tRNA genes clustered and arranged according to each identical group

Synergistota

Anticodon = CCG

HIT: 24 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.279719 (12 seq.)
>WENV181230181 OFEK01000393 [OFEK] activated sludge metagenome; Anaerobic digester 43368 43292 - Arg CCG [ENA] ¢þ
>WENV170678358 LDZT01014039 [LDZT] terrestrial metagenome; oil reservoir sample SB1 451 375 - Arg CCG [ENA] ¢þ
>WENV170678628 LDZU01003432 [LDZU] terrestrial metagenome; oil reservoir sample SB2 622 698 + Arg CCG [ENA] ¢þ
>WENV170726846 LSQX01396093 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 23953 23877 - Arg CCG [ENA] ¢þ
>WENV170967529 MTKW01001898 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 124 200 + Arg CCG [ENA] ¢þ
>WENV170971671 MTKX01009418 [MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 70253 70329 + Arg CCG [ENA] ¢þ
>WENV170974306 MTKY01057332 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 11596 11672 + Arg CCG [ENA] ¢þ
>WENV170976855 MTKZ01013284 [MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 59368 59292 - Arg CCG [ENA] ¢þ
>W1610613710 LGGE01000032 Synergistota Synergistales bacterium 57_84 [LGGE] 451 375 - Arg CCG [ENA] ¡û
>W1610614166 LGGV01000057 Synergistota Synergistales bacterium 58_81 [LGGV] 622 698 + Arg CCG [ENA] ¡û
>W1710734863 LGGE01000032 Synergistota Synergistales bacterium 57_84 [LGGE] 451 375 - Arg CCG [ENA] ¡û
>W1710735249 LGGV01000057 Synergistota Synergistales bacterium 58_81 [LGGV] 622 698 + Arg CCG [ENA] ¡û
Identical group No.290912 (6 seq.)
>C171050556 CP016757 Synergistota Cloacibacillus porcorum CL-84 [CP016757] 2218218 2218142 - Arg CCG - ¡û
>WENV181642173 OGNF01101296 [OGNF] metagenome; Human gut stool 363 439 + Arg CCG [ENA] ¢þ
>WENV181914814 OGYF01001290 [OGYF] human gut metagenome; faeces 21717 21793 + Arg CCG [ENA] ¢þ
>WENV182031450 OHCS01023421 [OHCS] human gut metagenome; feces 647 723 + Arg CCG [ENA] ¢þ
>WENV182180473 OHNO01001248 [OHNO] human gut metagenome; feces 6625 6549 - Arg CCG [ENA] ¢þ
>WENV182212952 OHQG01020986 [OHQG] human gut metagenome; feces 499 423 - Arg CCG [ENA] ¢þ
Identical group No.292146 (21 seq.)
>W1711137586 LVBP01000127 Synergistota Synergistales bacterium Syner_02 [LVBP] 6286 6210 - Arg CCG [ENA] ¡û
>WENV180828839 ODKA01027690 [ODKA] human metagenome; G_DNA_Stool 1296 1220 - Arg CCG [ENA] ¢þ
>WENV181525122 OGHJ01000018 [OGHJ] metagenome; Human gut stool 214363 214287 - Arg CCG [ENA] ¢þ
>WENV181995511 OHAT01003711 [OHAT] human gut metagenome; faeces 1870 1794 - Arg CCG [ENA] ¢þ
>WENV182537696 OIXH01014694 [OIXH] human gut metagenome; faeces 2099 2023 - Arg CCG [ENA] ¢þ
>WENV182678889 OJNS01064238 [OJNS] human gut metagenome; human gut 333 409 + Arg CCG [ENA] ¢þ
>WENV182731240 OJPZ01042890 [OJPZ] human gut metagenome; stool sample 90 166 + Arg CCG [ENA] ¢þ
>WENV182740404 OJQL01012005 [OJQL] human gut metagenome; stool sample 137 213 + Arg CCG [ENA] ¢þ
>WENV182882193 OKSB01000106 [OKSB] human gut metagenome; faeces 43434 43510 + Arg CCG [ENA] ¢þ
>WENV182891859 OKSH01005942 [OKSH] human gut metagenome; faeces 1861 1785 - Arg CCG [ENA] ¢þ
