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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183596336
OODE01000120
235146
Actinomycetota
CGT
Thr
>WENV183596554
OODE01000787
235347
Actinomycetota
GGC
Ala
>WENV183596272
OODE01000051
166493
Actinomycetota
CTT
Lys
>WENV183596618
OODE01001208
235153
Actinomycetota
CCT
Arg
>WENV183596267
OODE01000049
144589
Actinomycetota
ACG
Arg
>WENV183596268
OODE01000049
144589
Actinomycetota
ACG
Arg
>WENV183596212
OODE01000012
37070
Actinomycetota
CGA
Ser
>WENV183596258
OODE01000042
235194
Actinomycetota
GTG
His
>WENV183596334
OODE01000120
273786
Actinomycetota
CGT
Thr
>WENV183596568
OODE01000909
158720
Actinomycetota
ACG
Arg
>WENV183596903
OODE01006510
245301
Actinomycetota
GCC
Gly
>WENV183596278
OODE01000060
411601
Actinomycetota
CCC
Gly
>WENV183596381
OODE01000197
144826
Actinomycetota
GGG
Pro
>WENV183596659
OODE01001518
23370
Actinomycetota
GCT
Ser
>WENV183596207
OODE01000009
338239
Actinomycetota
TTC
Glu
>WENV183596236
OODE01000028
162208
Actinomycetota
TAC
Val
>WENV183596249
OODE01000039
235174
Actinomycetota
TGC
Ala
>WENV183596191
OODE01000002
235101
Actinomycetota
TTT
Lys
>WENV183596245
OODE01000035
121510
Actinomycetota
TAA
Leu
>WENV183596505
OODE01000473
145423
Actinomycetota
TCT
Arg
>WENV183596951
OODE01009863
153948
Actinomycetota
GGG
Pro
>WENV183596202
OODE01000009
44855
Actinomycetota
TGA
Ser
>WENV183596333
OODE01000120
235199
Actinomycetota
CAC
Val
>WENV183596201
OODE01000009
44862
Actinomycetota
CGA
Ser
>WENV183596553
OODE01000787
413665
Actinomycetota
TTG
Gln
>WENV183596450
OODE01000336
254857
Actinomycetota
CCG
Arg
>WENV183596219
OODE01000013
254857
Actinomycetota
CCG
Arg
>WENV183596658
OODE01001518
144700
Actinomycetota
CAT
Met
>WENV183596213
OODE01000012
44942
Actinomycetota
TGA
Ser
>WENV183596913
OODE01006976
144636
Actinomycetota
GAT
Ile
>WENV183596259
OODE01000045
243671
Actinomycetota
CTC
Glu
>WENV183596328
OODE01000119
98279
Actinomycetota
GTA
Tyr
>WENV183596260
OODE01000045
338148
Actinomycetota
CTG
Gln
>WENV183596188
OODE01000002
338148
Actinomycetota
CTG
Gln
>WENV183596179
OODE01000001
235148
Actinomycetota
GTT
Asn
>WENV183596177
OODE01000001
235148
Actinomycetota
GTT
Asn
>WENV183596176
OODE01000001
235148
Actinomycetota
GTT
Asn
>WENV183596205
OODE01000009
144825
Actinomycetota
CAT
Met
>WENV183596174
OODE01000001
145347
Actinomycetota
CAA
Leu
>WENV183596206
OODE01000009
235348
Actinomycetota
CCT
Arg
>WENV183596326
OODE01000119
16467
Actinomycetota
GCT
Ser
>WENV183596252
OODE01000039
411554
Actinomycetota
CCC
Gly
>WENV183596335
OODE01000120
113601
Actinomycetota
TAG
Leu
>WENV183596190
OODE01000002
113601
Actinomycetota
TAG
Leu
>WENV183596368
OODE01000179
144595
Actinomycetota
CAA
Leu
>WENV183596185
OODE01000001
145343
Actinomycetota
GGG
Pro
>WENV183596237
OODE01000028
235149
Actinomycetota
CCT
Arg
>WENV183596366
OODE01000179
163764
Actinomycetota
TGG
Pro
>WENV183596216
OODE01000012
145269
Actinomycetota
CAT
Met
>WENV183596189
OODE01000002
235121
Actinomycetota
CGT
Thr
>WENV183596175
OODE01000001
144635
Actinomycetota
TGG
Pro
>WENV183596750
OODE01002865
61501
Actinomycetota
CAG
Leu
>WENV183596173
OODE01000001
119485
Actinomycetota
TAA
Leu
>WENV183596279
OODE01000060
80622
Actinomycetota
CAG
Leu
>WENV183596247
OODE01000039
80622
Actinomycetota
CAG
Leu
>WENV183596667
OODE01001617
16222
Actinomycetota
GAG
Leu
>WENV183596814
OODE01004004
158513
Actinomycetota
TGG
Pro
>WENV183596250
OODE01000039
235173
Actinomycetota
GGC
Ala
>WENV183596178
OODE01000001
235173
Actinomycetota
GGC
Ala
>WENV183596452
OODE01000337
144660
Actinomycetota
TAC
Val
>WENV183596404
OODE01000258
278447
Actinomycetota
GTG
His
>WENV183596261
OODE01000045
95593
Actinomycetota
>WENV183596257
OODE01000042
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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