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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170016511
AZIK01011344
73123
Gammaproteobacteria
CAA
Leu
>WENV170016380
AZIK01001940
184784
Gammaproteobacteria
TGG
Pro
>WENV170016520
AZIK01011533
480941
Gammaproteobacteria
TCC
Gly
>WENV170016457
AZIK01006394
281275
Gammaproteobacteria
TGT
Thr
>WENV170016408
AZIK01003478
20273
Gammaproteobacteria
TGA
Ser
>WENV170016336
AZIK01000327
180053
Gammaproteobacteria
CAT
Met
>WENV170016474
AZIK01008045
73863
Gammaproteobacteria
CAG
Leu
>WENV170016390
AZIK01002464
120827
Gammaproteobacteria
GAG
Leu
>WENV170016409
AZIK01003484
290068
Gammaproteobacteria
TTT
Lys
>WENV170016437
AZIK01005084
290068
Gammaproteobacteria
TTT
Lys
>WENV170016438
AZIK01005084
290068
Gammaproteobacteria
TTT
Lys
>WENV170016485
AZIK01009156
290068
Gammaproteobacteria
TTT
Lys
>WENV170016486
AZIK01009156
290068
Gammaproteobacteria
TTT
Lys
>WENV170016459
AZIK01006394
399250
Gammaproteobacteria
TCC
Gly
>WENV170016519
AZIK01011533
140925
Gammaproteobacteria
GTA
Tyr
>WENV170016358
AZIK01001046
281282
Gammaproteobacteria
TTC
Glu
>WENV170016536
AZIK01012381
281282
Gammaproteobacteria
TTC
Glu
>WENV170016433
AZIK01004807
176663
Gammaproteobacteria
GGG
Pro
>WENV170016429
AZIK01004519
480516
Gammaproteobacteria
GCA
Cys
>WENV170016374
AZIK01001905
480516
Gammaproteobacteria
GCA
Cys
>WENV170016351
AZIK01000769
181513
Gammaproteobacteria
TGG
Pro
>WENV170016488
AZIK01009156
181513
Gammaproteobacteria
TGG
Pro
>WENV170016334
AZIK01000303
280812
Gammaproteobacteria
GAA
Phe
>WENV170016475
AZIK01008046
280812
Gammaproteobacteria
GAA
Phe
>WENV170016355
AZIK01000770
178169
Gammaproteobacteria
GAC
Val
>WENV170016362
AZIK01001216
284115
Gammaproteobacteria
TAC
Val
>WENV170016344
AZIK01000769
284865
Gammaproteobacteria
>WENV170016514
AZIK01011467
284865
Gammaproteobacteria
>WENV170016526
AZIK01011586
296684
Gammaproteobacteria
GGT
Thr
>WENV170016359
AZIK01001103
56623
Gammaproteobacteria
GGA
Ser
>WENV170016462
AZIK01006644
176665
Gammaproteobacteria
CGG
Pro
>WENV170016397
AZIK01002829
402011
Gammaproteobacteria
TCC
Gly
>WENV170016487
AZIK01009156
296680
Gammaproteobacteria
GTT
Asn
>WENV170016354
AZIK01000769
296680
Gammaproteobacteria
GTT
Asn
>WENV170016460
AZIK01006394
296808
Gammaproteobacteria
GGT
Thr
>WENV170016382
AZIK01001940
281283
Gammaproteobacteria
GTG
His
>WENV170016421
AZIK01004246
176478
Gammaproteobacteria
CAT
Met
>WENV170016524
AZIK01011586
141076
Gammaproteobacteria
GTA
Tyr
>WENV170016518
AZIK01011533
282902
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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