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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183548783
OOAY01001528
152051
Bacillota
ACG
Arg
>WENV183548924
OOAY01006497
59664
Bacillota
CAG
Leu
>WENV183548909
OOAY01005038
155089
Bacillota
CAT
Met
>WENV183548515
OOAY01000034
169968
Bacillota
CAT
Met
>WENV183548564
OOAY01000099
162445
Bacillota
CAT
Met
>WENV183548562
OOAY01000099
162445
Bacillota
CAT
Met
>WENV183548800
OOAY01001701
429429
Bacillota
CCA
Trp
>WENV183548782
OOAY01001528
243399
Bacillota
CCA
Trp
>WENV183548970
OOAY01018570
245386
Bacillota
CCA
Trp
>WENV183548757
OOAY01001283
414486
Bacillota
CCC
Gly
>WENV183548516
OOAY01000034
313454
Bacillota
GAA
Phe
>WENV183548510
OOAY01000032
313454
Bacillota
GAA
Phe
>WENV183548954
OOAY01014262
429443
Bacillota
GCA
Cys
>WENV183548879
OOAY01003334
419945
Bacillota
GCA
Cys
>WENV183548852
OOAY01002376
240017
Bacillota
GCC
Gly
>WENV183548878
OOAY01003334
384950
Bacillota
GCC
Gly
>WENV183548927
OOAY01006962
18852
Bacillota
GCT
Ser
>WENV183548573
OOAY01000115
152492
Bacillota
GGG
Pro
>WENV183548872
OOAY01002936
100326
Bacillota
GTA
Tyr
>WENV183548966
OOAY01017107
127105
Bacillota
GTG
His
>WENV183548634
OOAY01000249
144610
Bacillota
GTG
His
>WENV183548605
OOAY01000176
287000
Bacillota
GTT
Asn
>WENV183548603
OOAY01000176
287000
Bacillota
GTT
Asn
>WENV183548880
OOAY01003334
37549
Bacillota
TAA
Leu
>WENV183548644
OOAY01000267
41154
Bacillota
TAA
Leu
>WENV183548868
OOAY01002720
114075
Bacillota
TAG
Leu
>WENV183548633
OOAY01000249
157635
Bacillota
TCT
Arg
>WENV183548640
OOAY01000258
37269
Bacillota
TGA
Ser
>WENV183548807
OOAY01001837
247734
Bacillota
TGC
Ala
>WENV183548604
OOAY01000176
338152
Bacillota
TTC
Glu
>WENV183548635
OOAY01000249
340802
Bacillota
TTG
Gln
>WENV183548900
OOAY01004449
339803
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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