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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183703706
PDVJ01037001
282862
Betaproteobacteria
TGC
Ala
>WENV183703705
PDVJ01037001
189915
Betaproteobacteria
GAT
Ile
>WENV183703745
PDVJ01040509
192191
Betaproteobacteria
CAT
Met
>WENV183703689
PDVJ01035491
111196
Betaproteobacteria
GTA
Tyr
>WENV183703500
PDVJ01018522
120253
Betaproteobacteria
CAG
Leu
>WENV183703869
PDVJ01058071
120253
Betaproteobacteria
CAG
Leu
>WENV183703485
PDVJ01017600
328657
Betaproteobacteria
TAC
Val
>WENV183703924
PDVJ01069823
211214
Betaproteobacteria
CAT
Met
>WENV183703419
PDVJ01013299
504022
Betaproteobacteria
TCC
Gly
>WENV183703387
PDVJ01011818
504022
Betaproteobacteria
TCC
Gly
>WENV183703388
PDVJ01011818
409406
Betaproteobacteria
GGT
Thr
>WENV183703185
PDVJ01004662
20603
Betaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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