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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
194 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170874317
MDTC01002063
480629
Gammaproteobacteria
GCA
Cys
>WENV170874417
MDTC01004408
176796
Gammaproteobacteria
GGG
Pro
>WENV170874418
MDTC01004447
180680
Gammaproteobacteria
GAC
Val
>WENV170874419
MDTC01004447
285547
Gammaproteobacteria
TTG
Gln
>WENV170874678
MDTC01009137
197991
Gammaproteobacteria
ACG
Arg
>WENV170874800
MDTC01011342
280812
Gammaproteobacteria
GAA
Phe
>WENV170874801
MDTC01011342
284022
Gammaproteobacteria
TGT
Thr
>WENV170874802
MDTC01011342
280812
Gammaproteobacteria
GAA
Phe
>WENV170874994
MDTC01014470
329164
Gammaproteobacteria
TTT
Lys
>WENV170875144
MDTC01016771
208229
Gammaproteobacteria
TGG
Pro
>WENV170875256
MDTC01018486
284131
Gammaproteobacteria
GCC
Gly
>WENV170875266
MDTC01018743
20618
Gammaproteobacteria
GGA
Ser
>WENV170875297
MDTC01019202
118413
Gammaproteobacteria
TAG
Leu
>WENV170875302
MDTC01019245
22069
Gammaproteobacteria
TGA
Ser
>WENV170875415
MDTC01021201
299227
Gammaproteobacteria
GTT
Asn
>WENV170875543
MDTC01023567
176545
Gammaproteobacteria
CAT
Met
>WENV170875585
MDTC01024252
315775
Gammaproteobacteria
TGT
Thr
>WENV170875599
MDTC01024715
197498
Gammaproteobacteria
TGG
Pro
>WENV170875601
MDTC01024715
291402
Gammaproteobacteria
GTG
His
>WENV170875828
MDTC01029540
180681
Gammaproteobacteria
TGG
Pro
>WENV170875829
MDTC01029540
184424
Gammaproteobacteria
TCT
Arg
>WENV170875830
MDTC01029540
281908
Gammaproteobacteria
GTG
His
>WENV170875831
MDTC01029540
118640
Gammaproteobacteria
TAG
Leu
>WENV170875835
MDTC01029591
178471
Gammaproteobacteria
GTT
Asn
>WENV170875888
MDTC01030458
284706
Gammaproteobacteria
GTT
Asn
>WENV170875965
MDTC01032201
283964
Gammaproteobacteria
TTT
Lys
>WENV170875995
MDTC01032974
74766
Gammaproteobacteria
CAG
Leu
>WENV170876042
MDTC01033886
178169
Gammaproteobacteria
GAC
Val
>WENV170876134
MDTC01035220
181513
Gammaproteobacteria
TGG
Pro
>WENV170876312
MDTC01038001
480516
Gammaproteobacteria
GCA
Cys
>WENV170876436
MDTC01039786
297858
Gammaproteobacteria
TGC
Ala
>WENV170876536
MDTC01041763
480629
Gammaproteobacteria
GCA
Cys
>WENV170876695
MDTC01044933
297858
Gammaproteobacteria
TGC
Ala
>WENV170876862
MDTC01047857
287057
Gammaproteobacteria
GAA
Phe
>WENV170876912
MDTC01048756
284131
Gammaproteobacteria
GCC
Gly
>WENV170876913
MDTC01048756
284131
Gammaproteobacteria
GCC
Gly
>WENV170877002
MDTC01050234
74048
Gammaproteobacteria
CAA
Leu
>WENV170877086
MDTC01051778
181513
Gammaproteobacteria
TGG
Pro
>WENV170877087
MDTC01051778
299414
Gammaproteobacteria
TTT
Lys
>WENV170877088
MDTC01051778
299414
Gammaproteobacteria
TTT
Lys
>WENV170877284
MDTC01054806
176301
Gammaproteobacteria
GAT
Ile
>WENV170877355
MDTC01056379
285837
Gammaproteobacteria
TAC
Val
>WENV170877397
MDTC01057207
178533
Gammaproteobacteria
GGG
Pro
>WENV170877505
MDTC01059150
186591
Gammaproteobacteria
ACG
Arg
>WENV170877588
MDTC01060868
283964
Gammaproteobacteria
TTT
Lys
>WENV170877643
MDTC01061795
221668
Gammaproteobacteria
ACG
Arg
>WENV170877711
MDTC01063051
56340
Gammaproteobacteria
GGA
