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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV078166
AAFZ01001914
400515
Alphaproteobacteria
GAC
Val
>WENV078183
AAFZ01004309
446430
Alphaproteobacteria
CAC
Val
>WENV078185
AAFZ01004441
179768
Alphaproteobacteria
TGG
Pro
>WENV078189
AAFZ01005214
482973
Alphaproteobacteria
TCC
Gly
>WENV078191
AAFZ01005319
460338
Alphaproteobacteria
TTG
Gln
>WENV078201
AAFZ01007080
398996
Alphaproteobacteria
GCC
Gly
>WENV078213
AAFZ01008290
199130
Alphaproteobacteria
GAT
Ile
>WENV078215
AAFZ01009233
193463
Alphaproteobacteria
CCT
Arg
>WENV078236
AAFZ01012683
432384
Alphaproteobacteria
GGT
Thr
>WENV078238
AAFZ01013290
229804
Alphaproteobacteria
GTC
Asp
>WENV078246
AAFZ01014119
140876
Alphaproteobacteria
>WENV078256
AAFZ01016018
118147
Alphaproteobacteria
CAA
Leu
>WENV078278
AAFZ01020294
399001
Alphaproteobacteria
GAC
Val
>WENV078287
AAFZ01021297
299509
Alphaproteobacteria
GTT
Asn
>WENV078288
AAFZ01021599
32398
Alphaproteobacteria
CGA
Ser
>WENV078292
AAFZ01021927
413432
Alphaproteobacteria
GGT
Thr
>WENV078309
AAFZ01024480
400384
Alphaproteobacteria
TTC
Glu
>WENV078319
AAFZ01026301
400514
Alphaproteobacteria
TTG
Gln
>WENV078322
AAFZ01026399
178733
Alphaproteobacteria
CAT
Met
>WENV078323
AAFZ01026463
320046
Alphaproteobacteria
CGT
Thr
>WENV078330
AAFZ01027412
143406
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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