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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
72 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170672205
LAZR01000030
29729
Alphaproteobacteria
GCT
Ser
>WENV170672224
LAZR01000033
401148
Alphaproteobacteria
GGT
Thr
>WENV170672265
LAZR01000047
29841
Alphaproteobacteria
GGA
Ser
>WENV170672266
LAZR01000047
29727
Alphaproteobacteria
CGA
Ser
>WENV170672303
LAZR01000055
140876
Alphaproteobacteria
>WENV170672300
LAZR01000055
178725
Alphaproteobacteria
GTG
His
>WENV170672301
LAZR01000055
100185
Alphaproteobacteria
GAG
Leu
>WENV170672302
LAZR01000055
398996
Alphaproteobacteria
GCC
Gly
>WENV170672309
LAZR01000058
415537
Alphaproteobacteria
>WENV170672341
LAZR01000065
283596
Alphaproteobacteria
TTC
Glu
>WENV170672354
LAZR01000075
399000
Alphaproteobacteria
TTC
Glu
>WENV170672359
LAZR01000078
118316
Alphaproteobacteria
CAA
Leu
>WENV170672362
LAZR01000079
400514
Alphaproteobacteria
TTG
Gln
>WENV170672398
LAZR01000112
405688
Alphaproteobacteria
GTT
Asn
>WENV170672399
LAZR01000112
281676
Alphaproteobacteria
TAC
Val
>WENV170672397
LAZR01000112
481096
Alphaproteobacteria
CCC
Gly
>WENV170672406
LAZR01000123
282749
Alphaproteobacteria
CGC
Ala
>WENV170672409
LAZR01000130
178503
Alphaproteobacteria
GGG
Pro
>WENV170672411
LAZR01000135
190614
Alphaproteobacteria
TGG
Pro
>WENV170672419
LAZR01000137
400930
Alphaproteobacteria
GAA
Phe
>WENV170672455
LAZR01000182
191064
Alphaproteobacteria
CCG
Arg
>WENV170672458
LAZR01000189
140892
Alphaproteobacteria
TAG
Leu
>WENV170672495
LAZR01000229
400214
Alphaproteobacteria
>WENV170672500
LAZR01000232
100184
Alphaproteobacteria
CAG
Leu
>WENV170672498
LAZR01000232
283556
Alphaproteobacteria
TTT
Lys
>WENV170672522
LAZR01000238
140892
Alphaproteobacteria
TAG
Leu
>WENV170672542
LAZR01000280
481326
Alphaproteobacteria
GCA
Cys
>WENV170672543
LAZR01000281
400515
Alphaproteobacteria
GAC
Val
>WENV170672612
LAZR01000444
399000
Alphaproteobacteria
TTC
Glu
>WENV170672616
LAZR01000458
156125
Alphaproteobacteria
TCT
Arg
>WENV170672639
LAZR01000572
405688
Alphaproteobacteria
GTT
Asn
>WENV170672652
LAZR01000619
140893
Alphaproteobacteria
CAA
Leu
>WENV170672656
LAZR01000670
29729
Alphaproteobacteria
GCT
Ser
>WENV170672679
LAZR01000823
304182
Alphaproteobacteria
CTT
Lys
>WENV170672705
LAZR01001012
281650
Alphaproteobacteria
CCA
Trp
>WENV170672715
LAZR01001044
140876
Alphaproteobacteria
>WENV170672713
LAZR01001044
100185
Alphaproteobacteria
GAG
Leu
>WENV170672716
LAZR01001052
281650
Alphaproteobacteria
CCA
Trp
>WENV170672725
LAZR01001159
399000
Alphaproteobacteria
TTC
Glu
>WENV170672754
LAZR01001518
190614
Alphaproteobacteria
TGG
Pro
>WENV170672757
LAZR01001545
283556
Alphaproteobacteria
TTT
Lys
>WENV170672784
LAZR01001990
178784
Alphaproteobacteria
CAT
Met
>WENV170672793
LAZR01002192
481096
Alphaproteobacteria
CCC
Gly
>WENV170672855
LAZR01002684
178503
Alphaproteobacteria
GGG
Pro
>WENV170672869
LAZR01002828
281676
Alphaproteobacteria
TAC
Val
>WENV170672915
LAZR01003223
201940
Alphaproteobacteria
CAT
Met
>WENV170672925
LAZR01003244
400514
Alphaproteobacteria
TTG
Gln
>WENV170672977
LAZR01003930
180029
Alphaproteobacteria
CAT
Met
>WENV170672979
LAZR01003963
400930
Alphaproteobacteria
GAA
Phe
>WENV170673053
LAZR01005069
156125
Alphaproteobacteria
TCT
Arg
>WENV170673055
LAZR01005156
100184
Alphaproteobacteria
CAG
Leu
>WENV170673063
LAZR01005388
178725
Alphaproteobacteria
GTG
His
>WENV170673097
LAZR01006201
400515
Alphaproteobacteria
GAC
Val
>WENV170673120
LAZR01006771
29841
Alphaproteobacteria
GGA
Ser
>WENV170673182
LAZR01007868
400930
Alphaproteobacteria
GAA
Phe
>WENV170673406
LAZR01013506
141247
Alphaproteobacteria
CAA
Leu
>WENV170673685
LAZR01022942
29702
Alphaproteobacteria
GGA
Ser
>WENV170673720
LAZR01024905
400515
Alphaproteobacteria
GAC
Val
>WENV170673772
LAZR01027850
398994
Alphaproteobacteria
GTT
Asn
>WENV170673853
LAZR01032169
73490
Alphaproteobacteria
GAG
Leu
>WENV170673852
LAZR01032169
428327
Alphaproteobacteria
GCC
Gly
>WENV170673894
LAZR01033237
411290
Alphaproteobacteria
CAC
Val
>WENV170673902
LAZR01034073
398994
Alphaproteobacteria
GTT
Asn
>WENV170673906
LAZR01034377
140963
Alphaproteobacteria
>WENV170673924
LAZR01034935
29841
Alphaproteobacteria
GGA
Ser
>WENV170673931
LAZR01035278
290029
Alphaproteobacteria
TGT
Thr
>WENV170673964
LAZR01037423
178725
Alphaproteobacteria
GTG
His
>WENV170674121
LAZR01045511
178503
Alphaproteobacteria
GGG
Pro
>WENV170674287
LAZR01055663
398995
Alphaproteobacteria
CAC
Val
>WENV170674343
LAZR01058697
283601
Alphaproteobacteria
CGT
Thr
>WENV170674387
LAZR01062331
29727
Alphaproteobacteria
CGA
Ser
>WENV170674449
LAZR01066470
399480
Alphaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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