This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1004037
SRR002328.109162
293915
Betaproteobacteria
GTT
Asn
>SRA1003989
SRR002328.78347
45127
Betaproteobacteria
CGA
Ser
>SRA1004189
SRR002328.190446
199861
Betaproteobacteria
CAT
Met
>SRA1004238
SRR002328.216529
199861
Betaproteobacteria
CAT
Met
>SRA1004304
SRR002328.258734
199861
Betaproteobacteria
CAT
Met
>SRA1004083
SRR002328.137283
61237
Betaproteobacteria
TAG
Leu
>SRA1004182
SRR002328.187009
412167
Betaproteobacteria
GCA
Cys
>SRA1004186
SRR002328.189655
412167
Betaproteobacteria
GCA
Cys
>SRA1004033
SRR002328.105765
154591
Betaproteobacteria
CAT
Met
>SRA1004158
SRR002328.176774
154591
Betaproteobacteria
CAT
Met
>SRA1003885
SRR002328.7891
152292
Betaproteobacteria
TTG
Gln
>SRA1004034
SRR002328.106513
152292
Betaproteobacteria
TTG
Gln
>SRA1003968
SRR002328.63250
283971
Betaproteobacteria
TAC
Val
>SRA1003993
SRR002328.81942
245575
Betaproteobacteria
CGT
Thr
>SRA1003939
SRR002328.50074
251462
Betaproteobacteria
GCC
Gly
>SRA1003948
SRR002328.56313
147666
Betaproteobacteria
CAT
Met
>SRA1003998
SRR002328.89399
239140
Betaproteobacteria
TTT
Lys
>SRA1004137
SRR002328.167224
239140
Betaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK