tRNA genes clustered and arranged according to each identical group

The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)

Anticodon = GGA

HIT: 20 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.15226 (1 seq.)
>SRA1003110 SRR002326.204961 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 110 201 + Ser GGA [SRA]
Identical group No.17862 (1 seq.)
>SRA1004141 SRR002328.168169 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 137 228 + Ser GGA [SRA]
Identical group No.22050 (15 seq.)
>W1710861849 LMDY01000001 Betaproteobacteria Methylibium sp. Root1272 [LMDY] 488558 488648 + Ser GGA [ENA] ¡û
>C013944 CP000555 Betaproteobacteria Methylibium petroleiphilum PM1 [CP000555] 2076048 2075958 - Ser GGA [Ensembl] ¡û
>WENV181227193 OFDN01003130 [OFDN] hot springs metagenome; Water 6459 6370 - Ser GGA [ENA] ¢þ
>W141207215 AZND01000096 Betaproteobacteria Methylibium sp. T29 [AZND] 3764 3674 - Ser GGA [ENA] ¡û
>W141214265 AZSN01000137 Betaproteobacteria Methylibium sp. T29-B [AZSN] 9450 9540 + Ser GGA [ENA] ¡û
>WENV170551727 CXWJ01019461 [CXWJ] wastewater metagenome; activated sludge 766 676 - Ser GGA [ENA] ¢þ
>WENV170559615 CXWL01134074 [CXWL] groundwater metagenome; biofilm material 573 663 + Ser GGA [ENA] ¢þ
>C191064742 CP029606 Betaproteobacteria Methylibium sp. Pch-M [CP029606] 3756764 3756854 + Ser GGA - ¡û
>W09101365 AAEM01000001 Betaproteobacteria Methylibium petroleiphilum PM1 [AAEM] 766123 766213 + Ser GGA [ENA] ¡û
>SRA1003734 SRR002327.150987 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 158 68 - Ser GGA [SRA]
>W1810666665 QJOU01000060 Betaproteobacteria Piscinibacter caeni MQ-18 [QJOU] 15974 16064 + Ser GGA [ENA] ¡û
>W1510021362 BBYR01000041 Betaproteobacteria Piscinibacter sakaiensis 201-F6 [BBYR] 50801 50711 - Ser GGA [ENA] ¡û
>W1511552115 JZUE01000017 Betaproteobacteria Aquincola tertiaricarbonis MIMtkpLc11 [JZUE] 127466 127556 + Ser GGA [ENA] ¡û
>WENV074550 AACY023982647 Marine microbial communities from Global Ocean Sampling (GOS) 104 12 - Ser GGA [ENA]
>W1610724195 LMDY01000001 Betaproteobacteria Methylibium sp. Root1272 [LMDY] 488558 488648 + Ser GGA [ENA] ¡û
Identical group No.22052 (88 seq.)
>W1710867406 LMIG01000003 Alphaproteobacteria Sphingopyxis sp. Root214 [LMIG] 1129296 1129206 - Ser GGA [ENA] ¡û
>W1710870184 LMKH01000036 Alphaproteobacteria Sphingomonas sp. Leaf208 [LMKH] 312468 312378 - Ser GGA [ENA] ¡û
>W1710870906 LMKW01000010 Alphaproteobacteria Sphingomonas sp. Leaf230 [LMKW] 14808 14718 - Ser GGA [ENA] ¡û
>W1710871245 LMLD01000015 Alphaproteobacteria Sphingomonas sp. Leaf38 [LMLD] 41055 41145 + Ser GGA [ENA] ¡û
>W1710872323 LMLW01000013 Alphaproteobacteria Sphingomonas sp. Leaf242 [LMLW] 98269 98359 + Ser GGA [ENA] ¡û
>W1710877229 LMPX01000003 Alphaproteobacteria Sphingomonas sp. Leaf198 [LMPX] 591526 591616 + Ser GGA [ENA] ¡û
>W1710912528 LNRR01000006 Alphaproteobacteria Sphingopyxis sp. H005 [LNRR] 25954 25864 - Ser GGA [ENA] ¡û
>W1710912625 LNRT01000012 Alphaproteobacteria Sphingopyxis sp. H038 [LNRT] 158036 158126 + Ser GGA [ENA] ¡û
>W1710913013 LNSC01000025 Alphaproteobacteria Sphingopyxis sp. HXXIV [LNSC] 14393 14483 + Ser GGA [ENA] ¡û
>W1710913057 LNSD01000005 Alphaproteobacteria Sphingopyxis sp. H057 [LNSD] 152585 152675 + Ser GGA [ENA] ¡û
>W1711072366 LSHN01000044 Alphaproteobacteria Blastomonas sp. CCH13-E1 [LSHN] 138 48 - Ser GGA [ENA] ¡û
>W1711072580 LSHS01000110 Alphaproteobacteria Blastomonas sp. CCH8-A3 [LSHS] 167368 167278 - Ser GGA [ENA] ¡û
>W1711072640 LSHU01000002 Alphaproteobacteria Blastomonas sp. CCH7-E1 [LSHU] 43570 43660 + Ser GGA [ENA] ¡û
>W1711072842 LSHZ01000025 Alphaproteobacteria Blastomonas sp. CCH4-D12 [LSHZ] 5437 5527 + Ser GGA [ENA] ¡û
>W1711075039 LSKB01000056 Alphaproteobacteria Blastomonas sp. CCH11-A4 [LSKB] 70765 70675 - Ser GGA [ENA] ¡û
>W1711146776 LVJD01000261 Alphaproteobacteria Sphingobium yanoikuyae [LVJD] 9293 9203 - Ser GGA [ENA] ¡û
>W1712105797 NISJ01000016 Alphaproteobacteria Sphingopyxis witflariensis [NISJ] 28042 27952 - Ser GGA [ENA] ¡û
>W1712105841 NISK01000005 Alphaproteobacteria Sphingopyxis bauzanensis [NISK] 108145 108055 - Ser GGA [ENA] ¡û
>C171094556 CP019449 Alphaproteobacteria Sphingopyxis sp. QXT-31 [CP019449] 1177003 1177093 + Ser GGA - ¡û
>C171095057 CP019511 Alphaproteobacteria Sphingomonas sp. LM7 [CP019511] 2763298 2763388 + Ser GGA - ¡û
>C171108880 CP020538 Alphaproteobacteria Sphingobium herbicidovorans MH [CP020538] 1099916 1099826 - Ser GGA - ¡û
>C171128440 LT598653 Alphaproteobacteria uncultured Sphingopyxis sp. [LT598653] 1697090 1697000 - Ser GGA - ¡û
>W131002989 AGZU01000007 Alphaproteobacteria Sphingobium yanoikuyae ATCC 51230 [AGZU] 278713 278803 + Ser GGA [ENA] ¡û
>W131058863 ANFZ01000006 Alphaproteobacteria Blastomonas sp. AAP53 [ANFZ] 389183 389093 - Ser GGA [ENA] ¡û
>W131160203 AQWK01000001 Alphaproteobacteria Novosphingobium nitrogenifigens DSM 19370 [AQWK] 334889 334799 - Ser GGA [ENA] ¡û
>W131196375 ASTG01000024 Alphaproteobacteria Sphingobium bisphenolivorans YL23 [ASTG] 42674 42584 - Ser GGA [ENA] ¡û
>C019729 CP000356 Alphaproteobacteria Sphingopyxis alaskensis RB2256 [CP000356] 1688353 1688443 + Ser GGA [Ensembl] ¡û
>WENV180105126 OAPD01007384 [OAPD] marine metagenome; 2010 581 671 + Ser GGA [ENA] ¢þ
>W141193341 AYSC01000031 Alphaproteobacteria Blastomonas sp. CACIA14H2 [AYSC] 47136 47046 - Ser GGA [ENA] ¡û
>WENV170379891 CETV01249451 [CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 851 761 - Ser GGA [ENA] ¢þ
>WENV170709919 LNFM01000919 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 68127 68217 + Ser GGA [ENA] ¢þ
>WENV170735580 LULL01004537 [LULL] marine metagenome; Red Sea water column Station 149 - depth 500m 713 623 - Ser GGA [ENA] ¢þ
>WENV170745655 LULY01022250 [LULY] marine metagenome; Red Sea water column Station 91 - depth 200m 618 708 + Ser GGA [ENA] ¢þ
>WENV170761393 LUMV01000185 [LUMV] marine metagenome; Red Sea water column Station 192 - depth 200m 6866 6776 - Ser GGA [ENA] ¢þ
>WENV170974945 MTKY01081665 [MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant 1171 1261 + Ser GGA [ENA] ¢þ
>C191002750 AP018518 Alphaproteobacteria Sphingobium sp. YG1 [AP018518, AP018519] 3246958 3247048 + Ser GGA - ¡û
>C191163782 CP039249 Alphaproteobacteria Sphingomonas sp. PAMC26645 [CP039249] 137145 137055 - Ser GGA - ¡û
>C191185545 CP041016 Alphaproteobacteria Sphingobium fuliginis ATCC 27551 [CP041016, CP041017] 3786721 3786811 + Ser GGA - ¡û
>W1911718563 QQWL01000003 Alphaproteobacteria Sphingomonas koreensis SK-NIH.Env11_0417 [QQWL] 64564 64474 - Ser GGA [ENA] ¡û
>W1911718839 QQWR01000007 Alphaproteobacteria Sphingomonas koreensis SK-NIH.Pt10_0210 [QQWR] 109126 109216 + Ser GGA [ENA] ¡û
>W1911719248 QQXA01000002 Alphaproteobacteria Sphingomonas koreensis SK-NIH.Pt14_0612 [QQXA] 179241 179331 + Ser GGA [ENA] ¡û
>W1911719319 QQXB01000006 Alphaproteobacteria Sphingomonas koreensis SK-NIH.Pt16_1112 [QQXB] 179293 179383 + Ser GGA [ENA] ¡û
>W1911720597 QQYH01000004 Alphaproteobacteria Sphingomonas koreensis SK-NIH.Env40_0817 [QQYH] 79851 79761 - Ser GGA [ENA] ¡û
>W1911720871 QQYN01000003 Alphaproteobacteria Sphingomonas koreensis SK-NIH.Env34_0717 [QQYN] 154508 154418 - Ser GGA [ENA] ¡û
>W1911721154 QQYT01000005 Alphaproteobacteria Sphingomonas koreensis SK-NIH.Env28_0717 [QQYT] 135729 135639 - Ser GGA [ENA] ¡û
>W1911721559 QQZC01000006 Alphaproteobacteria Sphingomonas koreensis SK-NIH.Env22_0617 [QQZC] 135729 135639 - Ser GGA [ENA] ¡û
>SRA1003198 SRR002326.299386 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 74 164 + Ser GGA [SRA]
>SRA1003611 SRR002327.67714 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 189 99 - Ser GGA [SRA]
>SRA1003718 SRR002327.143032 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 237 147 - Ser GGA [SRA]
>W1810476729 QAOF01000008 Alphaproteobacteria Sphingomonas sp. PP-CE-3G-477 [QAOF] 68829 68739 - Ser GGA [ENA] ¡û
>W1810486913 QAYE01000009 Alphaproteobacteria Sphingomonas faeni MA-olki [QAYE] 231094 231184 + Ser GGA [ENA] ¡û
>W1810658668 QJJM01000004 Alphaproteobacteria Blastomonas natatoria DSM 3183 [QJJM] 171433 171523 + Ser GGA [ENA] ¡û
>W1810677137 QKMM01000013 Alphaproteobacteria Novosphingobium sp. B3058 49 [QKMM] 88336 88426 + Ser GGA [ENA] ¡û
>SRA1014211 SRR023845.40899 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 120 210 + Ser GGA [SRA]
>SRA1014270 SRR023845.66824 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 23 113 + Ser GGA [SRA]
>SRA1014344 SRR023845.98183 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 70 160 + Ser GGA [SRA]
>SRA1014695 SRR023845.267065 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 136 46 - Ser GGA [SRA]
>SRA1014752 SRR023845.299518 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 86 176 + Ser GGA [SRA]
>SRA1014881 SRR023845.360767 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 120 210 + Ser GGA [SRA]
>SRA1015165 SRR023845.483365 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 239 149 - Ser GGA [SRA]
>SRA1015825 SRR023846.215393 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 73 163 + Ser GGA [SRA]
>SRA1016474 SRR023846.517298 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 104 194 + Ser GGA [SRA]
>C151044379 CP009122 Alphaproteobacteria Sphingopyxis fribergensis Kp5.2 [CP009122] 2268676 2268766 + Ser GGA [Ensembl] ¡û
>W1510019749 BBXA01000029 Alphaproteobacteria Novosphingobium sp. MD-1 [BBXA] 49008 49098 + Ser GGA [ENA] ¡û
>W11176451 AFXE01000128 Alphaproteobacteria Sphingobium yanoikuyae XLDN2-5 [AFXE] 14140 14050 - Ser GGA [ENA] ¡û
>C161054528 CP013264 Alphaproteobacteria Sphingobium baderi DE-13 [CP013264] 1005058 1005148 + Ser GGA [Ensembl] ¡û
>C161055627 CP013342 Alphaproteobacteria Sphingopyxis terrae subsp. terrae NBRC 15098 203-1 [CP013342] 2798815 2798725 - Ser GGA [Ensembl] ¡û
>W121086737 AKKE01000127 Alphaproteobacteria Novosphingobium sp. AP12 [AKKE] 27888 27798 - Ser GGA [ENA] ¡û
>W1610072040 BCUN01000064 Alphaproteobacteria Sphingobium amiense NBRC 102518 [BCUN] 5222 5132 - Ser GGA [ENA] ¡û
>W1610550591 JXQC01000003 Alphaproteobacteria Erythrobacter sp. SG61-1L [JXQC] 2146610 2146520 - Ser GGA [ENA] ¡û
>W1610732530 LMKH01000036 Alphaproteobacteria Sphingomonas sp. Leaf208 [LMKH] 312468 312378 - Ser GGA [ENA] ¡û
>W1610733252 LMKW01000010 Alphaproteobacteria Sphingomonas sp. Leaf230 [LMKW] 14808 14718 - Ser GGA [ENA] ¡û
>W1610734669 LMLW01000013 Alphaproteobacteria Sphingomonas sp. Leaf242 [LMLW] 98269 98359 + Ser GGA [ENA] ¡û
>W1610739575 LMPX01000003 Alphaproteobacteria Sphingomonas sp. Leaf198 [LMPX] 591526 591616 + Ser GGA [ENA] ¡û
>W1610770887 LNRR01000006 Alphaproteobacteria Sphingopyxis sp. H005 [LNRR] 25954 25864 - Ser GGA [ENA] ¡û
>W1610770984 LNRT01000012 Alphaproteobacteria Sphingopyxis sp. H038 [LNRT] 158036 158126 + Ser GGA [ENA] ¡û
>W1610771372 LNSC01000025 Alphaproteobacteria Sphingopyxis sp. HXXIV [LNSC] 14393 14483 + Ser GGA [ENA] ¡û
>W1610771416 LNSD01000005 Alphaproteobacteria Sphingopyxis sp. H057 [LNSD] 152585 152675 + Ser GGA [ENA] ¡û
>W1610911626 LSHN01000044 Alphaproteobacteria Blastomonas sp. CCH13-E1 [LSHN] 138 48 - Ser GGA [ENA] ¡û
>W1610911840 LSHS01000110 Alphaproteobacteria Blastomonas sp. CCH8-A3 [LSHS] 167368 167278 - Ser GGA [ENA] ¡û
>W1610911900 LSHU01000002 Alphaproteobacteria Blastomonas sp. CCH7-E1 [LSHU] 43570 43660 + Ser GGA [ENA] ¡û
>W1610912102 LSHZ01000025 Alphaproteobacteria Blastomonas sp. CCH4-D12 [LSHZ] 5437 5527 + Ser GGA [ENA] ¡û
>W1610914344 LSKB01000056 Alphaproteobacteria Blastomonas sp. CCH11-A4 [LSKB] 70765 70675 - Ser GGA [ENA] ¡û
>W1710069242 BCUN01000064 Alphaproteobacteria Sphingobium amiense NBRC 102518 [BCUN] 5222 5132 - Ser GGA [ENA] ¡û
>W1710571540 FOVZ01000006 Alphaproteobacteria Sphingomonas sp. OK281 [FOVZ] 241997 242087 + Ser GGA [ENA] ¡û
>W1710573617 FOXP01000008 Alphaproteobacteria Sphingomonas rubra [FOXP] 155484 155574 + Ser GGA [ENA] ¡û
>W1710592156 FRCG01000004 Alphaproteobacteria Sphingobium sp. YR657 [FRCG] 455884 455794 - Ser GGA [ENA] ¡û
>W1710660354 JXQC01000003 Alphaproteobacteria Erythrobacter sp. SG61-1L [JXQC] 2146610 2146520 - Ser GGA [ENA] ¡û
Identical group No.23042 (1 seq.)
>SRA1002985 SRR002326.136529 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 46 136 + Ser GGA [SRA]
Identical group No.23044 (1 seq.)
>SRA1003143 SRR002326.239915 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 114 204 + Ser GGA [SRA]
Identical group No.24558 (1 seq.)
>SRA1003767 SRR002327.170743 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 204 291 + Ser GGA [SRA]
Identical group No.34296 (3 seq.)
>WENV181379414 OFRD01001269 [OFRD] wastewater metagenome; Exp Tend CN 100WW 4556 4645 + Ser GGA [ENA] ¢þ
>SRA1002997 SRR002326.145056 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 147 58 - Ser GGA [SRA]
>SRA1004006 SRR002328.91900 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 115 204 + Ser GGA [SRA]
Identical group No.34297 (1 seq.)
>SRA1003047 SRR002326.170029 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 45 134 + Ser GGA [SRA]
Identical group No.34298 (7 seq.)
>W141265969 CCJP01000005 Betaproteobacteria Polaromonas sp. CG9_12 CJ2 [CCJP] 159901 159990 + Ser GGA [ENA] ¡û
>W141565129 JIBH01000001 Betaproteobacteria Polaromonas sp. EUR3 1.2.1 [JIBH] 1826904 1826815 - Ser GGA [ENA] ¡û
>W1910699886 MERZ01000203 Betaproteobacteria Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_61_11 [MERZ] 153 242 + Ser GGA [ENA] ¡û
>SRA1003123 SRR002326.220178 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 60 149 + Ser GGA [SRA]
>SRA1003559 SRR002327.31702 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 98 9 - Ser GGA [SRA]
>W1610076217 BCYO01000025 Betaproteobacteria Polaromonas jejuensis NBRC 106434 [BCYO] 2006 1917 - Ser GGA [ENA] ¡û
>W1710074032 BCYO01000025 Betaproteobacteria Polaromonas jejuensis NBRC 106434 [BCYO] 2006 1917 - Ser GGA [ENA] ¡û
Identical group No.34302 (1 seq.)
>SRA1003391 SRR002326.432974 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 94 5 - Ser GGA [SRA]
Identical group No.34630 (18 seq.)
>W141023471 AJXL01000049 Bacteroidota Flavobacterium sp. ACAM 123 [AJXL] 6626 6537 - Ser GGA [ENA] ¡û
>WENV181379392 OFRD01001083 [OFRD] wastewater metagenome; Exp Tend CN 100WW 2673 2760 + Ser GGA [ENA] ¢þ
>WENV181384106 OFRH01017887 [OFRH] wastewater metagenome; Exp Tend NO 100WW 118 31 - Ser GGA [ENA] ¢þ
>WENV183621230 OOFT01023009 [OOFT] marine metagenome; sea ice 564 651 + Ser GGA [ENA] ¢þ
>WENV170559849 CXWL01161303 [CXWL] groundwater metagenome; biofilm material 1545 1634 + Ser GGA [ENA] ¢þ
>W1810072199 PEFE01000001 Bacteroidota Flavobacterium sp. 11 [PEFE] 684981 684894 - Ser GGA [ENA] ¡û
>W1810121187 PHUE01000001 Bacteroidota Flavobacterium sp. 5 [PHUE] 1728787 1728700 - Ser GGA [ENA] ¡û
>W1810156537 PJBJ01000030 Bacteroidota Flavobacterium sp. ALD4 [PJBJ] 1137075 1137162 + Ser GGA [ENA] ¡û
>SRA1003836 SRR002327.220806 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 223 136 - Ser GGA [SRA]
>W1810722608 QNUX01000011 Bacteroidota Flavobacterium psychrolimnae LMG 22018 [QNUX] 57597 57684 + Ser GGA [ENA] ¡û
>W1810723020 QNVY01000001 Bacteroidota Flavobacterium petrolei Kopri-42 [QNVY] 240937 240850 - Ser GGA [ENA] ¡û
>W1511390938 JSYM01000004 Bacteroidota Flavobacterium sp. AED [JSYM] 59167 59078 - Ser GGA [ENA] ¡û
>W1710517097 FNDB01000003 Bacteroidota Flavobacterium omnivorum [FNDB] 275533 275444 - Ser GGA [ENA] ¡û
>W1710533469 FNRD01000002 Bacteroidota Flavobacterium gillisiae [FNRD] 66473 66384 - Ser GGA [ENA] ¡û
>W1710539659 FNVP01000001 Bacteroidota Flavobacterium urumqiense [FNVP] 252796 252707 - Ser GGA [ENA] ¡û
>W1710548166 FODN01000007 Bacteroidota Flavobacterium sinopsychrotolerans [FODN] 168760 168849 + Ser GGA [ENA] ¡û
>W1710551340 FOFZ01000011 Bacteroidota Flavobacterium frigoris [FOFZ] 40918 41007 + Ser GGA [ENA] ¡û
>W1710592412 FRCL01000002 Bacteroidota Flavobacterium xinjiangense [FRCL] 128825 128912 + Ser GGA [ENA] ¡û
Identical group No.36028 (3 seq.)
>WENV170995777 MWWF01056854 [MWWF] soil metagenome; MGM-3 sample; Antarctic (ecotone) soil 227 316 + Ser GGA [ENA] ¢þ
>WENV170996054 MWWF01129185 [MWWF] soil metagenome; MGM-3 sample; Antarctic (ecotone) soil 422 511 + Ser GGA [ENA] ¢þ
>SRA1003917 SRR002328.33775 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 82 169 + Ser GGA [SRA]
Identical group No.36819 (1 seq.)
>SRA1003788 SRR002327.186129 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 158 69 - Ser GGA [SRA]
Identical group No.36820 (4 seq.)
>C017302 CP000529 Betaproteobacteria Polaromonas naphthalenivorans CJ2 [CP000529] 2152465 2152554 + Ser GGA [Ensembl] ¡û
>W09104863 AANM01000006 Betaproteobacteria Polaromonas naphthalenivorans CJ2 [AANM] 234160 234071 - Ser GGA [ENA] ¡û
>W141695468 JMDZ01000004 Betaproteobacteria Polaromonas glacialis [JMDZ] 80918 80829 - Ser GGA [ENA] ¡û
>SRA1003797 SRR002327.189487 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 259 170 - Ser GGA [SRA]
Identical group No.36821 (3 seq.)
>WENV181315227 OFJN01015515 [OFJN] marine metagenome; sea ice 98 187 + Ser GGA [ENA] ¢þ
>WENV181324186 OFLC01003434 [OFLC] marine metagenome; melt pond 746 835 + Ser GGA [ENA] ¢þ
>SRA1003845 SRR002327.227510 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 204 115 - Ser GGA [SRA]
Identical group No.58588 (85 seq.)
>W1710853229 LLWK01000038 Bacteroidota Flavobacterium sp. TAB 87 [LLWK] 627783 627868 + Ser GGA [ENA] ¡û
>W1710914563 LNTP01000401 Bacteroidota Flavobacterium psychrophilum [LNTP] 40681 40594 - Ser GGA [ENA] ¡û
>W1710914599 LNTQ01000146 Bacteroidota Flavobacterium psychrophilum [LNTQ] 58134 58221 + Ser GGA [ENA] ¡û
>W1711054002 LRTL01000006 Bacteroidota Flavobacterium psychrophilum [LRTL] 340649 340734 + Ser GGA [ENA] ¡û
>W131225428 AUDO01000009 Bacteroidota Flavobacterium frigidarium DSM 17623 [AUDO] 37045 36958 - Ser GGA [ENA] ¡û
>W1711431513 MIJV01000031 Bacteroidota Flavobacterium psychrophilum [MIJV] 107885 107972 + Ser GGA [ENA] ¡û
>W1711431542 MIJW01000027 Bacteroidota Flavobacterium psychrophilum [MIJW] 112318 112403 + Ser GGA [ENA] ¡û
>W1711712471 MTBY01000038 Bacteroidota Flavobacterium psychrophilum [MTBY] 100132 100219 + Ser GGA [ENA] ¡û
>W1711712504 MTBZ01000033 Bacteroidota Flavobacterium psychrophilum [MTBZ] 100776 100861 + Ser GGA [ENA] ¡û
>W1711712593 MTCB01000020 Bacteroidota Flavobacterium psychrophilum [MTCB] 106116 106203 + Ser GGA [ENA] ¡û
>W1711712626 MTCC01000022 Bacteroidota Flavobacterium psychrophilum [MTCC] 108286 108373 + Ser GGA [ENA] ¡û
>W1711712642 MTCD01000064 Bacteroidota Flavobacterium psychrophilum [MTCD] 1565 1478 - Ser GGA [ENA] ¡û
>C009509 AM398681 Bacteroidota Flavobacterium psychrophilum JIP02/86 [AM398681] 2624029 2624116 + Ser GGA [Ensembl] ¡û
>WENV180391224 OBPM01046922 [OBPM] marine metagenome; ENVO:00002010 245 330 + Ser GGA [ENA] ¢þ
>C181220269 LT670843 Bacteroidota Flavobacterium psychrophilum OSU THCO2-90 [LT670843] 2602337 2602422 + Ser GGA - ¡û
>W1910184570 BJSV01000009 Bacteroidota Flavobacterium psychrophilum NNS1-1804 [BJSV] 46854 46939 + Ser GGA [ENA] ¡û
>W1910184612 BJSW01000010 Bacteroidota Flavobacterium psychrophilum NNS2-1804 [BJSW] 47028 47113 + Ser GGA [ENA] ¡û
>W1910184657 BJSX01000033 Bacteroidota Flavobacterium psychrophilum NNS4-1804 [BJSX] 48218 48303 + Ser GGA [ENA] ¡û
>W1910184704 BJSY01000049 Bacteroidota Flavobacterium psychrophilum NNS5-1804 [BJSY] 46842 46927 + Ser GGA [ENA] ¡û
>W1910184723 BJSZ01000007 Bacteroidota Flavobacterium psychrophilum NNS6-1804 [BJSZ] 24965 24880 - Ser GGA [ENA] ¡û
>W1910184763 BJTA01000010 Bacteroidota Flavobacterium psychrophilum NNS7-1804 [BJTA] 24965 24880 - Ser GGA [ENA] ¡û
>W1910184865 BJTD01000003 Bacteroidota Flavobacterium psychrophilum KKAC-1706 [BJTD] 1121 1036 - Ser GGA [ENA] ¡û
>W1910184911 BJTE01000014 Bacteroidota Flavobacterium psychrophilum KKOK-1706 [BJTE] 938 853 - Ser GGA [ENA] ¡û
>W1910184958 BJTF01000027 Bacteroidota Flavobacterium psychrophilum KHIR-1705 [BJTF] 790 705 - Ser GGA [ENA] ¡û
>W1910502973 FYBY01000008 Bacteroidota Flavobacterium psychrophilum CH8 [FYBY] 40610 40525 - Ser GGA [ENA] ¡û
>W1910503015 FYBZ01000023 Bacteroidota Flavobacterium psychrophilum FRGDSA 1882/11 [FYBZ] 3188 3103 - Ser GGA [ENA] ¡û
>W1910503053 FYCA01000041 Bacteroidota Flavobacterium psychrophilum FI055 [FYCA] 35811 35726 - Ser GGA [ENA] ¡û
>W1910503096 FYCB01000062 Bacteroidota Flavobacterium psychrophilum DK150 [FYCB] 868 783 - Ser GGA [ENA] ¡û
>W1910503111 FYCC01000022 Bacteroidota Flavobacterium psychrophilum FI056 [FYCC] 168379 168294 - Ser GGA [ENA] ¡û
>W1910503154 FYCD01000035 Bacteroidota Flavobacterium psychrophilum DK001 [FYCD] 126467 126382 - Ser GGA [ENA] ¡û
>W1910503181 FYCE01000040 Bacteroidota Flavobacterium psychrophilum FI146 [FYCE] 244 159 - Ser GGA [ENA] ¡û
>W1910503225 FYCF01000035 Bacteroidota Flavobacterium psychrophilum DK002 [FYCF] 168431 168346 - Ser GGA [ENA] ¡û
>W1910503254 FYCG01000038 Bacteroidota Flavobacterium psychrophilum FI070 [FYCG] 56697 56782 + Ser GGA [ENA] ¡û
