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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
104 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182542686
OJAZ01000644
147023
Gammaproteobacteria
CAT
Met
>WENV182542797
OJAZ01002479
10780
Gammaproteobacteria
GCT
Ser
>WENV182542626
OJAZ01000169
235887
Gammaproteobacteria
GTG
His
>WENV182543078
OJAZ01029776
146646
Gammaproteobacteria
TGG
Pro
>WENV182542651
OJAZ01000268
14613
Gammaproteobacteria
TGA
Ser
>WENV182542652
OJAZ01000268
14613
Gammaproteobacteria
TGA
Ser
>WENV182542653
OJAZ01000268
14613
Gammaproteobacteria
TGA
Ser
>WENV182542734
OJAZ01001350
149065
Gammaproteobacteria
CCA
Trp
>WENV182542782
OJAZ01002187
149065
Gammaproteobacteria
CCA
Trp
>WENV182542618
OJAZ01000112
147048
Gammaproteobacteria
CCA
Trp
>WENV182542634
OJAZ01000193
147048
Gammaproteobacteria
CCA
Trp
>WENV182543045
OJAZ01021303
149066
Gammaproteobacteria
CAT
Met
>WENV182543039
OJAZ01019992
279385
Gammaproteobacteria
TTT
Lys
>WENV182542759
OJAZ01001726
238499
Gammaproteobacteria
TAC
Val
>WENV182542611
OJAZ01000061
145368
Gammaproteobacteria
CCT
Arg
>WENV182542729
OJAZ01001214
95973
Gammaproteobacteria
CAA
Leu
>WENV182542818
OJAZ01003109
248041
Gammaproteobacteria
GGC
Ala
>WENV182542601
OJAZ01000054
58822
Gammaproteobacteria
CAA
Leu
>WENV182542623
OJAZ01000166
147053
Gammaproteobacteria
GTT
Asn
>WENV182542728
OJAZ01001213
145260
Gammaproteobacteria
CAT
Met
>WENV182542825
OJAZ01003326
95866
Gammaproteobacteria
GTA
Tyr
>WENV182542588
OJAZ01000034
145367
Gammaproteobacteria
GGG
Pro
>WENV182543016
OJAZ01016245
240619
Gammaproteobacteria
TGT
Thr
>WENV182542869
OJAZ01004585
237710
Gammaproteobacteria
TTT
Lys
>WENV182542617
OJAZ01000102
237709
Gammaproteobacteria
GTG
His
>WENV182542663
OJAZ01000392
149036
Gammaproteobacteria
CCA
Trp
>WENV182542707
OJAZ01000895
149036
Gammaproteobacteria
CCA
Trp
>WENV182542801
OJAZ01002606
145261
Gammaproteobacteria
CAT
Met
>WENV182542622
OJAZ01000159
145366
Gammaproteobacteria
ACG
Arg
>WENV182542659
OJAZ01000339
16284
Gammaproteobacteria
TGA
Ser
>WENV182542990
OJAZ01012680
311624
Gammaproteobacteria
GTG
His
>WENV182542605
OJAZ01000059
145369
Gammaproteobacteria
CGG
Pro
>WENV182542593
OJAZ01000045
147054
Gammaproteobacteria
CAT
Met
>WENV182542745
OJAZ01001541
174801
Gammaproteobacteria
TGG
Pro
>WENV182542845
OJAZ01003840
146644
Gammaproteobacteria
GGG
Pro
>WENV182542876
OJAZ01005025
146644
Gammaproteobacteria
GGG
Pro
>WENV182542730
OJAZ01001218
45345
Gammaproteobacteria
GGA
Ser
>WENV182542796
OJAZ01002476
237221
Gammaproteobacteria
GGC
Ala
>WENV182542642
OJAZ01000209
99005
Gammaproteobacteria
GAG
Leu
>WENV182542872
OJAZ01004792
340801
Gammaproteobacteria
CCT
Arg
>WENV182542620
OJAZ01000130
241230
Gammaproteobacteria
GAA
Phe
>WENV182542628
OJAZ01000180
16394
Gammaproteobacteria
TGA
Ser
>WENV182542744
OJAZ01001469
59155
Gammaproteobacteria
TAA
Leu
>WENV182542604
OJAZ01000058
289927
Gammaproteobacteria
GAA
Phe
>WENV182542718
OJAZ01001033
289927
Gammaproteobacteria
GAA
Phe
>WENV182542595
OJAZ01000045
377319
Gammaproteobacteria
TTG
Gln
>WENV182542597
OJAZ01000045
377319
Gammaproteobacteria
TTG
Gln
>WENV182542699
OJAZ01000722
339596
Gammaproteobacteria
CCT
Arg
>WENV182542994
OJAZ01013224
339596
Gammaproteobacteria
CCT
Arg
>WENV182542860
OJAZ01004324
249995
Gammaproteobacteria
TTT
Lys
>WENV182542615
OJAZ01000082
6972
Gammaproteobacteria
>WENV182542581
OJAZ01000017
