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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
95 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183166985
OLOY01009236
243647
Bacillota
TTT
Lys
>WENV183166691
OLOY01000565
16842
Bacillota
CGA
Ser
>WENV183166777
OLOY01001047
238169
Bacillota
AGT
Thr
>WENV183167063
OLOY01026116
235693
Bacillota
GGT
Thr
>WENV183166637
OLOY01000410
235287
Bacillota
TTT
Lys
>WENV183166999
OLOY01011962
37222
Bacillota
>WENV183166671
OLOY01000495
338152
Bacillota
TTC
Glu
>WENV183166438
OLOY01000037
23769
Bacillota
TAA
Leu
>WENV183166939
OLOY01005024
44854
Bacillota
TGA
Ser
>WENV183166864
OLOY01001970
147691
Bacillota
GAT
Ile
>WENV183166787
OLOY01001095
16434
Bacillota
TGA
Ser
>WENV183166761
OLOY01000906
411591
Bacillota
GGT
Thr
>WENV183166776
OLOY01001042
59312
Bacillota
CAG
Leu
>WENV183167033
OLOY01020333
339684
Bacillota
CCG
Arg
>WENV183166803
OLOY01001211
238910
Bacillota
CTT
Lys
>WENV183166925
OLOY01004248
155273
Bacillota
CAT
Met
>WENV183166801
OLOY01001211
235294
Bacillota
TGC
Ala
>WENV183167012
OLOY01015197
235294
Bacillota
TGC
Ala
>WENV183166903
OLOY01002934
59201
Bacillota
CAG
Leu
>WENV183166899
OLOY01002830
412258
Bacillota
CCC
Gly
>WENV183166656
OLOY01000446
237265
Bacillota
TAC
Val
>WENV183166822
OLOY01001482
237265
Bacillota
TAC
Val
>WENV183166598
OLOY01000325
127105
Bacillota
GTG
His
>WENV183167078
OLOY01030293
342727
Bacillota
TTG
Gln
>WENV183166686
OLOY01000559
144668
Bacillota
GTC
Asp
>WENV183166879
OLOY01002207
10661
Bacillota
CGA
Ser
>WENV183167028
OLOY01019755
235091
Bacillota
CTT
Lys
>WENV183167051
OLOY01022289
10771
Bacillota
GGA
Ser
>WENV183166786
OLOY01001095
147475
Bacillota
CAT
Met
>WENV183166667
OLOY01000472
16834
Bacillota
GCT
Ser
>WENV183166885
OLOY01002507
96004
Bacillota
GTA
Tyr
>WENV183166908
OLOY01003011
11034
Bacillota
GGA
Ser
>WENV183166789
OLOY01001095
238151
Bacillota
>WENV183166636
OLOY01000410
235290
Bacillota
TTG
Gln
>WENV183167070
OLOY01027010
347453
Bacillota
TGT
Thr
>WENV183166751
OLOY01000858
114002
Bacillota
CAA
Leu
>WENV183166664
OLOY01000467
37437
Bacillota
TAA
Leu
>WENV183166932
OLOY01004802
235079
Bacillota
GAA
Phe
>WENV183166744
OLOY01000842
147481
Bacillota
CGG
Pro
>WENV183166446
OLOY01000037
147232
Bacillota
GTC
Asp
>WENV183166811
OLOY01001288
238677
Bacillota
AGT
Thr
>WENV183166812
OLOY01001288
238677
Bacillota
AGT
Thr
>WENV183166526
OLOY01000141
16266
Bacillota
GCT
Ser
>WENV183166881
OLOY01002329
16413
Bacillota
GCT
Ser
>WENV183166725
OLOY01000752
243612
Bacillota
TAC
Val
>WENV183167052
OLOY01022289
235617
Bacillota
TAC
Val
>WENV183167018
OLOY01016737
37269
Bacillota
TGA
