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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
151 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183705919
PDWI01002594
161528
Campylobacterota
CAT
Met
>WENV183709307
PDWI01026805
161528
Campylobacterota
CAT
Met
>WENV183715224
PDWI01228410
161528
Campylobacterota
CAT
Met
>WENV183715637
PDWI01252148
161528
Campylobacterota
CAT
Met
>WENV183714575
PDWI01192399
253656
Campylobacterota
CCA
Trp
>WENV183714684
PDWI01197760
253656
Campylobacterota
CCA
Trp
>WENV183715938
PDWI01275577
253656
Campylobacterota
CCA
Trp
>WENV183704877
PDWI01000720
16571
Campylobacterota
GCT
Ser
>WENV183705031
PDWI01000924
16571
Campylobacterota
GCT
Ser
>WENV183706122
PDWI01003137
16571
Campylobacterota
GCT
Ser
>WENV183705137
PDWI01001119
155988
Campylobacterota
TCT
Arg
>WENV183705176
PDWI01001185
186521
Campylobacterota
TCT
Arg
>WENV183705178
PDWI01001185
186521
Campylobacterota
TCT
Arg
>WENV183704798
PDWI01000643
241532
Campylobacterota
GAC
Val
>WENV183709980
PDWI01037532
241532
Campylobacterota
GAC
Val
>WENV183707069
PDWI01006585
358584
Campylobacterota
TTC
Glu
>WENV183707073
PDWI01006585
358584
Campylobacterota
TTC
Glu
>WENV183714098
PDWI01168230
358584
Campylobacterota
TTC
Glu
>WENV183714101
PDWI01168230
358584
Campylobacterota
TTC
Glu
>WENV183711401
PDWI01068739
161529
Campylobacterota
CAT
Met
>WENV183713950
PDWI01160280
161529
Campylobacterota
CAT
Met
>WENV183707071
PDWI01006585
191925
Campylobacterota
GTC
Asp
>WENV183710813
PDWI01053886
191925
Campylobacterota
GTC
Asp
>WENV183710816
PDWI01053886
191925
Campylobacterota
GTC
Asp
>WENV183712059
PDWI01087276
191925
Campylobacterota
GTC
Asp
>WENV183714099
PDWI01168230
191925
Campylobacterota
GTC
Asp
>WENV183714103
PDWI01168230
191925
Campylobacterota
GTC
Asp
>WENV183715141
PDWI01223422
191925
Campylobacterota
GTC
Asp
>WENV183715788
PDWI01263155
191925
Campylobacterota
GTC
Asp
>WENV183706329
PDWI01003770
355138
Campylobacterota
GCC
Gly
>WENV183705522
PDWI01001717
147836
Campylobacterota
TCT
Arg
>WENV183715017
PDWI01217088
338365
Campylobacterota
GGT
Thr
>WENV183704541
PDWI01000346
338365
Campylobacterota
GGT
Thr
>WENV183705281
PDWI01001322
338365
Campylobacterota
GGT
Thr
>WENV183705764
PDWI01002219
338365
Campylobacterota
GGT
Thr
>WENV183711135
PDWI01061823
338365
Campylobacterota
GGT
Thr
>WENV183711433
PDWI01069532
338365
Campylobacterota
GGT
Thr
>WENV183711882
PDWI01083082
338365
Campylobacterota
GGT
Thr
>WENV183712132
PDWI01089993
338365
Campylobacterota
GGT
Thr
>WENV183712435
PDWI01099848
338365
Campylobacterota
GGT
Thr
>WENV183712796
PDWI01114129
338365
Campylobacterota
GGT
Thr
>WENV183712836
PDWI01115571
338365
Campylobacterota
GGT
Thr
>WENV183714660
PDWI01196684
338365
Campylobacterota
GGT
Thr
>WENV183704530
PDWI01000338
340892
Campylobacterota
GTT
Asn
>WENV183705103
PDWI01001041
340892
Campylobacterota
GTT
Asn
>WENV183705760
PDWI01002219
340892
Campylobacterota
GTT
Asn
>WENV183708306
PDWI01014579
340892
Campylobacterota
GTT
Asn
>WENV183709149
PDWI01024618
340892
Campylobacterota
GTT
Asn
>WENV183711270
PDWI01064874
340892
Campylobacterota
GTT
Asn
