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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
67 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182573632
OJFP01007527
146662
Gammaproteobacteria
GAC
Val
>WENV182573397
OJFP01001331
10780
Gammaproteobacteria
GCT
Ser
>WENV182573200
OJFP01000318
235887
Gammaproteobacteria
GTG
His
>WENV182573794
OJFP01035094
313881
Gammaproteobacteria
GGC
Ala
>WENV182573269
OJFP01000551
146646
Gammaproteobacteria
TGG
Pro
>WENV182573192
OJFP01000308
14613
Gammaproteobacteria
TGA
Ser
>WENV182573193
OJFP01000308
14613
Gammaproteobacteria
TGA
Ser
>WENV182573194
OJFP01000308
14613
Gammaproteobacteria
TGA
Ser
>WENV182573511
OJFP01002944
149065
Gammaproteobacteria
CCA
Trp
>WENV182573127
OJFP01000149
149066
Gammaproteobacteria
CAT
Met
>WENV182573151
OJFP01000193
279385
Gammaproteobacteria
TTT
Lys
>WENV182573486
OJFP01002468
238499
Gammaproteobacteria
TAC
Val
>WENV182573273
OJFP01000564
145368
Gammaproteobacteria
CCT
Arg
>WENV182573336
OJFP01000877
238438
Gammaproteobacteria
>WENV182573121
OJFP01000137
237225
Gammaproteobacteria
GCC
Gly
>WENV182573047
OJFP01000019
147053
Gammaproteobacteria
GTT
Asn
>WENV182573023
OJFP01000008
108171
Gammaproteobacteria
GTA
Tyr
>WENV182573428
OJFP01001721
145260
Gammaproteobacteria
CAT
Met
>WENV182573425
OJFP01001688
95866
Gammaproteobacteria
GTA
Tyr
>WENV182573284
OJFP01000616
145367
Gammaproteobacteria
GGG
Pro
>WENV182573207
OJFP01000332
185163
Gammaproteobacteria
ACG
Arg
>WENV182573495
OJFP01002802
240619
Gammaproteobacteria
TGT
Thr
>WENV182573328
OJFP01000826
149036
Gammaproteobacteria
CCA
Trp
>WENV182573338
OJFP01000897
149036
Gammaproteobacteria
CCA
Trp
>WENV182573153
OJFP01000200
145261
Gammaproteobacteria
CAT
Met
>WENV182573365
OJFP01001031
145366
Gammaproteobacteria
ACG
Arg
>WENV182573291
OJFP01000632
16284
Gammaproteobacteria
TGA
Ser
>WENV182573391
OJFP01001274
311624
Gammaproteobacteria
GTG
His
>WENV182573079
OJFP01000056
145369
Gammaproteobacteria
CGG
Pro
>WENV182573547
OJFP01003801
237425
Gammaproteobacteria
TTC
Glu
>WENV182573429
OJFP01001722
174801
Gammaproteobacteria
TGG
Pro
>WENV182573231
OJFP01000457
146644
Gammaproteobacteria
GGG
Pro
>WENV182573074
OJFP01000045
45345
Gammaproteobacteria
GGA
Ser
>WENV182573335
OJFP01000877
237221
Gammaproteobacteria
GGC
Ala
>WENV182573241
OJFP01000477
340801
Gammaproteobacteria
CCT
Arg
>WENV182573584
OJFP01004600
340801
Gammaproteobacteria
CCT
Arg
>WENV182573243
OJFP01000484
289927
Gammaproteobacteria
GAA
Phe
>WENV182573406
OJFP01001430
289927
Gammaproteobacteria
GAA
Phe
>WENV182573125
OJFP01000140
249995
Gammaproteobacteria
TTT
Lys
>WENV182573418
OJFP01001599
240197
Gammaproteobacteria
GTT
Asn
>WENV182573402
OJFP01001387
149038
Gammaproteobacteria
TGG
Pro
>WENV182573799
OJFP01037305
149038
Gammaproteobacteria
TGG
Pro
>WENV182573179
OJFP01000290
59830
Gammaproteobacteria
CAA
Leu
>WENV182573468
OJFP01002165
240084
Gammaproteobacteria
GGT
Thr
>WENV182573122
OJFP01000137
413604
Gammaproteobacteria
GCA
Cys
>WENV182573203
OJFP01000329
319098
Gammaproteobacteria
TAC
Val
>WENV182573220
OJFP01000370
149315
Gammaproteobacteria
GAC
Val
>WENV182573564
OJFP01004302
311863
Gammaproteobacteria
GGC
Ala
>WENV182573142
OJFP01000161
77137
Gammaproteobacteria
TAA
Leu
>WENV182573061
OJFP01000033
145365
Gammaproteobacteria
GAC
Val
>WENV182573339
OJFP01000898
148452
Gammaproteobacteria
CCT
Arg
>WENV182573586
OJFP01004692
241136
Gammaproteobacteria
TTG
Gln
>WENV182573769
OJFP01029540
341850
Gammaproteobacteria
TTG
Gln
>WENV182573217
OJFP01000364
235886
Gammaproteobacteria
TTC
Glu
>WENV182573398
OJFP01001331
193276
Gammaproteobacteria
ACG
Arg
>WENV182573060
OJFP01000033
243921
Gammaproteobacteria
TTT
Lys
>WENV182573609
OJFP01005723
182592
Gammaproteobacteria
GAC
Val
>WENV182573093
OJFP01000075
19282
Gammaproteobacteria
TGA
Ser
>WENV182573323
OJFP01000786
149037
Gammaproteobacteria
GAC
Val
>WENV182573329
OJFP01000836
411735
Gammaproteobacteria
GCA
Cys
>WENV182573128
OJFP01000149
100592
Gammaproteobacteria
TAG
Leu
>WENV182573198
OJFP01000318
198797
Gammaproteobacteria
TGG
Pro
>WENV182573126
OJFP01000140
45439
Gammaproteobacteria
GGA
Ser
>WENV182573123
OJFP01000137
67366
Gammaproteobacteria
TAA
Leu
>WENV182573206
OJFP01000332
22336
Gammaproteobacteria
GCT
Ser
>WENV182573073
OJFP01000045
273942
Gammaproteobacteria
GCC
Gly
>WENV182573492
OJFP01002680
73305
Gammaproteobacteria
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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