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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170023206
BCQK01157307
13673
Bacillota
GCT
Ser
>WENV170022945
BCQK01083117
289824
Bacillota
CCG
Arg
>WENV170022616
BCQK01026944
20953
Bacillota
GGA
Ser
>WENV170022179
BCQK01001291
184592
Bacillota
TCT
Arg
>WENV170022532
BCQK01018547
141211
Bacillota
GTA
Tyr
>WENV170022761
BCQK01046195
73739
Bacillota
TAA
Leu
>WENV170022762
BCQK01046195
179493
Bacillota
ACG
Arg
>WENV170022206
BCQK01001614
20521
Bacillota
TGA
Ser
>WENV170022394
BCQK01008986
280547
Bacillota
GTC
Asp
>WENV170022531
BCQK01018547
284334
Bacillota
TGT
Thr
>WENV170022760
BCQK01046195
284334
Bacillota
TGT
Thr
>WENV170022325
BCQK01005362
289825
Bacillota
GAC
Val
>WENV170022528
BCQK01018434
289825
Bacillota
GAC
Val
>WENV170022533
BCQK01018547
482616
Bacillota
CCA
Trp
>WENV170023051
BCQK01112311
289822
Bacillota
TTT
Lys
>WENV170022535
BCQK01018547
404116
Bacillota
TTG
Gln
>WENV170022534
BCQK01018547
290481
Bacillota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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