tRNA genes clustered and arranged according to each identical group

Synergistota

Anticodon = GGA

HIT: 20 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.8789 (3 seq.)
>WENV170008047 AMZC01000589 [AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor 2871 2964 + Ser GGA [ENA] ¢þ
>C121008076 CP003198 Synergistota Acetomicrobium mobile DSM 13181 [CP003198] 1414542 1414449 - Ser GGA [Ensembl] ¡û
>W1710594070 FSQZ01000001 Synergistota Acetomicrobium flavidum [FSQZ] 1745148 1745241 + Ser GGA [ENA] ¡û
Identical group No.9867 (1 seq.)
>W11138595 AEIV01000001 Synergistota Aminomonas paucivorans DSM 12260 [AEIV] 1244736 1244829 + Ser GGA [ENA] ¡û
Identical group No.11419 (4 seq.)
>WENV181409165 OGCI01000019 [OGCI] hot springs metagenome; Hot spring water 59847 59754 - Ser GGA [ENA] ¢þ
>W09110161 ABUW01000011 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [ABUW] 10469 10562 + Ser GGA [ENA] ¡û
>C10112973 CP001818 Synergistota Thermanaerovibrio acidaminovorans DSM 6589 [CP001818] 771968 772061 + Ser GGA [Ensembl] ¡û
>W121031644 AHGV01000001 Synergistota Thermanaerovibrio velox DSM 12556 [AHGV] 1092029 1091936 - Ser GGA [ENA] ¡û
Identical group No.11700 (1 seq.)
>W141278975 JAFY01000007 Synergistota Aminiphilus circumscriptus DSM 16581 [JAFY] 977176 977083 - Ser GGA [ENA] ¡û
Identical group No.12651 (4 seq.)
>WENV170676930 LDZS01003215 [LDZS] terrestrial metagenome; oil reservoir sample K3 11708 11800 + Ser GGA [ENA] ¢þ
>WENV170970466 MTKW01071699 [MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 1441 1349 - Ser GGA [ENA] ¢þ
>W1610613298 LGFQ01000035 Synergistota Synergistales bacterium 54_24 [LGFQ] 11708 11800 + Ser GGA [ENA] ¡û
>W1710734505 LGFQ01000035 Synergistota Synergistales bacterium 54_24 [LGFQ] 11708 11800 + Ser GGA [ENA] ¡û
Identical group No.16240 (5 seq.)
>W1711137634 LVBQ01000098 Synergistota Synergistales bacterium Syner_03 [LVBQ] 363 271 - Ser GGA [ENA] ¡û
>WENV181311884 OFJB01019174 [OFJB] sludge metagenome; sludge 188 280 + Ser GGA [ENA] ¢þ
>WENV170685913 LFRM01115407 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 880 788 - Ser GGA [ENA] ¢þ
>WENV170722891 LSQX01247460 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 689 597 - Ser GGA [ENA] ¢þ
>W1610948754 LVBQ01000098 Synergistota Synergistales bacterium Syner_03 [LVBQ] 363 271 - Ser GGA [ENA] ¡û
Identical group No.16803 (2 seq.)
>W09126639 ACJX01000213 Synergistota Acetomicrobium hydrogeniformans ATCC BAA-1850 [ACJX] 98084 97992 - Ser GGA [ENA] ¡û
>W1710530824 FNPD01000002 Synergistota Acetomicrobium thermoterrenum DSM 13490 [FNPD] 101144 101052 - Ser GGA [ENA] ¡û
Identical group No.20899 (14 seq.)
>C171050550 CP016757 Synergistota Cloacibacillus porcorum CL-84 [CP016757] 2220560 2220651 + Ser GGA - ¡û
>WENV181908556 OGYB01000102 [OGYB] human gut metagenome; faeces 181 272 + Ser GGA [ENA] ¢þ
>WENV181914815 OGYF01001290 [OGYF] human gut metagenome; faeces 19372 19281 - Ser GGA [ENA] ¢þ
>WENV182006037 OHBE01052280 [OHBE] human gut metagenome; faeces 492 583 + Ser GGA [ENA] ¢þ
>WENV182031178 OHCS01004556 [OHCS] human gut metagenome; feces 2241 2150 - Ser GGA [ENA] ¢þ
>WENV182143768 OHKV01022117 [OHKV] human gut metagenome; feces 117 26 - Ser GGA [ENA] ¢þ
>WENV182172591 OHMY01020663 [OHMY] human gut metagenome; feces 665 574 - Ser GGA [ENA] ¢þ
>WENV182180472 OHNO01001248 [OHNO] human gut metagenome; feces 8970 9061 + Ser GGA [ENA] ¢þ
>WENV182212688 OHQG01003723 [OHQG] human gut metagenome; feces 1614 1705 + Ser GGA [ENA] ¢þ
>WENV182216014 OHQM01011770 [OHQM] human gut metagenome; feces 808 899 + Ser GGA [ENA] ¢þ
>WENV182220923 OHQS01018667 [OHQS] human gut metagenome; feces 652 743 + Ser GGA [ENA] ¢þ
>WENV183038978 OLGB01002262 [OLGB] human gut metagenome; faeces 20719 20628 - Ser GGA [ENA] ¢þ
>W141452032 JFBR01000002 Synergistota Cloacibacillus evryensis DSM 19522 [JFBR] 888151 888242 + Ser GGA [ENA] ¡û
>W121000504 ACUH01000059 Synergistota Synergistes sp. 3_1_syn1 [ACUH] 33253 33344 + Ser GGA [ENA] ¡û
Identical group No.21606 (8 seq.)
>W1712039390 NFJQ01000012 Synergistota Cloacibacillus sp. An23 [NFJQ] 123933 124024 + Ser GGA [ENA] ¡û
>WENV182686903 OJNZ01069138 [OJNZ] human gut metagenome; human gut 130 221 + Ser GGA [ENA] ¢þ
>W141701209 JMKI01000037 Synergistota Synergistes jonesii [JMKI] 85335 85426 + Ser GGA [ENA] ¡û
>W1710629251 JPZQ01000047 Synergistota Synergistes jonesii [JPZQ] 30752 30843 + Ser GGA [ENA] ¡û
>W1710629295 JPZR01000037 Synergistota Synergistes jonesii [JPZR] 18113 18204 + Ser GGA [ENA] ¡û
>W1710629337 JPZS01000040 Synergistota Synergistes jonesii [JPZS] 30753 30844 + Ser GGA [ENA] ¡û
>W1710631818 JQEK01000006 Synergistota Synergistes jonesii [JQEK] 13117 13208 + Ser GGA [ENA] ¡û
>W1710631885 JQEL01000042 Synergistota Synergistes jonesii [JQEL] 30751 30842 + Ser GGA [ENA] ¡û
Identical group No.79612 (3 seq.)
>W141146859 AWWC01000018 Synergistota Jonquetella sp. BV3C21 [AWWC] 84751 84663 - Ser GGA [ENA] ¡û
>W09132961 ACOO02000017 Synergistota Jonquetella anthropi E3_33 E1 [ACOO] 84985 84897 - Ser GGA [ENA] ¡û
>W121017507 AGRU01000003 Synergistota Jonquetella anthropi DSM 22815 [AGRU] 89725 89637 - Ser GGA [ENA] ¡û
Identical group No.91369 (4 seq.)
>W1711629547 MPPC01000010 Synergistota Aminobacterium sp. EBM-42 [MPPC] 25562 25649 + Ser GGA [ENA] ¡û
>WENV170656034 JTFN01119172 [JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating 304 217 - Ser GGA [ENA] ¢þ
>WENV170719191 LSQX01104951 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 79672 79759 + Ser GGA [ENA] ¢þ
>C10100325 CP001997 Synergistota Aminobacterium colombiense DSM 12261 [CP001997] 1243808 1243721 - Ser GGA [Ensembl] ¡û
Identical group No.91550 (15 seq.)
>WENV180007764 FLSA01272712 [FLSA] metagenome; saliva 14 101 + Ser GGA [ENA] ¢þ
>WENV180728857 ODGU01109234 [ODGU] human metagenome; G_DNA_Supragingival plaque 32 119 + Ser GGA [ENA] ¢þ
>WENV180731826 ODGW01018463 [ODGW] human metagenome; G_DNA_Supragingival plaque 215 302 + Ser GGA [ENA] ¢þ
>WENV180735218 ODGZ01100439 [ODGZ] human metagenome; G_DNA_Supragingival plaque 253 166 - Ser GGA [ENA] ¢þ
>WENV180751496 ODHS01059350 [ODHS] human metagenome; G_DNA_Supragingival plaque 325 412 + Ser GGA [ENA] ¢þ
>WENV180797918 ODJB01163948 [ODJB] human metagenome; G_DNA_Supragingival plaque 23 110 + Ser GGA [ENA] ¢þ
>WENV180944896 ODUC01045089 [ODUC] human metagenome; G_DNA_Supragingival plaque 792 705 - Ser GGA [ENA] ¢þ
>WENV180981908 ODVE01085494 [ODVE] human metagenome; G_DNA_Supragingival plaque 326 239 - Ser GGA [ENA] ¢þ
>WENV181050391 ODYD01016075 [ODYD] human metagenome; G_DNA_Supragingival plaque 1734 1647 - Ser GGA [ENA] ¢þ
>WENV181077177 OEAP01030520 [OEAP] human metagenome; G_DNA_Supragingival plaque 209 296 + Ser GGA [ENA] ¢þ
>WENV181080843 OEAS01089344 [OEAS] human metagenome; G_DNA_Supragingival plaque 573 486 - Ser GGA [ENA] ¢þ
>WENV181091807 OEBC01093759 [OEBC] human metagenome; G_DNA_Supragingival plaque 482 569 + Ser GGA [ENA] ¢þ
>WENV181182742 OEJV01037750 [OEJV] human metagenome; G_DNA_Supragingival plaque 479 392 - Ser GGA [ENA] ¢þ
>WENV183509824 OMHJ01018228 [OMHJ] human oral metagenome; human oral 353 440 + Ser GGA [ENA] ¢þ
>C161104028 FP929056 Synergistota Fretibacterium fastidiosum SGP1 [FP929056] 1440647 1440734 + Ser GGA - ¡û
Identical group No.92492 (7 seq.)
>WENV183515985 OMKS01114947 [OMKS] sediment metagenome; hot spring sediment 283 196 - Ser GGA [ENA] ¢þ
>WENV170677150 LDZT01003252 [LDZT] terrestrial metagenome; oil reservoir sample SB1 7322 7235 - Ser GGA [ENA] ¢þ
>WENV170679054 LDZU01006809 [LDZU] terrestrial metagenome; oil reservoir sample SB2 2805 2718 - Ser GGA [ENA] ¢þ
>W1610613611 LGGB01000004 Synergistota Synergistales bacterium 53_16 [LGGB] 7322 7235 - Ser GGA [ENA] ¡û
>W1610614501 LGHG01000060 Synergistota Synergistales bacterium 54_9 [LGHG] 2805 2718 - Ser GGA [ENA] ¡û
>W1710734783 LGGB01000004 Synergistota Synergistales bacterium 53_16 [LGGB] 7322 7235 - Ser GGA [ENA] ¡û
>W1710735482 LGHG01000060 Synergistota Synergistales bacterium 54_9 [LGHG] 2805 2718 - Ser GGA [ENA] ¡û
Identical group No.92965 (5 seq.)
>WENV181229939 OFEK01000130 [OFEK] activated sludge metagenome; Anaerobic digester 15285 15198 - Ser GGA [ENA] ¢þ
>WENV170678341 LDZT01014011 [LDZT] terrestrial metagenome; oil reservoir sample SB1 44425 44338 - Ser GGA [ENA] ¢þ
>WENV170678512 LDZU01001298 [LDZU] terrestrial metagenome; oil reservoir sample SB2 3164 3251 + Ser GGA [ENA] ¢þ
>W1610613693 LGGE01000004 Synergistota Synergistales bacterium 57_84 [LGGE] 44425 44338 - Ser GGA [ENA] ¡û
>W1710734846 LGGE01000004 Synergistota Synergistales bacterium 57_84 [LGGE] 44425 44338 - Ser GGA [ENA] ¡û
Identical group No.97673 (4 seq.)
>WENV181989160 OHAO01003787 [OHAO] human gut metagenome; faeces 3311 3398 + Ser GGA [ENA] ¢þ
>WENV183763946 PPYE01311292 [PPYE] human gut metagenome; stool from patient with ulcerative colitis 30599 30686 + Ser GGA [ENA] ¢þ
>W10113040 ADFP01000093 Synergistota Pyramidobacter piscolens W5455 [ADFP] 15860 15773 - Ser GGA [ENA] ¡û
>W11116267 ADFP01000093 Synergistota Pyramidobacter piscolens W5455 [ADFP] 15860 15773 - Ser GGA [ENA] ¡û
Identical group No.100080 (2 seq.)
>WENV183714149 PDWI01169990 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 135 48 - Ser GGA [ENA] ¢þ
>W09108927 ABTR01000008 Synergistota Dethiosulfovibrio peptidovorans DSM 11002 [ABTR] 36518 36605 + Ser GGA [ENA] ¡û
Identical group No.109006 (1 seq.)
>W1710608669 FXBB01000001 Synergistota Dethiosulfovibrio salsuginis [FXBB] 329528 329441 - Ser GGA [ENA] ¡û
Identical group No.110704 (1 seq.)
>W1711744489 MUHX01000009 Synergistota Pyramidobacter sp. C12-8 [MUHX] 55764 55851 + Ser GGA [ENA] ¡û
Identical group No.110762 (1 seq.)
>C121005701 CP003096 Synergistota Thermovirga lienii DSM 17291 [CP003096] 1243662 1243575 - Ser GGA [Ensembl] ¡û
Identical group No.110876 (1 seq.)
>W141278994 JAFZ01000001 Synergistota Aminobacterium mobile DSM 12262 [JAFZ] 962484 962571 + Ser GGA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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