277901
Gammaproteobacteria
TGT
Thr
>WENV182542667
OJAZ01000412
277901
Gammaproteobacteria
TGT
Thr
>WENV182542851
OJAZ01004019
240197
Gammaproteobacteria
GTT
Asn
>WENV182542680
OJAZ01000615
149038
Gammaproteobacteria
TGG
Pro
>WENV182542684
OJAZ01000615
149038
Gammaproteobacteria
TGG
Pro
>WENV182542656
OJAZ01000329
23644
Gammaproteobacteria
GGA
Ser
>WENV182542616
OJAZ01000086
147057
Gammaproteobacteria
GAC
Val
>WENV182542645
OJAZ01000242
147055
Gammaproteobacteria
TGG
Pro
>WENV182542742
OJAZ01001469
237708
Gammaproteobacteria
GCC
Gly
>WENV182542857
OJAZ01004270
237220
Gammaproteobacteria
GTT
Asn
>WENV182542807
OJAZ01002791
240084
Gammaproteobacteria
GGT
Thr
>WENV182543047
OJAZ01021303
340988
Gammaproteobacteria
TTG
Gln
>WENV182542749
OJAZ01001629
319098
Gammaproteobacteria
TAC
Val
>WENV182542922
OJAZ01007441
149315
Gammaproteobacteria
GAC
Val
>WENV182542719
OJAZ01001074
108266
Gammaproteobacteria
GTA
Tyr
>WENV182542646
OJAZ01000245
147051
Gammaproteobacteria
CAT
Met
>WENV182542791
OJAZ01002350
77137
Gammaproteobacteria
TAA
Leu
>WENV182542579
OJAZ01000015
145365
Gammaproteobacteria
GAC
Val
>WENV182542753
OJAZ01001657
148452
Gammaproteobacteria
CCT
Arg
>WENV182542783
OJAZ01002196
241136
Gammaproteobacteria
TTG
Gln
>WENV182542955
OJAZ01010419
193275
Gammaproteobacteria
GAT
Ile
>WENV182542688
OJAZ01000644
341850
Gammaproteobacteria
TTG
Gln
>WENV182542566
OJAZ01000005
235886
Gammaproteobacteria
TTC
Glu
>WENV182542600
OJAZ01000054
235886
Gammaproteobacteria
TTC
Glu
>WENV182542635
OJAZ01000197
237712
Gammaproteobacteria
TGT
Thr
>WENV182542637
OJAZ01000197
237712
Gammaproteobacteria
TGT
Thr
>WENV182542671
OJAZ01000424
151889
Gammaproteobacteria
CAT
Met
>WENV182542709
OJAZ01000911
146642
Gammaproteobacteria
CCA
Trp
>WENV182542906
OJAZ01006583
146642
Gammaproteobacteria
CCA
Trp
>WENV182542681
OJAZ01000615
154796
Gammaproteobacteria
TCT
Arg
>WENV182542700
OJAZ01000743
339597
Gammaproteobacteria
CCG
Arg
>WENV182542743
OJAZ01001469
412217
Gammaproteobacteria
GCA
Cys
>WENV182542580
OJAZ01000015
243921
Gammaproteobacteria
TTT
Lys
>WENV182542582
OJAZ01000022
243921
Gammaproteobacteria
TTT
Lys
>WENV182542704
OJAZ01000872
19282
Gammaproteobacteria
TGA
Ser
>WENV182542829
OJAZ01003368
19282
Gammaproteobacteria
TGA
Ser
>WENV182542726
OJAZ01001174
149037
Gammaproteobacteria
GAC
Val
>WENV182542647
OJAZ01000246
411735
Gammaproteobacteria
GCA
Cys
>WENV182543000
OJAZ01013978
175964
Gammaproteobacteria
CAT
Met
>WENV182542624
OJAZ01000169
198797
Gammaproteobacteria
TGG
Pro
>WENV182542570
OJAZ01000008
150648
Gammaproteobacteria
TGG
Pro
>WENV182542980
OJAZ01012390
147050
Gammaproteobacteria
GAT
Ile
>WENV182542689
OJAZ01000668
147049
Gammaproteobacteria
GGG
Pro
>WENV182542911
OJAZ01007093
59485
Gammaproteobacteria
CAG
Leu
>WENV182542665
OJAZ01000404
22336
Gammaproteobacteria
GCT
Ser
>WENV182542606
OJAZ01000060
10850
Gammaproteobacteria
TGA
Ser
>WENV182543044
OJAZ01021276
190809
Gammaproteobacteria
GGG
Pro
>WENV182542594
OJAZ01000045
95974
Gammaproteobacteria
TAG
Leu
>WENV182542596
OJAZ01000045
95974
Gammaproteobacteria
TAG
Leu
>WENV182542636
OJAZ01000197
237711
Gammaproteobacteria
GAA
Phe
>WENV182542638
OJAZ01000197
237711
Gammaproteobacteria
GAA
Phe
>WENV182542655
OJAZ01000323
237711
Gammaproteobacteria
GAA
Phe
>WENV182542917
OJAZ01007387
273942
Gammaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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