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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
101 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183055191
OLGX01000097
95975
Gammaproteobacteria
GAG
Leu
>WENV183055123
OLGX01000004
188516
Gammaproteobacteria
CAT
Met
>WENV183055337
OLGX01003252
149065
Gammaproteobacteria
CCA
Trp
>WENV183055146
OLGX01000021
147048
Gammaproteobacteria
CCA
Trp
>WENV183055170
OLGX01000045
147048
Gammaproteobacteria
CCA
Trp
>WENV183055173
OLGX01000054
115067
Gammaproteobacteria
GTA
Tyr
>WENV183055143
OLGX01000017
279385
Gammaproteobacteria
TTT
Lys
>WENV183055188
OLGX01000095
279385
Gammaproteobacteria
TTT
Lys
>WENV183055302
OLGX01001673
238499
Gammaproteobacteria
TAC
Val
>WENV183055272
OLGX01000759
145368
Gammaproteobacteria
CCT
Arg
>WENV183055142
OLGX01000016
95973
Gammaproteobacteria
CAA
Leu
>WENV183055124
OLGX01000004
248041
Gammaproteobacteria
GGC
Ala
>WENV183055282
OLGX01000969
58822
Gammaproteobacteria
CAA
Leu
>WENV183055234
OLGX01000259
17426
Gammaproteobacteria
GCT
Ser
>WENV183055115
OLGX01000001
147053
Gammaproteobacteria
GTT
Asn
>WENV183055183
OLGX01000086
147053
Gammaproteobacteria
GTT
Asn
>WENV183055299
OLGX01001569
145260
Gammaproteobacteria
CAT
Met
>WENV183055339
OLGX01003424
145367
Gammaproteobacteria
GGG
Pro
>WENV183055195
OLGX01000124
235452
Gammaproteobacteria
GAA
Phe
>WENV183055242
OLGX01000294
235452
Gammaproteobacteria
GAA
Phe
>WENV183055291
OLGX01001206
240619
Gammaproteobacteria
TGT
Thr
>WENV183055149
OLGX01000025
237710
Gammaproteobacteria
TTT
Lys
>WENV183055154
OLGX01000030
237709
Gammaproteobacteria
GTG
His
>WENV183055227
OLGX01000230
149036
Gammaproteobacteria
CCA
Trp
>WENV183055168
OLGX01000042
146791
Gammaproteobacteria
GAC
Val
>WENV183055335
OLGX01002923
146791
Gammaproteobacteria
GAC
Val
>WENV183055336
OLGX01002964
146791
Gammaproteobacteria
GAC
Val
>WENV183055355
OLGX01005209
148148
Gammaproteobacteria
GAC
Val
>WENV183055277
OLGX01000872
145366
Gammaproteobacteria
ACG
Arg
>WENV183055307
OLGX01002034
16284
Gammaproteobacteria
TGA
Ser
>WENV183055264
OLGX01000526
17329
Gammaproteobacteria
TGA
Ser
>WENV183055209
OLGX01000175
145369
Gammaproteobacteria
CGG
Pro
>WENV183055119
OLGX01000004
147054
Gammaproteobacteria
CAT
Met
>WENV183055222
OLGX01000224
174801
Gammaproteobacteria
TGG
Pro
>WENV183055202
OLGX01000145
45345
Gammaproteobacteria
GGA
Ser
>WENV183055121
OLGX01000004
349693
Gammaproteobacteria
TTG
Gln
>WENV183055303
OLGX01001780
340801
Gammaproteobacteria
CCT
Arg
>WENV183055167
OLGX01000040
241230
Gammaproteobacteria
GAA
Phe
>WENV183055113
OLGX01000001
16394
Gammaproteobacteria
TGA
Ser
>WENV183055147
OLGX01000024
16394
Gammaproteobacteria
TGA
Ser
>WENV183055231
OLGX01000234
59155
Gammaproteobacteria
TAA
Leu
>WENV183055136
OLGX01000014
243895
Gammaproteobacteria
>WENV183055138
OLGX01000014
243895
Gammaproteobacteria
>WENV183055219
OLGX01000206
243895
Gammaproteobacteria
>WENV183055122
OLGX01000004
339596
Gammaproteobacteria
CCT
Arg
>WENV183055114
OLGX01000001
97105
Gammaproteobacteria
GTA
Tyr
>WENV183055180
OLGX01000078
6972
Gammaproteobacteria
>WENV183055210
OLGX01000176
277901
Gammaproteobacteria
TGT
Thr
>WENV183055283
OLGX01001011
149038
Gammaproteobacteria
TGG
Pro
>WENV183055366
OLGX01009901
149038
Gammaproteobacteria
TGG
Pro
>WENV183055334