>WENV183223252 OLQM01010709 [OLQM] human gut metagenome; faeces 1272 1196 - Arg CCG [ENA] ¢þ
>WENV183493177 OMGI01010454 [OMGI] human gut metagenome; human gut 113 189 + Arg CCG [ENA] ¢þ
>WENV183501794 OMGS01007827 [OMGS] human gut metagenome; human gut 191 267 + Arg CCG [ENA] ¢þ
>WENV183775312 PPYF01065323 [PPYF] human gut metagenome; stool from patient with Crohn's disease 24712 24636 - Arg CCG [ENA] ¢þ
>WENV183789008 PPYF01372755 [PPYF] human gut metagenome; stool from patient with Crohn's disease 1103 1179 + Arg CCG [ENA] ¢þ
>WENV170028987 CDYF01026562 [CDYF] gut metagenome; human stools 911 987 + Arg CCG [ENA] ¢þ
>W10111684 ADDR01000046 Thermodesulfobacteriota Desulfovibrio sp. 3_1_syn3 [ADDR] 423 499 + Arg CCG [ENA] ¡û
>W11107014 ACWM01000062 Thermodesulfobacteriota Desulfovibrio sp. 6_1_46AFAA [ACWM] 25213 25289 + Arg CCG [ENA] ¡û
>W11114611 ADDR01000046 Thermodesulfobacteriota Desulfovibrio sp. 3_1_syn3 [ADDR] 423 499 + Arg CCG [ENA] ¡û
>C161068987 CP014229 Thermodesulfobacteriota Desulfovibrio fairfieldensis CCUG 45958 [CP014229] 3439235 3439159 - Arg CCG [Ensembl] ¡û
>W1610948706 LVBP01000127 Synergistota Synergistales bacterium Syner_02 [LVBP] 6286 6210 - Arg CCG [ENA] ¡û
Identical group No.304072 (1 seq.)
>W1712039391 NFJQ01000012 Synergistota Cloacibacillus sp. An23 [NFJQ] 123289 123213 - Arg CCG [ENA] ¡û
Identical group No.307534 (6 seq.)
>W141701204 JMKI01000036 Synergistota Synergistes jonesii [JMKI] 10264 10340 + Arg CCG [ENA] ¡û
>W1710629245 JPZQ01000040 Synergistota Synergistes jonesii [JPZQ] 9366 9442 + Arg CCG [ENA] ¡û
>W1710629289 JPZR01000030 Synergistota Synergistes jonesii [JPZR] 9367 9443 + Arg CCG [ENA] ¡û
>W1710629331 JPZS01000033 Synergistota Synergistes jonesii [JPZS] 9366 9442 + Arg CCG [ENA] ¡û
>W1710631841 JQEK01000045 Synergistota Synergistes jonesii [JQEK] 9366 9442 + Arg CCG [ENA] ¡û
>W1710631879 JQEL01000036 Synergistota Synergistes jonesii [JQEL] 9366 9442 + Arg CCG [ENA] ¡û
Identical group No.318680 (4 seq.)
>WENV170677168 LDZT01003296 [LDZT] terrestrial metagenome; oil reservoir sample SB1 8180 8256 + Arg CCG [ENA] ¢þ
>WENV170679140 LDZU01008731 [LDZU] terrestrial metagenome; oil reservoir sample SB2 246 322 + Arg CCG [ENA] ¢þ
>W1610613629 LGGB01000048 Synergistota Synergistales bacterium 53_16 [LGGB] 8180 8256 + Arg CCG [ENA] ¡û
>W1710734801 LGGB01000048 Synergistota Synergistales bacterium 53_16 [LGGB] 8180 8256 + Arg CCG [ENA] ¡û
Identical group No.330351 (7 seq.)
>WENV181908888 OGYB01001680 [OGYB] human gut metagenome; faeces 2347 2423 + Arg CCG [ENA] ¢þ
>WENV182143507 OHKV01002456 [OHKV] human gut metagenome; feces 270 194 - Arg CCG [ENA] ¢þ
>WENV182172556 OHMY01016019 [OHMY] human gut metagenome; feces 731 655 - Arg CCG [ENA] ¢þ
>WENV182538091 OIXH01038788 [OIXH] human gut metagenome; faeces 1237 1313 + Arg CCG [ENA] ¢þ
>WENV183039137 OLGB01003465 [OLGB] human gut metagenome; faeces 2114 2190 + Arg CCG [ENA] ¢þ
>W141452037 JFBR01000002 Synergistota Cloacibacillus evryensis DSM 19522 [JFBR] 885770 885694 - Arg CCG [ENA] ¡û
>W121000507 ACUH01000059 Synergistota Synergistes sp. 3_1_syn1 [ACUH] 30871 30795 - Arg CCG [ENA] ¡û
Identical group No.352335 (4 seq.)
>WENV181973388 OHAA01037420 [OHAA] human gut metagenome; faeces 481 557 + Arg CCG [ENA] ¢þ
>WENV181989006 OHAO01002156 [OHAO] human gut metagenome; faeces 5944 6020 + Arg CCG [ENA] ¢þ
>W10113041 ADFP01000102 Synergistota Pyramidobacter piscolens W5455 [ADFP] 7146 7222 + Arg CCG [ENA] ¡û
>W11116268 ADFP01000102 Synergistota Pyramidobacter piscolens W5455 [ADFP] 7146 7222 + Arg CCG [ENA] ¡û
Identical group No.352494 (5 seq.)
>WENV181409163 OGCI01000019 [OGCI] hot springs metagenome; Hot spring water 63909 63833 - Arg CCG [ENA] ¢þ
>W09110159 ABUW01000011 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [ABUW] 6405 6481 + Arg CCG [ENA] ¡û
>C10112971 CP001818 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [CP001818] 767904 767980 + Arg CCG [Ensembl] ¡û
>W11138593 AEIV01000001 Synergistota Aminomonas paucivorans DSM 12260 [AEIV] 1238738 1238814 + Arg CCG [ENA] ¡û
>W121031642 AHGV01000001 Synergistota Thermanaerovibrio velox DSM 12556 [AHGV] 1096447 1096371 - Arg CCG [ENA] ¡û
Identical group No.363957 (3 seq.)
>W141146842 AWWC01000009 Synergistota Jonquetella sp. BV3C21 [AWWC] 20043 20119 + Arg CCG [ENA] ¡û
>W09132977 ACOO02000025 Synergistota Jonquetella anthropi E3_33 E1 [ACOO] 74925 74849 - Arg CCG [ENA] ¡û
>W121017503 AGRU01000003 Synergistota Jonquetella anthropi DSM 22815 [AGRU] 371454 371378 - Arg CCG [ENA] ¡û
Identical group No.370261 (5 seq.)
>W1711137633 LVBQ01000098 Synergistota Synergistales bacterium Syner_03 [LVBQ] 948 1024 + Arg CCG [ENA] ¡û
>WENV181311816 OFJB01013992 [OFJB] sludge metagenome; sludge 320 396 + Arg CCG [ENA] ¢þ
>WENV170685912 LFRM01115407 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 1467 1543 + Arg CCG [ENA] ¢þ
>WENV170722890 LSQX01247460 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 1276 1352 + Arg CCG [ENA] ¢þ
>W1610948753 LVBQ01000098 Synergistota Synergistales bacterium Syner_03 [LVBQ] 948 1024 + Arg CCG [ENA] ¡û
Identical group No.374077 (1 seq.)
>W131157323 AQRZ01000038 Synergistota Synergistetes bacterium JGI 0000079-D21 [AQRZ] 11139 11063 - Arg CCG [ENA] ¡û
Identical group No.406134 (2 seq.)
>WENV170656558 JTFO01024855 [JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater 427 503 + Arg CCG [ENA] ¢þ
>W1710608712 FXBB01000028 Synergistota Dethiosulfovibrio salsuginis [FXBB] 10909 10985 + Arg CCG [ENA] ¡û
Identical group No.424044 (2 seq.)
>WENV183717191 PDWJ01000558 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 24127 24203 + Arg CCG [ENA] ¢þ
>W09108929 ABTR01000012 Synergistota Dethiosulfovibrio peptidovorans DSM 11002 [ABTR] 18614 18690 + Arg CCG [ENA] ¡û
Identical group No.430986 (1 seq.)
>W141278976 JAFY01000007 Synergistota Aminiphilus circumscriptus DSM 16581 [JAFY] 949219 949143 - Arg CCG [ENA] ¡û
Identical group No.440562 (1 seq.)
>W1711744515 MUHX01000035 Synergistota Pyramidobacter sp. C12-8 [MUHX] 21489 21413 - Arg CCG [ENA] ¡û
Identical group No.440914 (1 seq.)
>C121005680 CP003096 Synergistota Thermovirga lienii DSM 17291 [CP003096] 773285 773361 + Arg CCG [Ensembl] ¡û
Identical group No.461540 (10 seq.)
>WENV170008173 AMZC01003575 [AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor 593 518 - Arg CCG [ENA] ¢þ
>WENV170563413 CZCB01017441 [CZCB] anaerobic digester metagenome; anaerobic digester 123 48 - Arg CCG [ENA] ¢þ
>WENV170684135 LFRM01022137 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 1079 1154 + Arg CCG [ENA] ¢þ
>WENV170687337 LFRM01189334 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 588 663 + Arg CCG [ENA] ¢þ
>WENV170688285 LFRM01237807 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 588 663 + Arg CCG [ENA] ¢þ
>WENV170718279 LSQX01068852 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 937 1012 + Arg CCG [ENA] ¢þ
>WENV170721818 LSQX01204431 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 893 968 + Arg CCG [ENA] ¢þ
>WENV170968966 MTKW01017961 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 21943 21868 - Arg CCG [ENA] ¢þ
>C121008085 CP003198 Synergistota Acetomicrobium mobile DSM 13181 [CP003198] 870199 870124 - Arg CCG [Ensembl] ¡û
>W1710594059 FSQZ01000001 Synergistota Acetomicrobium flavidum [FSQZ] 218896 218971 + Arg CCG [ENA] ¡û
Identical group No.490522 (3 seq.)
>W1711629577 MPPC01000027 Synergistota Aminobacterium sp. EBM-42 [MPPC] 63354 63279 - Arg CCG [ENA] ¡û
>WENV170723857 LSQX01283663 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 19926 19851 - Arg CCG [ENA] ¢þ
>C10100306 CP001997 Synergistota Aminobacterium colombiense DSM 12261 [CP001997] 731649 731724 + Arg CCG [Ensembl] ¡û
Identical group No.503172 (3 seq.)
>WENV170563526 CZCB01020574 [CZCB] anaerobic digester metagenome; anaerobic digester 1506 1581 + Arg CCG [ENA] ¢þ
>W09126609 ACJX01000142 Synergistota Acetomicrobium hydrogeniformans ATCC BAA-1850 [ACJX] 11298 11223 - Arg CCG [ENA] ¡û
>W1710530837 FNPD01000009 Synergistota Acetomicrobium thermoterrenum DSM 13490 [FNPD] 90554 90479 - Arg CCG [ENA] ¡û
Identical group No.504042 (3 seq.)
>WENV170676939 LDZS01003280 [LDZS] terrestrial metagenome; oil reservoir sample K3 350 275 - Arg CCG [ENA] ¢þ
>W1610613307 LGFQ01000100 Synergistota Synergistales bacterium 54_24 [LGFQ] 350 275 - Arg CCG [ENA] ¡û
>W1710734514 LGFQ01000100 Synergistota Synergistales bacterium 54_24 [LGFQ] 350 275 - Arg CCG [ENA] ¡û
Identical group No.512728 (9 seq.)
>W1711137568 LVBO01000368 Synergistota Synergistales bacterium Syner_01 [LVBO] 3974 3899 - Arg CCG [ENA] ¡û
>W1711137592 LVBP01000208 Synergistota Synergistales bacterium Syner_02 [LVBP] 607 682 + Arg CCG [ENA] ¡û
>WENV180346817 OBLN01320995 [OBLN] sediment metagenome; sediment 218 143 - Arg CCG [ENA] ¢þ
>WENV170689921 LFRM01317930 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 1159 1084 - Arg CCG [ENA] ¢þ
>WENV170717570 LSQX01040856 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 3013 2938 - Arg CCG [ENA] ¢þ
>WENV170723222 LSQX01259513 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 216 141 - Arg CCG [ENA] ¢þ
>WENV170725209 LSQX01334581 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 20989 21064 + Arg CCG [ENA] ¢þ
>W1610948688 LVBO01000368 Synergistota Synergistales bacterium Syner_01 [LVBO] 3974 3899 - Arg CCG [ENA] ¡û
>W1610948712 LVBP01000208 Synergistota Synergistales bacterium Syner_02 [LVBP] 607 682 + Arg CCG [ENA] ¡û
Identical group No.530756 (2 seq.)
>WENV180797749 ODJB01112210 [ODJB] human metagenome; G_DNA_Supragingival plaque 336 261 - Arg CCG [ENA] ¢þ
>C161104033 FP929056 Synergistota Fretibacterium fastidiosum SGP1 [FP929056] 2351387 2351312 - Arg CCG - ¡û
Identical group No.642161 (1 seq.)
>W141279020 JAFZ01000002 Synergistota Aminobacterium mobile DSM 12262 [JAFZ] 63237 63162 - Arg CCG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK