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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183742124
PJUH01000390
416655
Bacteroidota
>WENV183742154
PJUH01000744
238673
Bacteroidota
GAA
Phe
>WENV183742155
PJUH01000744
238673
Bacteroidota
GAA
Phe
>WENV183742047
PJUH01000106
146962
Bacteroidota
CAT
Met
>WENV183742065
PJUH01000136
165001
Bacteroidota
GTT
Asn
>WENV183742066
PJUH01000136
165001
Bacteroidota
GTT
Asn
>WENV183741943
PJUH01000012
412419
Bacteroidota
CCA
Trp
>WENV183742009
PJUH01000043
61800
Bacteroidota
TAA
Leu
>WENV183741888
PJUH01000002
147867
Bacteroidota
GTG
His
>WENV183741889
PJUH01000002
147867
Bacteroidota
GTG
His
>WENV183741978
PJUH01000024
147864
Bacteroidota
TGG
Pro
>WENV183741979
PJUH01000024
147864
Bacteroidota
TGG
Pro
>WENV183741980
PJUH01000024
147864
Bacteroidota
TGG
Pro
>WENV183742017
PJUH01000059
147942
Bacteroidota
GTC
Asp
>WENV183742018
PJUH01000059
147942
Bacteroidota
GTC
Asp
>WENV183742019
PJUH01000059
147942
Bacteroidota
GTC
Asp
>WENV183741891
PJUH01000002
45276
Bacteroidota
TGA
Ser
>WENV183742045
PJUH01000103
45276
Bacteroidota
TGA
Ser
>WENV183742046
PJUH01000103
45276
Bacteroidota
TGA
Ser
>WENV183741892
PJUH01000002
119517
Bacteroidota
CAA
Leu
>WENV183741957
PJUH01000017
119517
Bacteroidota
CAA
Leu
>WENV183741955
PJUH01000017
51937
Bacteroidota
TAA
Leu
>WENV183742043
PJUH01000103
51937
Bacteroidota
TAA
Leu
>WENV183742038
PJUH01000096
238872
Bacteroidota
TTT
Lys
>WENV183742040
PJUH01000096
238872
Bacteroidota
TTT
Lys
>WENV183742041
PJUH01000096
238872
Bacteroidota
TTT
Lys
>WENV183741988
PJUH01000028
235817
Bacteroidota
GAA
Phe
>WENV183741931
PJUH01000010
59351
Bacteroidota
GAG
Leu
>WENV183742251
PJUH01003867
278595
Bacteroidota
CAT
Met
>WENV183742252
PJUH01003867
278595
Bacteroidota
CAT
Met
>WENV183742030
PJUH01000084
25279
Bacteroidota
GGA
Ser
>WENV183742171
PJUH01000914
127221
Bacteroidota
TAC
Val
>WENV183742175
PJUH01001045
268513
Bacteroidota
TCC
Gly
>WENV183742378
PJUH01018048
268513
Bacteroidota
TCC
Gly
>WENV183741941
PJUH01000012
267805
Bacteroidota
TCC
Gly
>WENV183742184
PJUH01001161
168744
Bacteroidota
GTG
His
>WENV183742176
PJUH01001045
340152
Bacteroidota
GGT
Thr
>WENV183742377
PJUH01018048
113760
Bacteroidota
GTA
Tyr
>WENV183742049
PJUH01000109
176247
Bacteroidota
TCT
Arg
>WENV183742096
PJUH01000243
176247
Bacteroidota
TCT
Arg
>WENV183742147
PJUH01000596
119530
Bacteroidota
CAA
Leu
>WENV183742102
PJUH01000274
428524
Bacteroidota
GCA
Cys
>WENV183741919
PJUH01000008
127215
Bacteroidota
TAC
Val
>WENV183741921
PJUH01000008
127215
Bacteroidota
TAC
Val
>WENV183742090
PJUH01000228
340605
Bacteroidota
TTC
Glu
>WENV183742091
PJUH01000228
340605
Bacteroidota
TTC
Glu
>WENV183741922
PJUH01000008
238600
Bacteroidota
CAT
Met
>WENV183741923
PJUH01000008
238600
Bacteroidota
CAT
Met
>WENV183741994
PJUH01000034
238600
Bacteroidota
CAT
Met
>WENV183742442
PJUH01035192
238600
Bacteroidota
CAT
Met
>WENV183742443
PJUH01035192
238600
Bacteroidota
CAT
Met
>WENV183742449
PJUH01035265
238600
Bacteroidota
CAT
Met
>WENV183742450
PJUH01035265
238600
Bacteroidota
CAT
Met
>WENV183741942
PJUH01000012
342824
Bacteroidota
GGT
Thr
>WENV183741929
PJUH01000010
199370
Bacteroidota
GTT
Asn
>WENV183742110
PJUH01000309
412441
Bacteroidota
TTG
Gln
>WENV183742219
PJUH01002050
412441
Bacteroidota
TTG
Gln
>WENV183741920
PJUH01000008
126680
Bacteroidota
TAC
Val
>WENV183741981
PJUH01000024
411719
Bacteroidota
GCA
Cys
>WENV183742008
PJUH01000043
238670
Bacteroidota
GCC
Gly
>WENV183742333
PJUH01009896
54270
Bacteroidota
TGA
Ser
>WENV183742122
PJUH01000390
148163
Bacteroidota
TTT
Lys
>WENV183742387
PJUH01021110
148318
Bacteroidota
GTT
Asn
>WENV183741886
PJUH01000002
235822
Bacteroidota
TGT
Thr
>WENV183741939
PJUH01000012
235822
Bacteroidota
TGT
Thr
>WENV183742172
PJUH01000914
139214
Bacteroidota
TAC
Val
>WENV183741976
PJUH01000024
147863
Bacteroidota
CAT
Met
>WENV183741977
PJUH01000024
147863
Bacteroidota
CAT
Met
>WENV183742127
PJUH01000390
366237
Bacteroidota
GTT
Asn
>WENV183742185
PJUH01001164
412494
Bacteroidota
CCA
Trp
>WENV183742094
PJUH01000243
45935
Bacteroidota
GCT
Ser
>WENV183742039
PJUH01000096
82649
Bacteroidota
GAG
Leu
>WENV183742007
PJUH01000043
96124
Bacteroidota
TAG
Leu
>WENV183742010
PJUH01000043
96124
Bacteroidota
TAG
Leu
>WENV183741885
PJUH01000002
237427
Bacteroidota
TGT
Thr
>WENV183741887
PJUH01000002
237427
Bacteroidota
TGT
Thr
>WENV183742116
PJUH01000352
340028
Bacteroidota
TTC
Glu
>WENV183742113
PJUH01000320
179613
Bacteroidota
CAT
Met
>WENV183742283
PJUH01006013
147941
Bacteroidota
TGT
Thr
>WENV183742376
PJUH01018048
147941
Bacteroidota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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