>W1910503291 FYCH01000034 Bacteroidota Flavobacterium psychrophilum CH1895 [FYCH] 51569 51654 + Ser GGA [ENA] ¡û
>W1910503321 FYCI01000042 Bacteroidota Flavobacterium psychrophilum DK095 [FYCI] 67950 68035 + Ser GGA [ENA] ¡û
>W1910503539 FYCN01000063 Bacteroidota Flavobacterium psychrophilum JIP 08/99 [FYCN] 9099 9014 - Ser GGA [ENA] ¡û
>W1910503555 FYCO01000003 Bacteroidota Flavobacterium psychrophilum IT02 [FYCO] 51640 51725 + Ser GGA [ENA] ¡û
>W1910503606 FYCP01000136 Bacteroidota Flavobacterium psychrophilum KU 051128-10 [FYCP] 46736 46821 + Ser GGA [ENA] ¡û
>W1910503622 FYCQ01000124 Bacteroidota Flavobacterium psychrophilum KU 061128-1 [FYCQ] 46748 46833 + Ser GGA [ENA] ¡û
>W1910503637 FYCR01000026 Bacteroidota Flavobacterium psychrophilum JIP 16/00 [FYCR] 13859 13944 + Ser GGA [ENA] ¡û
>W1910503659 FYCS01000015 Bacteroidota Flavobacterium psychrophilum IT09 [FYCS] 51569 51654 + Ser GGA [ENA] ¡û
>W1910503723 FYCT01000062 Bacteroidota Flavobacterium psychrophilum FI166 [FYCT] 46837 46922 + Ser GGA [ENA] ¡û
>W1910503734 FYCU01000118 Bacteroidota Flavobacterium psychrophilum KU 060626-4 [FYCU] 48212 48297 + Ser GGA [ENA] ¡û
>W1910503759 FYCV01000140 Bacteroidota Flavobacterium psychrophilum KU 060626-59 [FYCV] 197 112 - Ser GGA [ENA] ¡û
>W1910503771 FYCW01000003 Bacteroidota Flavobacterium psychrophilum LM-01-Fp [FYCW] 18590 18505 - Ser GGA [ENA] ¡û
>W1910503807 FYCX01000001 Bacteroidota Flavobacterium psychrophilum NO004 [FYCX] 49221 49306 + Ser GGA [ENA] ¡û
>W1910503873 FYCY01000056 Bacteroidota Flavobacterium psychrophilum NO014 [FYCY] 40608 40523 - Ser GGA [ENA] ¡û
>W1910503908 FYCZ01000034 Bacteroidota Flavobacterium psychrophilum LM-02-Fp [FYCZ] 51569 51654 + Ser GGA [ENA] ¡û
>W1910503917 FYDA01000001 Bacteroidota Flavobacterium psychrophilum NO042 [FYDA] 854 769 - Ser GGA [ENA] ¡û
>W1910503981 FYDB01000047 Bacteroidota Flavobacterium psychrophilum NO098 [FYDB] 313346 313261 - Ser GGA [ENA] ¡û
>W1910503992 FYDC01000003 Bacteroidota Flavobacterium psychrophilum NO083 [FYDC] 168433 168348 - Ser GGA [ENA] ¡û
>W1910504129 FYDF01000102 Bacteroidota Flavobacterium psychrophilum LVDJ XP189 [FYDF] 286 201 - Ser GGA [ENA] ¡û
>W1910576496 JSCD01000009 Bacteroidota Flavobacterium psychrophilum 10 [JSCD] 25843 25758 - Ser GGA [ENA] ¡û
>W1910576617 JSWL01000002 Bacteroidota Flavobacterium psychrophilum IWL08 [JSWL] 106116 106201 + Ser GGA [ENA] ¡û
>W1910809510 MUHE01000025 Bacteroidota Flavobacterium psychrophilum DSM 3660 = ATCC 49418 [MUHE] 790 705 - Ser GGA [ENA] ¡û
>SRA1003537 SRR002327.6983 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 163 78 - Ser GGA [SRA]
>C151018505 CP007206 Bacteroidota Flavobacterium psychrophilum FPG101 [CP007206] 2611254 2611341 + Ser GGA [Ensembl] ¡û
>C151018562 CP007207 Bacteroidota Flavobacterium psychrophilum FPG3 [CP007207] 2535755 2535840 + Ser GGA [Ensembl] ¡û
>C151030341 CP007627 Bacteroidota Flavobacterium psychrophilum CSF259-93 [CP007627] 2660832 2660919 + Ser GGA [Ensembl] ¡û
>C151038971 CP008878 Bacteroidota Flavobacterium psychrophilum V3-5 [CP008878] 2438523 2438610 + Ser GGA [Ensembl] ¡û
>C151039007 CP008881 Bacteroidota Flavobacterium psychrophilum V4-24 [CP008881] 2424927 2425014 + Ser GGA [Ensembl] ¡û
>C151039044 CP008883 Bacteroidota Flavobacterium psychrophilum v4-33 [CP008883] 2439873 2439960 + Ser GGA [Ensembl] ¡û
>C151039536 CP008902 Bacteroidota Flavobacterium psychrophilum 950106-1/1 [CP008902] 2476838 2476925 + Ser GGA [Ensembl] ¡û
>C151065061 CP010274 Bacteroidota Flavobacterium psychrophilum 5 [CP010274] 2610301 2610388 + Ser GGA - ¡û
>C151065109 CP010276 Bacteroidota Flavobacterium psychrophilum PG2 [CP010276] 2612618 2612705 + Ser GGA - ¡û
