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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
137 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183530945
OOAC01000012
24650
Bacillota
TAA
Leu
>WENV183531983
OOAC01018329
155958
Bacillota
GAT
Ile
>WENV183531262
OOAC01000433
144612
Bacillota
TCT
Arg
>WENV183531686
OOAC01003181
154063
Bacillota
CGG
Pro
>WENV183531266
OOAC01000444
339890
Bacillota
TTG
Gln
>WENV183531308
OOAC01000599
235098
Bacillota
GAC
Val
>WENV183531560
OOAC01001884
235098
Bacillota
GAC
Val
>WENV183531655
OOAC01002944
235098
Bacillota
GAC
Val
>WENV183531030
OOAC01000058
338152
Bacillota
TTC
Glu
>WENV183531974
OOAC01017797
340263
Bacillota
TTC
Glu
>WENV183531603
OOAC01002239
148239
Bacillota
TCT
Arg
>WENV183531863
OOAC01008479
44854
Bacillota
TGA
Ser
>WENV183531820
OOAC01007110
44854
Bacillota
TGA
Ser
>WENV183531729
OOAC01004495
44854
Bacillota
TGA
Ser
>WENV183531474
OOAC01001281
44854
Bacillota
TGA
Ser
>WENV183531379
OOAC01000889
44854
Bacillota
TGA
Ser
>WENV183531343
OOAC01000719
44854
Bacillota
TGA
Ser
>WENV183531029
OOAC01000058
235154
Bacillota
GTT
Asn
>WENV183531976
OOAC01017797
148348
Bacillota
GTC
Asp
>WENV183531072
OOAC01000087
37071
Bacillota
TGA
Ser
>WENV183531496
OOAC01001428
59312
Bacillota
CAG
Leu
>WENV183531382
OOAC01000891
59312
Bacillota
CAG
Leu
>WENV183531059
OOAC01000079
59312
Bacillota
CAG
Leu
>WENV183531586
OOAC01002125
338147
Bacillota
CTC
Glu
>WENV183531328
OOAC01000688
338147
Bacillota
CTC
Glu
>WENV183531094
OOAC01000110
338147
Bacillota
CTC
Glu
>WENV183532099
OOAC01039520
235150
Bacillota
TGC
Ala
>WENV183531074
OOAC01000087
235114
Bacillota
TTT
Lys
>WENV183531058
OOAC01000079
44859
Bacillota
AAG
Leu
>WENV183531057
OOAC01000079
44859
Bacillota
AAG
Leu
>WENV183531762
OOAC01005302
11034
Bacillota
GGA
Ser
>WENV183531745
OOAC01004941
11034
Bacillota
GGA
Ser
>WENV183531353
OOAC01000751
11034
Bacillota
GGA
Ser
>WENV183531977
OOAC01017797
239076
Bacillota
GAA
Phe
>WENV183531604
OOAC01002239
156937
Bacillota
GTG
His
>WENV183532042
OOAC01028649
340265
Bacillota
GCC
Gly
>WENV183531295
OOAC01000560
16266
Bacillota
GCT
Ser
>WENV183531779
OOAC01005812
338149
Bacillota
CTC
Glu
>WENV183531773
OOAC01005556
338149
Bacillota
CTC
Glu
>WENV183531754
OOAC01005024
338149
Bacillota
CTC
Glu
>WENV183531674
OOAC01003123
338149
Bacillota
CTC
Glu
>WENV183531483
OOAC01001357
338149
Bacillota
CTC
Glu
>WENV183531592
OOAC01002172
245298
Bacillota
CGG
Pro
>WENV183531510
OOAC01001541
245298
Bacillota
CGG
Pro
>WENV183532040
OOAC01027754
37269
Bacillota
TGA
Ser
>WENV183531618
OOAC01002414
144599
Bacillota
GTC
Asp
>WENV183532077
OOAC01034657
153911
Bacillota
GAT
Ile
>WENV183532020
OOAC01023110
153911
Bacillota
GAT
Ile
>WENV183532001
OOAC01020167
411547
Bacillota
CTG
Gln
>WENV183531818
OOAC01007094
411547
Bacillota
CTG
Gln
>WENV183531725
OOAC01004233
411547
Bacillota
CTG
Gln
>WENV183531591
OOAC01002172
411547
Bacillota
CTG
Gln
>WENV183531509
OOAC01001541
411547
Bacillota
CTG
Gln
>WENV183531269
OOAC01000447
411547
Bacillota
CTG
Gln
>WENV183531252
OOAC01000398
411547
Bacillota
CTG
Gln
>WENV183531181
OOAC01000225
411547
Bacillota
CTG
Gln
>WENV183531649
OOAC01002846
147684
Bacillota
ACG
Arg
>WENV183531864
OOAC01008479
4624
Bacillota
GCT
Ser
>WENV183531821
OOAC01007110
4624
Bacillota
GCT
Ser
>WENV183531730
OOAC01004495
4624
Bacillota
GCT
Ser
>WENV183531475
OOAC01001281
4624
Bacillota
GCT
Ser
>WENV183531380
OOAC01000889
4624
Bacillota
GCT
Ser
>WENV183531344
OOAC01000719
4624
Bacillota
GCT
Ser
>WENV183531038
OOAC01000066
263765
Bacillota
TAC
Val
>WENV183531844
OOAC01007711
254697
Bacillota
TTT
Lys
>WENV183531805
OOAC01006687
235095
Bacillota
GGT
Thr
>WENV183531698
OOAC01003378
235095
Bacillota
GGT
Thr
>WENV183531508
OOAC01001535
235095
Bacillota
GGT