>WENV183712767
PDWI01113104
340892
Campylobacterota
GTT
Asn
>WENV183712225
PDWI01092816
152142
Campylobacterota
GAT
Ile
>WENV183715945
PDWI01276015
149512
Campylobacterota
GAT
Ile
>WENV183716375
PDWI01304785
149512
Campylobacterota
GAT
Ile
>WENV183706971
PDWI01006156
149517
Campylobacterota
TGT
Thr
>WENV183708307
PDWI01014581
149517
Campylobacterota
TGT
Thr
>WENV183708824
PDWI01020239
149517
Campylobacterota
TGT
Thr
>WENV183710992
PDWI01058138
149517
Campylobacterota
TGT
Thr
>WENV183711409
PDWI01069034
149517
Campylobacterota
TGT
Thr
>WENV183713317
PDWI01133910
149517
Campylobacterota
TGT
Thr
>WENV183714266
PDWI01175657
149517
Campylobacterota
TGT
Thr
>WENV183709796
PDWI01034288
127427
Campylobacterota
TGG
Pro
>WENV183712116
PDWI01089577
127427
Campylobacterota
TGG
Pro
>WENV183715462
PDWI01241983
127427
Campylobacterota
TGG
Pro
>WENV183705445
PDWI01001580
149516
Campylobacterota
CAT
Met
>WENV183714432
PDWI01183610
149516
Campylobacterota
CAT
Met
>WENV183715227
PDWI01228410
149516
Campylobacterota
CAT
Met
>WENV183706938
PDWI01006007
61323
Campylobacterota
TAA
Leu
>WENV183708160
PDWI01013449
61323
Campylobacterota
TAA
Leu
>WENV183709587
PDWI01030560
61323
Campylobacterota
TAA
Leu
>WENV183709782
PDWI01033986
61323
Campylobacterota
TAA
Leu
>WENV183709842
PDWI01035171
61323
Campylobacterota
TAA
Leu
>WENV183710365
PDWI01045097
61323
Campylobacterota
TAA
Leu
>WENV183710926
PDWI01056737
61323
Campylobacterota
TAA
Leu
>WENV183710929
PDWI01056737
61323
Campylobacterota
TAA
Leu
>WENV183711132
PDWI01061783
61323
Campylobacterota
TAA
Leu
>WENV183711484
PDWI01070957
61323
Campylobacterota
TAA
Leu
>WENV183712266
PDWI01094073
61323
Campylobacterota
TAA
Leu
>WENV183713067
PDWI01123035
61323
Campylobacterota
TAA
Leu
>WENV183713171
PDWI01127668
61323
Campylobacterota
TAA
Leu
>WENV183713197
PDWI01128715
61323
Campylobacterota
TAA
Leu
>WENV183713499
PDWI01141086
61323
Campylobacterota
TAA
Leu
>WENV183714903
PDWI01210317
61323
Campylobacterota
TAA
Leu
>WENV183715309
PDWI01232665
61323
Campylobacterota
TAA
Leu
>WENV183715328
PDWI01233641
61323
Campylobacterota
TAA
Leu
>WENV183715456
PDWI01241734
61323
Campylobacterota
TAA
Leu
>WENV183716055
PDWI01283152
61323
Campylobacterota
TAA
Leu
>WENV183716076
PDWI01284489
61323
Campylobacterota
TAA
Leu
>WENV183714252
PDWI01175199
187751
Campylobacterota
TCT
Arg
>WENV183704485
PDWI01000300
250410
Campylobacterota
TTT
Lys
>WENV183708225
PDWI01013993
189231
Campylobacterota
TCT
Arg
>WENV183708435
PDWI01016013
189231
Campylobacterota
TCT
Arg
>WENV183711393
PDWI01068549
189231
Campylobacterota
TCT
Arg
>WENV183711515
PDWI01071737
189231
Campylobacterota
TCT
Arg
>WENV183712739
PDWI01111989
189231
Campylobacterota
TCT
Arg
>WENV183706972
PDWI01006156
377610
Campylobacterota
TTG
Gln
>WENV183708157
PDWI01013449
377610
Campylobacterota
TTG
Gln
>WENV183708308
PDWI01014581
377610
Campylobacterota
TTG
Gln
>WENV183708825
PDWI01020239
377610
Campylobacterota
TTG
Gln
>WENV183709536
PDWI01029528
377610
Campylobacterota
TTG
Gln
>WENV183710989
PDWI01058063
377610
Campylobacterota
TTG
Gln
>WENV183712172
PDWI01091160
377610
Campylobacterota
TTG
Gln
