLR01000084
367412
Bacillota
GTT
Asn
>WENV180569925
OCLR01000911
367412
Bacillota
GTT
Asn
>WENV180569926
OCLR01000911
367412
Bacillota
GTT
Asn
>WENV180569452
OCLR01000082
10779
Bacillota
CGA
Ser
>WENV180570075
OCLR01001593
47370
Bacillota
TAA
Leu
>WENV180569341
OCLR01000028
340986
Bacillota
CCT
Arg
>WENV180569602
OCLR01000214
41203
Bacillota
AAG
Leu
>WENV180569641
OCLR01000257
41203
Bacillota
AAG
Leu
>WENV180569900
OCLR01000725
338558
Bacillota
GCC
Gly
>WENV180569543
OCLR01000156
339391
Bacillota
TTC
Glu
>WENV180569992
OCLR01001191
339391
Bacillota
TTC
Glu
>WENV180569225
OCLR01000002
235530
Bacillota
TTT
Lys
>WENV180569258
OCLR01000007
235530
Bacillota
TTT
Lys
>WENV180569260
OCLR01000007
10568
Bacillota
GGA
Ser
>WENV180569496
OCLR01000111
411739
Bacillota
TCC
Gly
>WENV180569755
OCLR01000417
411739
Bacillota
TCC
Gly
>WENV180569901
OCLR01000725
411739
Bacillota
TCC
Gly
>WENV180570049
OCLR01001341
411739
Bacillota
TCC
Gly
>WENV180569238
OCLR01000002
307577
Bacillota
GTG
His
>WENV180569257
OCLR01000007
338345
Bacillota
TTG
Gln
>WENV180570088
OCLR01001894
235506
Bacillota
TGC
Ala
>WENV180569224
OCLR01000002
235529
Bacillota
TGT
Thr
>WENV180569498
OCLR01000111
279635
Bacillota
GTG
His
>WENV180569917
OCLR01000889
279635
Bacillota
GTG
His
>WENV180569580
OCLR01000193
338344
Bacillota
CCT
Arg
>WENV180569217
OCLR01000002
235533
Bacillota
GTT
Asn
>WENV180569241
OCLR01000002
235533
Bacillota
GTT
Asn
>WENV180569259
OCLR01000007
235533
Bacillota
GTT
Asn
>WENV180569443
OCLR01000076
235533
Bacillota
GTT
Asn
>WENV180569272
OCLR01000007
72325
Bacillota
CAA
Leu
>WENV180569479
OCLR01000098
144795
Bacillota
GTT
Asn
>WENV180569806
OCLR01000491
17822
Bacillota
TGA
Ser
>WENV180569808
OCLR01000491
17822
Bacillota
TGA
Ser
>WENV180569657
OCLR01000274
16270
Bacillota
>WENV180569508
OCLR01000117
338225
Bacillota
CCG
Arg
>WENV180569497
OCLR01000111
145383
Bacillota
TCT
Arg
>WENV180570047
OCLR01001341
145383
Bacillota
TCT
Arg
>WENV180570113
OCLR01003083
74162
Bacillota
CAA
Leu
>WENV180569872
OCLR01000620
338553
Bacillota
CTC
Glu
>WENV180569899
OCLR01000725
95697
Bacillota
TAG
Leu
>WENV180569669
OCLR01000298
338545
Bacillota
>WENV180569673
OCLR01000298
338545
Bacillota
>WENV180569889
OCLR01000674
338545
Bacillota
>WENV180569270
OCLR01000007
338343
Bacillota
GCC
Gly
>WENV180569221
OCLR01000002
411647
Bacillota
TCC
Gly
>WENV180569239
OCLR01000002
411647
Bacillota
TCC
Gly
>WENV180569237
OCLR01000002
235532
Bacillota
GAA
Phe
>WENV180569265
OCLR01000007
235532
Bacillota
GAA
Phe
>WENV180569569
OCLR01000184
338556
Bacillota
CCC
Gly
>WENV180569451
OCLR01000082
81208
Bacillota
CAG
Leu
>WENV180569570
OCLR01000186
80673
Bacillota
GAG
Leu
>WENV180569728
OCLR01000360
44932
Bacillota
>WENV180569978
OCLR01001096
7065
Bacillota
GCT
Ser
>WENV180569268
OCLR01000007
235528
Bacillota
GTG
His
>WENV180569807
OCLR01000491
17824
Bacillota
GCT
Ser
>WENV180569809
OCLR01000491
17824
Bacillota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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