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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180023973
FTIF01005321
400295
Actinomycetota
GAC
Val
>WENV180024047
FTIF01016951
177601
Actinomycetota
CAT
Met
>WENV180023922
FTIF01004099
342383
Actinomycetota
GGC
Ala
>WENV180023787
FTIF01000373
332531
Actinomycetota
GTT
Asn
>WENV180023974
FTIF01005323
177967
Actinomycetota
TGG
Pro
>WENV180024070
FTIF01024119
177967
Actinomycetota
TGG
Pro
>WENV180024159
FTIF01101986
345086
Actinomycetota
ACG
Arg
>WENV180024239
FTIF01349086
177965
Actinomycetota
GTC
Asp
>WENV180024238
FTIF01349086
283095
Actinomycetota
TTC
Glu
>WENV180023941
FTIF01004723
284585
Actinomycetota
CTT
Lys
>WENV180023771
FTIF01000156
480992
Actinomycetota
CCC
Gly
>WENV180023899
FTIF01003635
400457
Actinomycetota
CTG
Gln
>WENV180024074
FTIF01025356
400457
Actinomycetota
CTG
Gln
>WENV180024099
FTIF01037312
177969
Actinomycetota
CGG
Pro
>WENV180024014
FTIF01008920
490635
Actinomycetota
TCC
Gly
>WENV180024059
FTIF01018831
490635
Actinomycetota
TCC
Gly
>WENV180023917
FTIF01003880
301032
Actinomycetota
CAT
Met
>WENV180023990
FTIF01006152
281661
Actinomycetota
TAC
Val
>WENV180024055
FTIF01018511
280803
Actinomycetota
TGC
Ala
>WENV180023995
FTIF01006437
315977
Actinomycetota
CTT
Lys
>WENV180024114
FTIF01048386
315977
Actinomycetota
CTT
Lys
>WENV180024168
FTIF01111573
286927
Actinomycetota
TCT
Arg
>WENV180023796
FTIF01000430
56310
Actinomycetota
GGA
Ser
>WENV180024223
FTIF01323654
56310
Actinomycetota
GGA
Ser
>WENV180023871
FTIF01002608
307253
Actinomycetota
TCT
Arg
>WENV180023864
FTIF01002287
482493
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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