Ser
>WENV170877867
MDTC01065869
320445
Gammaproteobacteria
GTT
Asn
>WENV170877994
MDTC01068440
317782
Gammaproteobacteria
TAC
Val
>WENV170877996
MDTC01068440
317782
Gammaproteobacteria
TAC
Val
>WENV170878108
MDTC01070223
201377
Gammaproteobacteria
TGG
Pro
>WENV170878128
MDTC01070576
176544
Gammaproteobacteria
CAT
Met
>WENV170878129
MDTC01070576
118640
Gammaproteobacteria
TAG
Leu
>WENV170878130
MDTC01070576
285547
Gammaproteobacteria
TTG
Gln
>WENV170878131
MDTC01070576
118640
Gammaproteobacteria
TAG
Leu
>WENV170878247
MDTC01072684
158246
Gammaproteobacteria
GTC
Asp
>WENV170878583
MDTC01079397
180680
Gammaproteobacteria
GAC
Val
>WENV170878672
MDTC01081245
300318
Gammaproteobacteria
GGC
Ala
>WENV170878681
MDTC01081400
283282
Gammaproteobacteria
TTT
Lys
>WENV170878689
MDTC01081453
313852
Gammaproteobacteria
TTC
Glu
>WENV170878809
MDTC01083794
284115
Gammaproteobacteria
TAC
Val
>WENV170878936
MDTC01086392
218791
Gammaproteobacteria
ACG
Arg
>WENV170879232
MDTC01091433
282902
Gammaproteobacteria
TGT
Thr
>WENV170879233
MDTC01091433
140925
Gammaproteobacteria
GTA
Tyr
>WENV170879234
MDTC01091433
481325
Gammaproteobacteria
TCC
Gly
>WENV170879249
MDTC01091665
281275
Gammaproteobacteria
TGT
Thr
>WENV170879284
MDTC01092407
334421
Gammaproteobacteria
TGT
Thr
>WENV170879313
MDTC01092765
177028
Gammaproteobacteria
CAT
Met
>WENV170879461
MDTC01095653
180681
Gammaproteobacteria
TGG
Pro
>WENV170879464
MDTC01095741
411318
Gammaproteobacteria
TTG
Gln
>WENV170879465
MDTC01095741
118598
Gammaproteobacteria
TAG
Leu
>WENV170879558
MDTC01096990
186591
Gammaproteobacteria
ACG
Arg
>WENV170879623
MDTC01098241
179710
Gammaproteobacteria
GAC
Val
>WENV170879700
MDTC01099559
196907
Gammaproteobacteria
GAC
Val
>WENV170879703
MDTC01099667
402281
Gammaproteobacteria
GCC
Gly
>WENV170879772
MDTC01100881
178471
Gammaproteobacteria
GTT
Asn
>WENV170879958
MDTC01103632
329164
Gammaproteobacteria
TTT
Lys
>WENV170880050
MDTC01105455
280812
Gammaproteobacteria
GAA
Phe
>WENV170880126
MDTC01106877
297858
Gammaproteobacteria
TGC
Ala
>WENV170880188
MDTC01108381
120827
Gammaproteobacteria
GAG
Leu
>WENV170880276
MDTC01110077
74339
Gammaproteobacteria
GAG
Leu
>WENV170880395
MDTC01112516
208313
Gammaproteobacteria
GAC
Val
>WENV170880492
MDTC01114691
284706
Gammaproteobacteria
GTT
Asn
>WENV170880518
MDTC01115027
480653
Gammaproteobacteria
GCA
Cys
>WENV170880534
MDTC01115387
182374
Gammaproteobacteria
CAT
Met
>WENV170880716
MDTC01119010
208229
Gammaproteobacteria
TGG
Pro
>WENV170880782
MDTC01120121
480516
Gammaproteobacteria
GCA
Cys
>WENV170880805
MDTC01120535
180679
Gammaproteobacteria
CCA
Trp
>WENV170880875
MDTC01121866
141076
Gammaproteobacteria
GTA
Tyr
>WENV170880934
MDTC01122594
408063
Gammaproteobacteria
TCC
Gly
>WENV170881005
MDTC01124094
284706
Gammaproteobacteria
GTT
Asn
>WENV170881103
MDTC01125291
313852
Gammaproteobacteria
TTC
Glu
>WENV170881236
MDTC01127672
178540
Gammaproteobacteria
TGG
Pro
>WENV170881355
MDTC01129615
284022
Gammaproteobacteria
TGT
Thr
>WENV170881396
MDTC01130344
306288
Gammaproteobacteria
GCC
Gly
>WENV170881679
MDTC01135041
179710
Gammaproteobacteria
GAC
Val
>WENV170881789
MDTC01137265
283486
Gammaproteobacteria
TGT
Thr
>WENV170881811
MDTC01137748
179284
Gammaproteobacteria
CAT
Met
>WENV170881922
MDTC01139973
179710
Gammaproteobacteria
GAC
Val
>WENV170882290
MDTC01146663
317782
Gammaproteobacteria
TAC
Val
>WENV170882295
MDTC01146754
218791
Gammaproteobacteria
ACG
Arg
>WENV170882300
MDTC01146849
422716
Gammaproteobacteria
TTG
Gln
>WENV170882403
MDTC01148572
314350
Gammaproteobacteria
CCA
Trp
>WENV170882536
MDTC01150473
400402
Gammaproteobacteria
TTG
Gln
>WENV170882537
MDTC01150473
400402
Gammaproteobacteria
TTG
Gln
>WENV170882538
MDTC01150473
73502
Gammaproteobacteria
CAG
Leu
>WENV170882566
MDTC01150907
183804
Gammaproteobacteria
CAT
Met
>WENV170882641
MDTC01151609
281939
Gammaproteobacteria
TTT
Lys
>WENV170882667
MDTC01152134
196907
Gammaproteobacteria
GAC
Val
>WENV170882675
MDTC01152189
282902
Gammaproteobacteria
TGT
Thr
>WENV170882742
MDTC01153308
178175
Gammaproteobacteria
ACG
Arg
>WENV170882753
MDTC01153463
176478
Gammaproteobacteria
CAT
Met
>WENV170882764
MDTC01153576
178543
Gammaproteobacteria
GGG
Pro
>WENV170882834
MDTC01154822
311084
Gammaproteobacteria
GCC
Gly
>WENV170882835
MDTC01154822
480629
Gammaproteobacteria
GCA
Cys
>WENV170882968
MDTC01157293
20273
Gammaproteobacteria
TGA
Ser
>WENV170882980
MDTC01157435
180679
Gammaproteobacteria
CCA
Trp
>WENV170883124
MDTC01160235
282902
Gammaproteobacteria
TGT
Thr
>WENV170883145
MDTC01160702
313852
Gammaproteobacteria
TTC
Glu
>WENV170883192
MDTC01161471
158246
Gammaproteobacteria
GTC
Asp
>WENV170883205
MDTC01161812
123265
Gammaproteobacteria
GAG
Leu
>WENV170883334
MDTC01164410
186418
Gammaproteobacteria
GTC
Asp
>WENV170883376
MDTC01165330
180679
Gammaproteobacteria
CCA
Trp
>WENV170883521
MDTC01167377
179888
Gammaproteobacteria
ACG
Arg
>WENV170883555
MDTC01167981
178471
Gammaproteobacteria
GTT
Asn
>WENV170883558
MDTC01168124
218635
Gammaproteobacteria
GAC
Val
>WENV170883699
MDTC01170772
214256
Gammaproteobacteria
GGG
Pro
>WENV170883747
MDTC01171405
488965
Gammaproteobacteria
GCA
Cys
>WENV170883808
MDTC01172879
282902
Gammaproteobacteria
TGT
Thr
>WENV170883844
MDTC01173730
480941
Gammaproteobacteria
TCC
Gly
>WENV170883869
MDTC01174299
178549
Gammaproteobacteria
GTT
Asn
>WENV170883937
MDTC01175459
317782
Gammaproteobacteria
TAC
Val
>WENV170883997
MDTC01176367
488965
Gammaproteobacteria
GCA
Cys
>WENV170884003
MDTC01176446
314350
Gammaproteobacteria
CCA
Trp
>WENV170884168
MDTC01179110
334421
Gammaproteobacteria
TGT
Thr
>WENV170884250
MDTC01180635
198810
Gammaproteobacteria
GAT
Ile
>WENV170884492
MDTC01184254
480516
Gammaproteobacteria
GCA
Cys
>WENV170884503
MDTC01184379
313852
Gammaproteobacteria
TTC
Glu
>WENV170884519
MDTC01184753
186418
Gammaproteobacteria
GTC
Asp
>WENV170884686
MDTC01187711
176301
Gammaproteobacteria
GAT
Ile
>WENV170884780
MDTC01189497
73502
Gammaproteobacteria
CAG
Leu
>WENV170884961
MDTC01193478
284693
Gammaproteobacteria
TTC
Glu
>WENV170884985
MDTC01193902
211156
Gammaproteobacteria
CGG
Pro
>WENV170884998
MDTC01194140
283283
Gammaproteobacteria
TAC
Val
>WENV170884999
MDTC01194140
283283
Gammaproteobacteria
TAC
Val
>WENV170885161
MDTC01196835
282902
Gammaproteobacteria
TGT
Thr
>WENV170885359
MDTC01200647
182374
Gammaproteobacteria
CAT
Met
>WENV170885601
MDTC01205491
282894
Gammaproteobacteria
GAA
Phe
>WENV170885616
MDTC01205755
284022
Gammaproteobacteria
TGT
Thr
>WENV170885619
MDTC01205755
329948
Gammaproteobacteria
GGT
Thr
>WENV170885682
MDTC01206920
314350
Gammaproteobacteria
CCA
Trp
>WENV170885827
MDTC01209619
488965
Gammaproteobacteria
GCA
Cys
>WENV170885899
MDTC01210871
176665
Gammaproteobacteria
CGG
Pro
>WENV170885945
MDTC01211641
73123
Gammaproteobacteria
CAA
Leu
>WENV170885990
MDTC01212560
177028
Gammaproteobacteria
CAT
Met
>WENV170886189
MDTC01216390
314350
Gammaproteobacteria
CCA
Trp
>WENV170886283
MDTC01218396
291402
Gammaproteobacteria
GTG
His
>WENV170886360
MDTC01220152
481314
Gammaproteobacteria
GCA
Cys
>WENV170886948
MDTC01231047
178543
Gammaproteobacteria
GGG
Pro
>WENV170886959
MDTC01231190
311084
Gammaproteobacteria
GCC
Gly
>WENV170886960
MDTC01231190
284022
Gammaproteobacteria
TGT
Thr
>WENV170887063
MDTC01233168
189904
Gammaproteobacteria
CCA
Trp
>WENV170887227
MDTC01235982
281282
Gammaproteobacteria
TTC
Glu
>WENV170887285
MDTC01237447
283282
Gammaproteobacteria
TTT
Lys
>WENV170887286
MDTC01237447
283282
Gammaproteobacteria
TTT
Lys
>WENV170887352
MDTC01238542
176301
Gammaproteobacteria
GAT
Ile
>WENV170887540
MDTC01241429
23169
Gammaproteobacteria
GGA
Ser
>WENV170887952
MDTC01248809
282902
Gammaproteobacteria
TGT
Thr
>WENV170888053
MDTC01250084
73504
Gammaproteobacteria
TAA
Leu
>WENV170888334
MDTC01255963
280812
Gammaproteobacteria
GAA
Phe
>WENV170888418
MDTC01257204
480653
Gammaproteobacteria
GCA
Cys
>WENV170888700
MDTC01262252
299414
Gammaproteobacteria
TTT
Lys
>WENV170888720
MDTC01262733
488965
Gammaproteobacteria
GCA
Cys
>WENV170888737
MDTC01262944
178025
Gammaproteobacteria
GAC
Val
>WENV170888766
MDTC01263738
201377
Gammaproteobacteria
TGG
Pro
>WENV170888781
MDTC01264116
176663
Gammaproteobacteria
GGG
Pro
>WENV170888795
MDTC01264266
480653
Gammaproteobacteria
GCA
Cys
>WENV170888841
MDTC01264947
306288
Gammaproteobacteria
GCC
Gly
>WENV170888852
MDTC01265217
289747
Gammaproteobacteria
GTG
His
>WENV170888885
MDTC01265755
283964
Gammaproteobacteria
TTT
Lys
>WENV170888932
MDTC01266440
283966
Gammaproteobacteria
CCT
Arg
>WENV170888952
MDTC01266919
186591
Gammaproteobacteria
ACG
Arg
>WENV170888953
MDTC01266919
186591
Gammaproteobacteria
ACG
Arg
>WENV170889094
MDTC01269421
20968
Gammaproteobacteria
TGA
Ser
>WENV170889194
MDTC01271089
118218
Gammaproteobacteria
TAG
Leu
>WENV170889228
MDTC01271638
284706
Gammaproteobacteria
GTT
Asn
>WENV170889235
MDTC01271803
178544
Gammaproteobacteria
CAT
Met
>WENV170889297
MDTC01272705
481206
Gammaproteobacteria
GCA
Cys
>WENV170889404
MDTC01274345
306288
Gammaproteobacteria
GCC
Gly
>WENV170889414
MDTC01274432
280812
Gammaproteobacteria
GAA
Phe
>WENV170889415
MDTC01274432
284022
Gammaproteobacteria
TGT
Thr
>WENV170889492
MDTC01275333
281283
Gammaproteobacteria
GTG
His
>WENV170889528
MDTC01276141
20664
Gammaproteobacteria
GCT
Ser
>WENV170889529
MDTC01276141
221668
Gammaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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