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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
88 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183534384
OOAF01000001
235134
Bacillota
GAA
Phe
>WENV183534385
OOAF01000001
240017
Bacillota
GCC
Gly
>WENV183534440
OOAF01000021
235142
Bacillota
CTT
Lys
>WENV183534467
OOAF01000033
344240
Bacillota
GCC
Gly
>WENV183534493
OOAF01000055
338147
Bacillota
CTC
Glu
>WENV183534494
OOAF01000056
338147
Bacillota
CTC
Glu
>WENV183534555
OOAF01000129
245298
Bacillota
CGG
Pro
>WENV183534554
OOAF01000129
411547
Bacillota
CTG
Gln
>WENV183534565
OOAF01000149
245370
Bacillota
TGT
Thr
>WENV183534568
OOAF01000149
243098
Bacillota
GGT
Thr
>WENV183534579
OOAF01000164
338147
Bacillota
CTC
Glu
>WENV183534578
OOAF01000164
338147
Bacillota
CTC
Glu
>WENV183534592
OOAF01000183
238945
Bacillota
GCC
Gly
>WENV183534632
OOAF01000219
147684
Bacillota
ACG
Arg
>WENV183534664
OOAF01000276
411547
Bacillota
CTG
Gln
>WENV183534668
OOAF01000282
59312
Bacillota
CAG
Leu
>WENV183534676
OOAF01000297
338128
Bacillota
TTC
Glu
>WENV183534682
OOAF01000304
235114
Bacillota
TTT
Lys
>WENV183534681
OOAF01000304
235113
Bacillota
GAA
Phe
>WENV183534707
OOAF01000338
59312
Bacillota
CAG
Leu
>WENV183534706
OOAF01000338
44859
Bacillota
AAG
Leu
>WENV183534705
OOAF01000338
44859
Bacillota
AAG
Leu
>WENV183534710
OOAF01000346
235142
Bacillota
CTT
Lys
>WENV183534760
OOAF01000473
11034
Bacillota
GGA
Ser
>WENV183534768
OOAF01000490
235079
Bacillota
GAA
Phe
>WENV183534771
OOAF01000490
144621
Bacillota
GTT
Asn
>WENV183534769
OOAF01000490
249259
Bacillota
GCC
Gly
>WENV183534774
OOAF01000501
95563
Bacillota
GTA
Tyr
>WENV183534802
OOAF01000564
58712
Bacillota
CAG
Leu
>WENV183534817
OOAF01000614
413152
Bacillota
TCC
Gly
>WENV183534824
OOAF01000622
414486
Bacillota
CCC
Gly
>WENV183534830
OOAF01000635
58712
Bacillota
CAG
Leu
>WENV183534836
OOAF01000664
235098
Bacillota
GAC
Val
>WENV183534876
OOAF01000791
152492
Bacillota
GGG
Pro
>WENV183534877
OOAF01000799
238945
Bacillota
GCC
Gly
>WENV183534885
OOAF01000828
144612
Bacillota
TCT
Arg
>WENV183534890
OOAF01000846
411547
Bacillota
CTG
Gln
>WENV183534905
OOAF01000911
338147
Bacillota
CTC
Glu
>WENV183534910
OOAF01000951
235124
Bacillota
TGG
Pro
>WENV183534941
OOAF01001087
411549
Bacillota
TTG
Gln
>WENV183534951
OOAF01001128
235124
Bacillota
TGG
Pro
>WENV183534987
OOAF01001336
58712
Bacillota
CAG
Leu
>WENV183534988
OOAF01001340
58712
Bacillota
CAG
Leu
>WENV183534991
OOAF01001347
245344
Bacillota
GAA
Phe
>WENV183534999
OOAF01001413
11034
Bacillota
GGA
Ser
>WENV183535005
OOAF01001460
144612
Bacillota
TCT
Arg
>WENV183535056
OOAF01001766
245298
Bacillota
CGG
Pro
>WENV183535055
OOAF01001766
411547
Bacillota
CTG
Gln
>WENV183535067
OOAF01001838
338128
Bacillota
TTC
Glu
>WENV183535076
OOAF01001922
235098
Bacillota
GAC
Val
>WENV183535092
OOAF01002116
245296
Bacillota
CCC
Gly
>WENV183535111
OOAF01002395
235098
Bacillota
GAC
Val
>WENV183535109
OOAF01002395
44854
Bacillota
TGA
Ser
>WENV183535110
OOAF01002395
4624
Bacillota
GCT
Ser
>WENV183535112
OOAF01002402
144583
Bacillota
ACG
Arg
>WENV183535113
OOAF01002429
338152
Bacillota
TTC
Glu
>WENV183535115
OOAF01002433
411547
Bacillota
CTG
Gln
>WENV183535116
OOAF01002467
148188
Bacillota
CCG
Arg
>WENV183535130
OOAF01002657
144621
Bacillota
GTT
Asn
>WENV183535133
OOAF01002717
44854
Bacillota
TGA
Ser
>WENV183535134
OOAF01002717
4624
Bacillota
GCT
Ser
>WENV183535141
OOAF01002848
37213
Bacillota
TGA
Ser
>WENV183535168
OOAF01003367
235095
Bacillota
GGT
Thr
>WENV183535171
OOAF01003483
37071
Bacillota
TGA
Ser
>WENV183535172
OOAF01003504
411549
Bacillota
TTG
Gln
>WENV183535174
OOAF01003545
235171
Bacillota
CCA
Trp
>WENV183535175
OOAF01003552
338129
Bacillota
TGT
Thr
>WENV183535183
OOAF01003783
144594
Bacillota
CAC
Val
>WENV183535190
OOAF01004043
238945
Bacillota
GCC
Gly
>WENV183535206
OOAF01004355
148188
Bacillota
CCG
Arg
>WENV183535216
OOAF01004620
144612
Bacillota
TCT
Arg
>WENV183535219
OOAF01004650
80612
Bacillota
GTA
Tyr
>WENV183535234
OOAF01005054
249259
Bacillota
GCC
Gly
>WENV183535255
OOAF01005707
114075
Bacillota
TAG
Leu
>WENV183535297
OOAF01007528
341763
Bacillota
CTC
Glu
>WENV183535298
OOAF01007586
235294
Bacillota
TGC
Ala
>WENV183535308
OOAF01008093
235294
Bacillota
TGC
Ala
>WENV183535314
OOAF01008379
144668
Bacillota
GTC
Asp
>WENV183535319
OOAF01008546
153911
Bacillota
GAT
Ile
>WENV183535329
OOAF01009053
154063
Bacillota
CGG
Pro
>WENV183535336
OOAF01009311
144610
Bacillota
GTG
His
>WENV183535345
OOAF01009500
235150
Bacillota
TGC
Ala
>WENV183535385
OOAF01013732
247734
Bacillota
TGC
Ala
>WENV183535443
OOAF01023120
412387
Bacillota
GCA
Cys
>WENV183535463
OOAF01026534
153911
Bacillota
GAT
Ile
>WENV183535466
OOAF01026957
246023
Bacillota
TGC
Ala
>WENV183535482
OOAF01031236
144612
Bacillota
TCT
Arg
>WENV183535512
OOAF01038905
59296
Bacillota
AAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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