Thr
>WENV183531507
OOAC01001535
235095
Bacillota
GGT
Thr
>WENV183531279
OOAC01000485
419945
Bacillota
GCA
Cys
>WENV183531975
OOAC01017797
239079
Bacillota
TAC
Val
>WENV183531753
OOAC01005006
411549
Bacillota
TTG
Gln
>WENV183531593
OOAC01002172
411549
Bacillota
TTG
Gln
>WENV183531521
OOAC01001657
411549
Bacillota
TTG
Gln
>WENV183531454
OOAC01001162
411549
Bacillota
TTG
Gln
>WENV183531198
OOAC01000263
235142
Bacillota
CTT
Lys
>WENV183531909
OOAC01011912
148188
Bacillota
CCG
Arg
>WENV183531806
OOAC01006771
148188
Bacillota
CCG
Arg
>WENV183531763
OOAC01005309
148188
Bacillota
CCG
Arg
>WENV183531744
OOAC01004874
148188
Bacillota
CCG
Arg
>WENV183531728
OOAC01004473
148188
Bacillota
CCG
Arg
>WENV183531519
OOAC01001647
148188
Bacillota
CCG
Arg
>WENV183531794
OOAC01006356
80612
Bacillota
GTA
Tyr
>WENV183531516
OOAC01001609
80612
Bacillota
GTA
Tyr
>WENV183531590
OOAC01002159
256380
Bacillota
>WENV183531882
OOAC01009733
235124
Bacillota
TGG
Pro
>WENV183531788
OOAC01006097
235124
Bacillota
TGG
Pro
>WENV183531501
OOAC01001502
235124
Bacillota
TGG
Pro
>WENV183531316
OOAC01000621
235124
Bacillota
TGG
Pro
>WENV183531300
OOAC01000574
235124
Bacillota
TGG
Pro
>WENV183531619
OOAC01002414
254433
Bacillota
TAC
Val
>WENV183531718
OOAC01003921
338129
Bacillota
TGT
Thr
>WENV183531526
OOAC01001700
338129
Bacillota
TGT
Thr
>WENV183531965
OOAC01017230
157838
Bacillota
GTC
Asp
>WENV183531594
OOAC01002188
144583
Bacillota
ACG
Arg
>WENV183531461
OOAC01001198
144583
Bacillota
ACG
Arg
>WENV183531456
OOAC01001167
247734
Bacillota
TGC
Ala
>WENV183531488
OOAC01001381
419877
Bacillota
TCC
Gly
>WENV183531823
OOAC01007131
235171
Bacillota
CCA
Trp
>WENV183531640
OOAC01002697
235171
Bacillota
CCA
Trp
>WENV183531505
OOAC01001535
235171
Bacillota
CCA
Trp
>WENV183531749
OOAC01004973
238974
Bacillota
GAA
Phe
>WENV183531392
OOAC01000921
238974
Bacillota
GAA
Phe
>WENV183531780
OOAC01005812
144621
Bacillota
GTT
Asn
>WENV183531774
OOAC01005556
144621
Bacillota
GTT
Asn
>WENV183531755
OOAC01005024
144621
Bacillota
GTT
Asn
>WENV183531675
OOAC01003123
144621
Bacillota
GTT
Asn
>WENV183531561
OOAC01001890
144621
Bacillota
GTT
Asn
>WENV183531484
OOAC01001357
144621
Bacillota
GTT
Asn
>WENV183531340
OOAC01000711
144621
Bacillota
GTT
Asn
>WENV183531323
OOAC01000664
144621
Bacillota
GTT
Asn
>WENV183531073
OOAC01000087
235113
Bacillota
GAA
Phe
>WENV183531836
OOAC01007624
243098
Bacillota
GGT
Thr
>WENV183531693
OOAC01003333
58712
Bacillota
CAG
Leu
>WENV183531608
OOAC01002266
58712
Bacillota
CAG
Leu
>WENV183531470
OOAC01001242
58712
Bacillota
CAG
Leu
>WENV183531394
OOAC01000925
58712
Bacillota
CAG
Leu
>WENV183531766
OOAC01005369
245296
Bacillota
CCC
Gly
>WENV183531748
OOAC01004955
245296
Bacillota
CCC
Gly
>WENV183531520
OOAC01001654
245296
Bacillota
CCC
Gly
>WENV183531973
OOAC01017797
239078
Bacillota
TTT
Lys
>WENV183531688
OOAC01003225
344240
Bacillota
GCC
Gly
>WENV183531999
OOAC01019991
261708
Bacillota
CCA
Trp
>WENV183532182
OOAC01063004
242686
Bacillota
TGC
Ala
>WENV183531776
OOAC01005732
144594
Bacillota
CAC
Val
>WENV183531637
OOAC01002680
144594
Bacillota
CAC
Val
>WENV183531543
OOAC01001822
144594
Bacillota
CAC
Val
>WENV183531140
OOAC01000177
95563
Bacillota
GTA
Tyr
>WENV183531132
OOAC01000165
338127
Bacillota
TTG
Gln
>WENV183531838
OOAC01007691
414486
Bacillota
CCC
Gly
>WENV183531399
OOAC01000968
114075
Bacillota
TAG
Leu
>WENV183531374
OOAC01000872
238945
Bacillota
GCC
Gly
>WENV183531706
OOAC01003492
338128
Bacillota
TTC
Glu
>WENV183531573
OOAC01001978
338128
Bacillota
TTC
Glu
>WENV183531504
OOAC01001522
338128
Bacillota
TTC
Glu
>WENV183531106
OOAC01000130
338128
Bacillota
TTC
Glu
>WENV183531704
OOAC01003483
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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