OLGX01002825
278046
Gammaproteobacteria
TGT
Thr
>WENV183055342
OLGX01004193
278046
Gammaproteobacteria
TGT
Thr
>WENV183055150
OLGX01000025
23644
Gammaproteobacteria
GGA
Ser
>WENV183055240
OLGX01000284
148442
Gammaproteobacteria
ACG
Arg
>WENV183055151
OLGX01000028
147057
Gammaproteobacteria
GAC
Val
>WENV183055301
OLGX01001579
59830
Gammaproteobacteria
CAA
Leu
>WENV183055134
OLGX01000013
147055
Gammaproteobacteria
TGG
Pro
>WENV183055229
OLGX01000234
237708
Gammaproteobacteria
GCC
Gly
>WENV183055333
OLGX01002565
149315
Gammaproteobacteria
GAC
Val
>WENV183055153
OLGX01000029
147051
Gammaproteobacteria
CAT
Met
>WENV183055280
OLGX01000944
145365
Gammaproteobacteria
GAC
Val
>WENV183055160
OLGX01000034
145713
Gammaproteobacteria
CAT
Met
>WENV183055204
OLGX01000147
249882
Gammaproteobacteria
GTT
Asn
>WENV183055215
OLGX01000190
148452
Gammaproteobacteria
CCT
Arg
>WENV183055186
OLGX01000090
241136
Gammaproteobacteria
TTG
Gln
>WENV183055187
OLGX01000094
341850
Gammaproteobacteria
TTG
Gln
>WENV183055284
OLGX01001043
235886
Gammaproteobacteria
TTC
Glu
>WENV183055140
OLGX01000016
237712
Gammaproteobacteria
TGT
Thr
>WENV183055262
OLGX01000469
151889
Gammaproteobacteria
CAT
Met
>WENV183055214
OLGX01000182
238372
Gammaproteobacteria
CCT
Arg
>WENV183055141
OLGX01000016
339597
Gammaproteobacteria
CCG
Arg
>WENV183055352
OLGX01004788
186449
Gammaproteobacteria
TGG
Pro
>WENV183055127
OLGX01000007
243485
Gammaproteobacteria
TGT
Thr
>WENV183055221
OLGX01000220
243485
Gammaproteobacteria
TGT
Thr
>WENV183055117
OLGX01000003
249892
Gammaproteobacteria
GTT
Asn
>WENV183055230
OLGX01000234
412217
Gammaproteobacteria
GCA
Cys
>WENV183055281
OLGX01000966
243921
Gammaproteobacteria
TTT
Lys
>WENV183055152
OLGX01000029
262546
Gammaproteobacteria
TGC
Ala
>WENV183055354
OLGX01004934
262546
Gammaproteobacteria
TGC
Ala
>WENV183055304
OLGX01001834
59658
Gammaproteobacteria
CAA
Leu
>WENV183055118
OLGX01000004
237713
Gammaproteobacteria
TAC
Val
>WENV183055261
OLGX01000465
149037
Gammaproteobacteria
GAC
Val
>WENV183055358
OLGX01005672
245151
Gammaproteobacteria
GTG
His
>WENV183055156
OLGX01000031
411735
Gammaproteobacteria
GCA
Cys
>WENV183055290
OLGX01001133
45411
Gammaproteobacteria
GGA
Ser
>WENV183055203
OLGX01000147
240536
Gammaproteobacteria
TTT
Lys
>WENV183055243
OLGX01000297
240536
Gammaproteobacteria
TTT
Lys
>WENV183055252
OLGX01000382
175964
Gammaproteobacteria
CAT
Met
>WENV183055254
OLGX01000407
150648
Gammaproteobacteria
TGG
Pro
>WENV183055175
OLGX01000054
236000
Gammaproteobacteria
GGT
Thr
>WENV183055193
OLGX01000103
277196
Gammaproteobacteria
GAA
Phe
>WENV183055373
OLGX01011482
45439
Gammaproteobacteria
GGA
Ser
>WENV183055148
OLGX01000025
147049
Gammaproteobacteria
GGG
Pro
>WENV183055372
OLGX01011424
67366
Gammaproteobacteria
TAA
Leu
>WENV183055207
OLGX01000157
59485
Gammaproteobacteria
CAG
Leu
>WENV183055177
OLGX01000061
10850
Gammaproteobacteria
TGA
Ser
>WENV183055178
OLGX01000061
10850
Gammaproteobacteria
TGA
Ser
>WENV183055296
OLGX01001297
10850
Gammaproteobacteria
TGA
Ser
>WENV183055120
OLGX01000004
95974
Gammaproteobacteria
TAG
Leu
>WENV183055294
OLGX01001206
239187
Gammaproteobacteria
GGT
Thr
>WENV183055139
OLGX01000016
237711
Gammaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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