Ser
>WENV183167021
OLOY01018057
339683
Bacillota
CTC
Glu
>WENV183166962
OLOY01007089
413152
Bacillota
TCC
Gly
>WENV183166718
OLOY01000741
152492
Bacillota
GGG
Pro
>WENV183166750
OLOY01000852
152492
Bacillota
GGG
Pro
>WENV183166739
OLOY01000827
147135
Bacillota
ACG
Arg
>WENV183166888
OLOY01002507
413204
Bacillota
GCA
Cys
>WENV183166884
OLOY01002461
237890
Bacillota
GGT
Thr
>WENV183166887
OLOY01002507
237892
Bacillota
GTG
His
>WENV183166639
OLOY01000410
240017
Bacillota
GCC
Gly
>WENV183166957
OLOY01006626
411547
Bacillota
CTG
Gln
>WENV183166406
OLOY01000013
147684
Bacillota
ACG
Arg
>WENV183166625
OLOY01000388
147684
Bacillota
ACG
Arg
>WENV183166861
OLOY01001964
147684
Bacillota
ACG
Arg
>WENV183166940
OLOY01005024
4624
Bacillota
GCT
Ser
>WENV183166867
OLOY01002067
342895
Bacillota
CAT
Met
>WENV183166768
OLOY01000987
412387
Bacillota
GCA
Cys
>WENV183167072
OLOY01027010
411584
Bacillota
TCC
Gly
>WENV183166935
OLOY01004803
235095
Bacillota
GGT
Thr
>WENV183167042
OLOY01021321
150597
Bacillota
TCT
Arg
>WENV183166689
OLOY01000564
250349
Bacillota
GAA
Phe
>WENV183167069
OLOY01027010
235289
Bacillota
GTT
Asn
>WENV183167008
OLOY01013743
235925
Bacillota
TGC
Ala
>WENV183166785
OLOY01001095
146741
Bacillota
CAT
Met
>WENV183166749
OLOY01000848
59296
Bacillota
AAG
Leu
>WENV183167022
OLOY01018057
237893
Bacillota
CTG
Gln
>WENV183166969
OLOY01007341
148188
Bacillota
CCG
Arg
>WENV183166960
OLOY01006695
80612
Bacillota
GTA
Tyr
>WENV183166529
OLOY01000148
235127
Bacillota
TTT
Lys
>WENV183166688
OLOY01000564
235197
Bacillota
GTC
Asp
>WENV183167044
OLOY01021321
235905
Bacillota
GTG
His
>WENV183167041
OLOY01021321
411739
Bacillota
TCC
Gly
>WENV183167046
OLOY01021321
237963
Bacillota
TTT
Lys
>WENV183166983
OLOY01009236
243613
Bacillota
GTG
His
>WENV183167034
OLOY01020526
144583
Bacillota
ACG
Arg
>WENV183167064
OLOY01026116
152491
Bacillota
CAT
Met
>WENV183166955
OLOY01006148
58712
Bacillota
CAG
Leu
>WENV183166635
OLOY01000410
144762
Bacillota
TCT
Arg
>WENV183166549
OLOY01000208
59664
Bacillota
CAG
Leu
>WENV183166550
OLOY01000209
59664
Bacillota
CAG
Leu
>WENV183166551
OLOY01000209
59664
Bacillota
CAG
Leu
>WENV183166949
OLOY01005504
237894
Bacillota
CGT
Thr
>WENV183166980
OLOY01008820
413657
Bacillota
CCC
Gly
>WENV183166886
OLOY01002507
412118
Bacillota
>WENV183167037
OLOY01021139
119513
Bacillota
CAA
Leu
>WENV183166878
OLOY01002175
238945
Bacillota
GCC
Gly
>WENV183166933
OLOY01004802
249259
Bacillota
GCC
Gly
>WENV183166984
OLOY01009236
343027
Bacillota
TTG
Gln
>WENV183166922
OLOY01004152
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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