>C151072389 CP010798 Bacteroidota Flavobacterium psychrophilum [CP010798] 2084730 2084815 + Ser GGA - ¡û
>W1511357172 JRWA01000009 Bacteroidota Flavobacterium psychrophilum CSF-259-93 [JRWA] 54457 54544 + Ser GGA [ENA] ¡û
>W1511357214 JRWB01000025 Bacteroidota Flavobacterium psychrophilum CN [JRWB] 54449 54536 + Ser GGA [ENA] ¡û
>W1511357256 JRWC01000007 Bacteroidota Flavobacterium psychrophilum CR [JRWC] 54442 54529 + Ser GGA [ENA] ¡û
>W1511357304 JRWD01000118 Bacteroidota Flavobacterium psychrophilum THC 02-90 [JRWD] 16708 16793 + Ser GGA [ENA] ¡û
>W1511357351 JRWE01000119 Bacteroidota Flavobacterium psychrophilum TN [JRWE] 16708 16793 + Ser GGA [ENA] ¡û
>W1511357398 JRWF01000112 Bacteroidota Flavobacterium psychrophilum TR [JRWF] 16707 16792 + Ser GGA [ENA] ¡û
>C161024428 CP010275 Bacteroidota Flavobacterium psychrophilum MH1 [CP010275] 2609797 2609884 + Ser GGA - ¡û
>C161024476 CP010277 Bacteroidota Flavobacterium psychrophilum VQ50 [CP010277] 2568760 2568847 + Ser GGA - ¡û
>C161024524 CP010278 Bacteroidota Flavobacterium psychrophilum 3 [CP010278] 2567394 2567481 + Ser GGA - ¡û
>W1610062191 BCNG01000016 Bacteroidota Flavobacterium psychrophilum [BCNG] 285 200 - Ser GGA [ENA] ¡û
>W1610716353 LLWK01000038 Bacteroidota Flavobacterium sp. TAB 87 [LLWK] 627783 627868 + Ser GGA [ENA] ¡û
>W1610772922 LNTP01000401 Bacteroidota Flavobacterium psychrophilum [LNTP] 40681 40594 - Ser GGA [ENA] ¡û
>W1610772958 LNTQ01000146 Bacteroidota Flavobacterium psychrophilum [LNTQ] 58134 58221 + Ser GGA [ENA] ¡û
>W1610895190 LRTL01000006 Bacteroidota Flavobacterium psychrophilum [LRTL] 340649 340734 + Ser GGA [ENA] ¡û
>W1710059732 BCNG01000016 Bacteroidota Flavobacterium psychrophilum [BCNG] 285 200 - Ser GGA [ENA] ¡û
>W1710087863 BDSH01000014 Bacteroidota Flavobacterium psychrophilum [BDSH] 43005 43090 + Ser GGA [ENA] ¡û
>W1710507316 FMVE01000003 Bacteroidota Flavobacterium psychrophilum DSM 3660 [FMVE] 131890 131805 - Ser GGA [ENA] ¡û
>W1710555826 FOJT01000003 Bacteroidota Flavobacterium swingsii [FOJT] 234251 234164 - Ser GGA [ENA] ¡û
>W1710585196 FQWE01000002 Bacteroidota Flavobacterium segetis [FQWE] 352217 352130 - Ser GGA [ENA] ¡û
Identical group No.59066 (10 seq.)
>C171100113 CP019799 Gammaproteobacteria Cellvibrio sp. PSBB023 [CP019799] 492609 492696 + Ser GGA - ¡û
>WENV180040856 LLBZ010018218 [LLBZ] soil metagenome; soil from tomato rhizosphere 2967 3054 + Ser GGA [ENA] ¢þ
>C08003226 CP000934 Gammaproteobacteria Cellvibrio japonicus Ueda107 [CP000934] 1806594 1806681 + Ser GGA [Ensembl] ¡û
>W1910911061 NHNI01000002 Gammaproteobacteria Cellvibrio mixtus PSBB022 [NHNI] 536887 536974 + Ser GGA [ENA] ¡û
>SRA1003676 SRR002327.115536 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 213 126 - Ser GGA [SRA]
>W1510018791 BBUL01000092 Gammaproteobacteria Cellvibrio sp. OA-2007 [BBUL] 120095 120008 - Ser GGA [ENA] ¡û
>W1511548618 JZSC01000002 Gammaproteobacteria Cellvibrio sp. pealriver [JZSC] 7481 7568 + Ser GGA [ENA] ¡û
>W121045186 AICM01000004 Gammaproteobacteria Cellvibrio sp. BR [AICM] 143465 143378 - Ser GGA [ENA] ¡û
>W1610005697 ALBT01000003 Gammaproteobacteria Cellvibrio mixtus subsp. mixtus J3-8 [ALBT] 6379 6466 + Ser GGA [ENA] ¡û
>W1710005458 ALBT01000003 Gammaproteobacteria Cellvibrio mixtus subsp. mixtus J3-8 [ALBT] 6379 6466 + Ser GGA [ENA] ¡û
Identical group No.60843 (1 seq.)
>SRA1003105 SRR002326.200485 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 238 150 - Ser GGA [SRA]
Identical group No.67403 (1 seq.)
>SRA1004229 SRR002328.212721 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 118 205 + Ser GGA [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK