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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182716010
OJPJ01000133
235113
Bacillota
GAA
Phe
>WENV182716073
OJPJ01000293
344183
Bacillota
CTG
Gln
>WENV182716090
OJPJ01000325
148239
Bacillota
TCT
Arg
>WENV182716091
OJPJ01000325
156937
Bacillota
GTG
His
>WENV182716199
OJPJ01001089
59312
Bacillota
CAG
Leu
>WENV182716201
OJPJ01001095
148188
Bacillota
CCG
Arg
>WENV182716224
OJPJ01001289
338128
Bacillota
TTC
Glu
>WENV182716225
OJPJ01001293
338147
Bacillota
CTC
Glu
>WENV182716242
OJPJ01001473
249522
Bacillota
TAC
Val
>WENV182716244
OJPJ01001473
235134
Bacillota
GAA
Phe
>WENV182716245
OJPJ01001473
240017
Bacillota
GCC
Gly
>WENV182716274
OJPJ01001819
238945
Bacillota
GCC
Gly
>WENV182716282
OJPJ01001919
235142
Bacillota
CTT
Lys
>WENV182716293
OJPJ01002181
235078
Bacillota
TAC
Val
>WENV182716298
OJPJ01002216
37071
Bacillota
TGA
Ser
>WENV182716328
OJPJ01002805
95563
Bacillota
GTA
Tyr
>WENV182716333
OJPJ01002909
235114
Bacillota
TTT
Lys
>WENV182716338
OJPJ01003007
37213
Bacillota
TGA
Ser
>WENV182716360
OJPJ01003398
152156
Bacillota
TGG
Pro
>WENV182716364
OJPJ01003497
413152
Bacillota
TCC
Gly
>WENV182716416
OJPJ01004777
148239
Bacillota
TCT
Arg
>WENV182716420
OJPJ01005067
144652
Bacillota
GTC
Asp
>WENV182716431
OJPJ01005548
235087
Bacillota
TGC
Ala
>WENV182716446
OJPJ01006434
44859
Bacillota
AAG
Leu
>WENV182716452
OJPJ01006802
235114
Bacillota
TTT
Lys
>WENV182716487
OJPJ01009059
235150
Bacillota
TGC
Ala
>WENV182716507
OJPJ01010654
235095
Bacillota
GGT
Thr
>WENV182716520
OJPJ01012193
37269
Bacillota
TGA
Ser
>WENV182716525
OJPJ01012379
411549
Bacillota
TTG
Gln
>WENV182716529
OJPJ01012788
238910
Bacillota
CTT
Lys
>WENV182716532
OJPJ01012886
24650
Bacillota
TAA
Leu
>WENV182716542
OJPJ01014592
58712
Bacillota
CAG
Leu
>WENV182716544
OJPJ01014854
80612
Bacillota
GTA
Tyr
>WENV182716547
OJPJ01015471
144621
Bacillota
GTT
Asn
>WENV182716563
OJPJ01017403
235127
Bacillota
TTT
Lys
>WENV182716565
OJPJ01017708
44854
Bacillota
TGA
Ser
>WENV182716566
OJPJ01017708
4624
Bacillota
GCT
Ser
>WENV182716573
OJPJ01018571
247734
Bacillota
TGC
Ala
>WENV182716585
OJPJ01019816
411547
Bacillota
CTG
Gln
>WENV182716586
OJPJ01019816
245298
Bacillota
CGG
Pro
>WENV182716592
OJPJ01020571
235294
Bacillota
TGC
Ala
>WENV182716614
OJPJ01022752
144583
Bacillota
ACG
Arg
>WENV182716622
OJPJ01024253
235137
Bacillota
TGC
Ala
>WENV182716624
OJPJ01024362
144594
Bacillota
CAC
Val
>WENV182716636
OJPJ01025452
147691
Bacillota
GAT
Ile
>WENV182716648
OJPJ01029774
338152
Bacillota
TTC
Glu
>WENV182716654
OJPJ01030910
238910
Bacillota
CTT
Lys
>WENV182716661
OJPJ01032556
144612
Bacillota
TCT
Arg
>WENV182716668
OJPJ01034967
11034
Bacillota
GGA
Ser
>WENV182716682
OJPJ01037503
338440
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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