>WENV183712832
PDWI01115536
377610
Campylobacterota
TTG
Gln
>WENV183712970
PDWI01120341
377610
Campylobacterota
TTG
Gln
>WENV183714267
PDWI01175657
377610
Campylobacterota
TTG
Gln
>WENV183714804
PDWI01204016
377610
Campylobacterota
TTG
Gln
>WENV183715863
PDWI01268806
377610
Campylobacterota
TTG
Gln
>WENV183716040
PDWI01282519
377610
Campylobacterota
TTG
Gln
>WENV183705920
PDWI01002594
157046
Campylobacterota
TCC
Gly
>WENV183706998
PDWI01006244
157046
Campylobacterota
TCC
Gly
>WENV183708257
PDWI01014120
157046
Campylobacterota
TCC
Gly
>WENV183708546
PDWI01017315
157046
Campylobacterota
TCC
Gly
>WENV183708875
PDWI01020865
157046
Campylobacterota
TCC
Gly
>WENV183709056
PDWI01023370
157046
Campylobacterota
TCC
Gly
>WENV183709308
PDWI01026805
157046
Campylobacterota
TCC
Gly
>WENV183710217
PDWI01041807
157046
Campylobacterota
TCC
Gly
>WENV183711616
PDWI01074868
157046
Campylobacterota
TCC
Gly
>WENV183713334
PDWI01134624
157046
Campylobacterota
TCC
Gly
>WENV183715225
PDWI01228410
157046
Campylobacterota
TCC
Gly
>WENV183715337
PDWI01234029
157046
Campylobacterota
TCC
Gly
>WENV183716369
PDWI01304412
157046
Campylobacterota
TCC
Gly
>WENV183710815
PDWI01053886
273229
Campylobacterota
TAC
Val
>WENV183712969
PDWI01120341
154128
Campylobacterota
TGT
Thr
>WENV183714803
PDWI01204016
154128
Campylobacterota
TGT
Thr
>WENV183705284
PDWI01001322
247550
Campylobacterota
TAC
Val
>WENV183710955
PDWI01057284
247550
Campylobacterota
TAC
Val
>WENV183713948
PDWI01160223
247550
Campylobacterota
TAC
Val
>WENV183713356
PDWI01135362
338447
Campylobacterota
TTC
Glu
>WENV183713962
PDWI01161253
338447
Campylobacterota
TTC
Glu
>WENV183715554
PDWI01246573
338447
Campylobacterota
TTC
Glu
>WENV183704531
PDWI01000338
338447
Campylobacterota
TTC
Glu
>WENV183705277
PDWI01001318
338447
Campylobacterota
TTC
Glu
>WENV183705537
PDWI01001785
338447
Campylobacterota
TTC
Glu
>WENV183705617
PDWI01001977
338447
Campylobacterota
TTC
Glu
>WENV183706346
PDWI01003852
338447
Campylobacterota
TTC
Glu
>WENV183708252
PDWI01014100
338447
Campylobacterota
TTC
Glu
>WENV183708747
PDWI01019418
338447
Campylobacterota
TTC
Glu
>WENV183709118
PDWI01024067
338447
Campylobacterota
TTC
Glu
>WENV183710306
PDWI01043868
338447
Campylobacterota
TTC
Glu
>WENV183710322
PDWI01044057
338447
Campylobacterota
TTC
Glu
>WENV183711220
PDWI01063557
338447
Campylobacterota
TTC
Glu
>WENV183711297
PDWI01065411
338447
Campylobacterota
TTC
Glu
>WENV183711353
PDWI01067516
338447
Campylobacterota
TTC
Glu
>WENV183712773
PDWI01113276
338447
Campylobacterota
TTC
Glu
>WENV183710814
PDWI01053886
254398
Campylobacterota
TTT
Lys
>WENV183707068
PDWI01006585
254398
Campylobacterota
TTT
Lys
>WENV183707072
PDWI01006585
254398
Campylobacterota
TTT
Lys
>WENV183709752
PDWI01033201
254398
Campylobacterota
TTT
Lys
>WENV183710156
PDWI01040711
254398
Campylobacterota
TTT
Lys
>WENV183714100
PDWI01168230
254398
Campylobacterota
TTT
Lys
>WENV183714544
PDWI01189752
254398
Campylobacterota
TTT
Lys
>WENV183708159
PDWI01013449
249181
Campylobacterota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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