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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183552367
OOBJ01003847
235146
Actinomycetota
CGT
Thr
>WENV183551824
OOBJ01000105
119475
Actinomycetota
TAA
Leu
>WENV183552171
OOBJ01001191
235153
Actinomycetota
CCT
Arg
>WENV183551739
OOBJ01000045
37070
Actinomycetota
CGA
Ser
>WENV183552503
OOBJ01008682
201717
Actinomycetota
CTT
Lys
>WENV183552111
OOBJ01000834
235092
Actinomycetota
CCG
Arg
>WENV183551991
OOBJ01000382
241403
Actinomycetota
GGC
Ala
>WENV183552825
OOBJ01059534
411601
Actinomycetota
CCC
Gly
>WENV183551771
OOBJ01000055
16219
Actinomycetota
GCT
Ser
>WENV183552180
OOBJ01001246
235174
Actinomycetota
TGC
Ala
>WENV183552081
OOBJ01000701
235101
Actinomycetota
TTT
Lys
>WENV183551742
OOBJ01000045
144625
Actinomycetota
GTC
Asp
>WENV183551737
OOBJ01000045
144625
Actinomycetota
GTC
Asp
>WENV183552523
OOBJ01009862
153948
Actinomycetota
GGG
Pro
>WENV183552775
OOBJ01035464
44862
Actinomycetota
CGA
Ser
>WENV183552086
OOBJ01000720
413665
Actinomycetota
TTG
Gln
>WENV183552647
OOBJ01019041
382278
Actinomycetota
GAC
Val
>WENV183551743
OOBJ01000045
144593
Actinomycetota
TAT
Ile
>WENV183552780
OOBJ01038200
144700
Actinomycetota
CAT
Met
>WENV183552612
OOBJ01016411
144636
Actinomycetota
GAT
Ile
>WENV183552610
OOBJ01016411
144636
Actinomycetota
GAT
Ile
>WENV183551769
OOBJ01000055
98279
Actinomycetota
GTA
Tyr
>WENV183552026
OOBJ01000491
338148
Actinomycetota
CTG
Gln
>WENV183552088
OOBJ01000720
235148
Actinomycetota
GTT
Asn
>WENV183551783
OOBJ01000062
235148
Actinomycetota
GTT
Asn
>WENV183552625
OOBJ01017415
53078
Actinomycetota
GGA
Ser
>WENV183552455
OOBJ01006944
176456
Actinomycetota
TCT
Arg
>WENV183552674
OOBJ01020841
144825
Actinomycetota
CAT
Met
>WENV183552578
OOBJ01013172
235348
Actinomycetota
CCT
Arg
>WENV183552444
OOBJ01006227
411554
Actinomycetota
CCC
Gly
>WENV183551925
OOBJ01000267
113601
Actinomycetota
TAG
Leu
>WENV183551825
OOBJ01000105
144595
Actinomycetota
CAA
Leu
>WENV183551789
OOBJ01000062
145343
Actinomycetota
GGG
Pro
>WENV183551790
OOBJ01000063
235149
Actinomycetota
CCT
Arg
>WENV183552267
OOBJ01002104
414234
Actinomycetota
CTG
Gln
>WENV183552380
OOBJ01004096
91808
Actinomycetota
CAG
Leu
>WENV183551924
OOBJ01000267
235121
Actinomycetota
CGT
Thr
>WENV183551741
OOBJ01000045
393408
Actinomycetota
TTC
Glu
>WENV183551989
OOBJ01000373
144635
Actinomycetota
TGG
Pro
>WENV183551740
OOBJ01000045
44851
Actinomycetota
TGA
Ser
>WENV183552752
OOBJ01032096
158513
Actinomycetota
TGG
Pro
>WENV183552087
OOBJ01000720
235173
Actinomycetota
GGC
Ala
>WENV183552314
OOBJ01002648
278447
Actinomycetota
GTG
His
>WENV183552680
OOBJ01022415
411599
Actinomycetota
TTG
Gln
>WENV183552632
OOBJ01017885
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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