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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183570498
OOCD01001793
235146
Actinomycetota
CGT
Thr
>WENV183570406
OOCD01001080
235347
Actinomycetota
GGC
Ala
>WENV183570266
OOCD01000310
235153
Actinomycetota
CCT
Arg
>WENV183570430
OOCD01001287
37070
Actinomycetota
CGA
Ser
>WENV183570701
OOCD01006129
201717
Actinomycetota
CTT
Lys
>WENV183570792
OOCD01011165
235194
Actinomycetota
GTG
His
>WENV183570496
OOCD01001793
273786
Actinomycetota
CGT
Thr
>WENV183570705
OOCD01006242
158720
Actinomycetota
ACG
Arg
>WENV183570659
OOCD01004638
245301
Actinomycetota
GCC
Gly
>WENV183570698
OOCD01006045
411601
Actinomycetota
CCC
Gly
>WENV183570375
OOCD01000800
23370
Actinomycetota
GCT
Ser
>WENV183570521
OOCD01002094
174149
Actinomycetota
GAT
Ile
>WENV183570456
OOCD01001483
338239
Actinomycetota
TTC
Glu
>WENV183570522
OOCD01002094
235174
Actinomycetota
TGC
Ala
>WENV183570108
OOCD01000056
235101
Actinomycetota
TTT
Lys
>WENV183570342
OOCD01000628
121510
Actinomycetota
TAA
Leu
>WENV183570565
OOCD01002794
145423
Actinomycetota
TCT
Arg
>WENV183570359
OOCD01000717
153948
Actinomycetota
GGG
Pro
>WENV183570599
OOCD01003506
235199
Actinomycetota
CAC
Val
>WENV183570320
OOCD01000504
198659
Actinomycetota
TAC
Val
>WENV183570405
OOCD01001080
413665
Actinomycetota
TTG
Gln
>WENV183570395
OOCD01001016
254857
Actinomycetota
CCG
Arg
>WENV183571114
OOCD01062211
144700
Actinomycetota
CAT
Met
>WENV183570663
OOCD01004721
144636
Actinomycetota
GAT
Ile
>WENV183570431
OOCD01001299
98279
Actinomycetota
GTA
Tyr
>WENV183570582
OOCD01003031
338148
Actinomycetota
CTG
Gln
>WENV183570791
OOCD01010899
235148
Actinomycetota
GTT
Asn
>WENV183570508
OOCD01001988
144825
Actinomycetota
CAT
Met
>WENV183570714
OOCD01006580
145347
Actinomycetota
CAA
Leu
>WENV183570606
OOCD01003632
235348
Actinomycetota
CCT
Arg
>WENV183570765
OOCD01008816
37521
Actinomycetota
GCT
Ser
>WENV183570167
OOCD01000143
411554
Actinomycetota
CCC
Gly
>WENV183570497
OOCD01001793
113601
Actinomycetota
TAG
Leu
>WENV183570864
OOCD01016241
144595
Actinomycetota
CAA
Leu
>WENV183570646
OOCD01004426
235149
Actinomycetota
CCT
Arg
>WENV183570296
OOCD01000413
414234
Actinomycetota
CTG
Gln
>WENV183570842
OOCD01014523
145269
Actinomycetota
CAT
Met
>WENV183570777
OOCD01009643
47164
Actinomycetota
GGA
Ser
>WENV183570721
OOCD01006799
144635
Actinomycetota
TGG
Pro
>WENV183570654
OOCD01004562
61501
Actinomycetota
CAG
Leu
>WENV183570393
OOCD01000971
119485
Actinomycetota
TAA
Leu
>WENV183570622
OOCD01003904
17009
Actinomycetota
GAG
Leu
>WENV183570168
OOCD01000143
80622
Actinomycetota
CAG
Leu
>WENV183570934
OOCD01023872
158513
Actinomycetota
TGG
Pro
>WENV183570564
OOCD01002787
235173
Actinomycetota
GGC
Ala
>WENV183570472
OOCD01001609
144660
Actinomycetota
TAC
Val
>WENV183570776
OOCD01009453
278447
Actinomycetota
GTG
His
>WENV183570766
OOCD01008816
411599
Actinomycetota
TTG
Gln
>WENV183570540
OOCD01002390
95593
Actinomycetota
>WENV183570530
OOCD01002230
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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