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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170576171
FRDC01000003
106524
Alphaproteobacteria
GTA
Tyr
>WENV170576179
FRDC01000032
317915
Alphaproteobacteria
GAA
Phe
>WENV170576199
FRDC01000075
29655
Alphaproteobacteria
TGA
Ser
>WENV170576216
FRDC01000151
334836
Alphaproteobacteria
>WENV170576222
FRDC01000167
29655
Alphaproteobacteria
TGA
Ser
>WENV170576291
FRDC01000339
480900
Alphaproteobacteria
GCA
Cys
>WENV170576408
FRDC01000560
35980
Alphaproteobacteria
CGA
Ser
>WENV170576449
FRDC01000615
480900
Alphaproteobacteria
GCA
Cys
>WENV170576450
FRDC01000627
293747
Alphaproteobacteria
CTT
Lys
>WENV170576523
FRDC01000799
178246
Alphaproteobacteria
TCT
Arg
>WENV170576522
FRDC01000799
178252
Alphaproteobacteria
TGG
Pro
>WENV170576540
FRDC01000847
406803
Alphaproteobacteria
TTG
Gln
>WENV170576539
FRDC01000847
400029
Alphaproteobacteria
GGT
Thr
>WENV170576574
FRDC01000954
480958
Alphaproteobacteria
CTG
Gln
>WENV170576651
FRDC01001269
400214
Alphaproteobacteria
>WENV170576739
FRDC01001637
118147
Alphaproteobacteria
CAA
Leu
>WENV170576885
FRDC01002003
195438
Alphaproteobacteria
GAT
Ile
>WENV170576894
FRDC01002079
282748
Alphaproteobacteria
CGT
Thr
>WENV170576900
FRDC01002086
118146
Alphaproteobacteria
GAG
Leu
>WENV170576906
FRDC01002136
100383
Alphaproteobacteria
GTA
Tyr
>WENV170576982
FRDC01002537
427571
Alphaproteobacteria
GCC
Gly
>WENV170577029
FRDC01002814
282966
Alphaproteobacteria
TTT
Lys
>WENV170577027
FRDC01002814
399879
Alphaproteobacteria
GTT
Asn
>WENV170577026
FRDC01002814
480960
Alphaproteobacteria
GCA
Cys
>WENV170577088
FRDC01003082
202191
Alphaproteobacteria
CCG
Arg
>WENV170577133
FRDC01003531
430786
Alphaproteobacteria
TGT
Thr
>WENV170577150
FRDC01003633
179638
Alphaproteobacteria
CCG
Arg
>WENV170577251
FRDC01004238
202191
Alphaproteobacteria
CCG
Arg
>WENV170577364
FRDC01004907
354296
Alphaproteobacteria
TAC
Val
>WENV170577366
FRDC01004917
400216
Alphaproteobacteria
TTG
Gln
>WENV170577372
FRDC01004987
320067
Alphaproteobacteria
CGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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