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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
77 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183556617
OOBO01002623
196621
Bacillota
GTC
Asp
>WENV183556631
OOBO01002921
144612
Bacillota
TCT
Arg
>WENV183556663
OOBO01004026
267649
Bacillota
TAC
Val
>WENV183556791
OOBO01010570
235134
Bacillota
GAA
Phe
>WENV183556516
OOBO01001456
267556
Bacillota
TAC
Val
>WENV183556449
OOBO01000941
235098
Bacillota
GAC
Val
>WENV183556536
OOBO01001620
235098
Bacillota
GAC
Val
>WENV183556697
OOBO01005468
235098
Bacillota
GAC
Val
>WENV183556747
OOBO01007144
235098
Bacillota
GAC
Val
>WENV183556854
OOBO01015360
235098
Bacillota
GAC
Val
>WENV183556872
OOBO01018319
338152
Bacillota
TTC
Glu
>WENV183556488
OOBO01001252
148239
Bacillota
TCT
Arg
>WENV183556677
OOBO01004577
44854
Bacillota
TGA
Ser
>WENV183556548
OOBO01001790
44854
Bacillota
TGA
Ser
>WENV183556482
OOBO01001205
44854
Bacillota
TGA
Ser
>WENV183556807
OOBO01011181
144577
Bacillota
GAT
Ile
>WENV183556924
OOBO01026414
246023
Bacillota
TGC
Ala
>WENV183556905
OOBO01022235
235150
Bacillota
TGC
Ala
>WENV183556708
OOBO01005756
155273
Bacillota
CAT
Met
>WENV183556840
OOBO01014327
235137
Bacillota
TGC
Ala
>WENV183556835
OOBO01013556
341763
Bacillota
CTC
Glu
>WENV183556761
OOBO01008278
429429
Bacillota
CCA
Trp
>WENV183556750
OOBO01007572
44859
Bacillota
AAG
Leu
>WENV183556507
OOBO01001370
11034
Bacillota
GGA
Ser
>WENV183556441
OOBO01000873
11034
Bacillota
GGA
Ser
>WENV183556737
OOBO01006585
274189
Bacillota
TGT
Thr
>WENV183556705
OOBO01005728
37437
Bacillota
TAA
Leu
>WENV183556442
OOBO01000876
235079
Bacillota
GAA
Phe
>WENV183556866
OOBO01017917
16266
Bacillota
GCT
Ser
>WENV183556806
OOBO01011181
235087
Bacillota
TGC
Ala
>WENV183556707
OOBO01005728
81382
Bacillota
GAG
Leu
>WENV183556669
OOBO01004097
245298
Bacillota
CGG
Pro
>WENV183556457
OOBO01001036
245298
Bacillota
CGG
Pro
>WENV183556451
OOBO01000984
37269
Bacillota
TGA
Ser
>WENV183556871
OOBO01018319
287000
Bacillota
GTT
Asn
>WENV183556735
OOBO01006508
173810
Bacillota
CAT
Met
>WENV183556489
OOBO01001252
144610
Bacillota
GTG
His
>WENV183556792
OOBO01010570
240017
Bacillota
GCC
Gly
>WENV183556668
OOBO01004097
411547
Bacillota
CTG
Gln
>WENV183556456
OOBO01001036
411547
Bacillota
CTG
Gln
>WENV183556450
OOBO01000961
411547
Bacillota
CTG
Gln
>WENV183556440
OOBO01000862
411547
Bacillota
CTG
Gln
>WENV183556952
OOBO01040400
147684
Bacillota
ACG
Arg
>WENV183556678
OOBO01004577
4624
Bacillota
GCT
Ser
>WENV183556549
OOBO01001790
4624
Bacillota
GCT
Ser
>WENV183556483
OOBO01001205
4624
Bacillota
GCT
Ser
>WENV183556618
OOBO01002623
235095
Bacillota
GGT
Thr
>WENV183556615
OOBO01002623
235095
Bacillota
GGT
Thr
>WENV183556826
OOBO01012918
96694
Bacillota
TAG
Leu
>WENV183556653
OOBO01003541
239079
Bacillota
TAC
Val
>WENV183556703
OOBO01005719
411549
Bacillota
TTG
Gln
>WENV183556857
OOBO01016127
235142
Bacillota
CTT
Lys
>WENV183556418
OOBO01000708
245386
Bacillota
CCA
Trp
>WENV183556566
OOBO01001925
148188
Bacillota
CCG
Arg
>WENV183556508
OOBO01001381
148188
Bacillota
CCG
Arg
>WENV183556559
OOBO01001831
80612
Bacillota
GTA
Tyr
>WENV183556344
OOBO01000384
80612
Bacillota
GTA
Tyr
>WENV183556687
OOBO01005070
235124
Bacillota
TGG
Pro
>WENV183556652
OOBO01003541
241526
Bacillota
CTT
Lys
>WENV183556458
OOBO01001038
338129
Bacillota
TGT
Thr
>WENV183556447
OOBO01000935
157838
Bacillota
GTC
Asp
>WENV183556569
OOBO01001968
144583
Bacillota
ACG
Arg
>WENV183556921
OOBO01026413
247734
Bacillota
TGC
Ala
>WENV183556802
OOBO01010899
127572
Bacillota
ACG
Arg
>WENV183556616
OOBO01002623
235171
Bacillota
CCA
Trp
>WENV183556787
OOBO01010483
238974
Bacillota
GAA
Phe
>WENV183556867
OOBO01017949
144621
Bacillota
GTT
Asn
>WENV183556605
OOBO01002510
58712
Bacillota
CAG
Leu
>WENV183556912
OOBO01024429
245296
Bacillota
CCC
Gly
>WENV183556740
OOBO01006698
344240
Bacillota
GCC
Gly
>WENV183556473
OOBO01001161
144594
Bacillota
CAC
Val
>WENV183556676
OOBO01004488
95563
Bacillota
GTA
Tyr
>WENV183556745
OOBO01007129
414486
Bacillota
CCC
Gly
>WENV183556672
OOBO01004278
272488
Bacillota
GAA
Phe
>WENV183556706
OOBO01005728
81598
Bacillota
CAG
Leu
>WENV183556540
OOBO01001642
338128
Bacillota
TTC
Glu
>WENV183556524
OOBO01001539
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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