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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
84 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183563861
OOBY01000037
338147
Bacillota
CTC
Glu
>WENV183563860
OOBY01000037
338147
Bacillota
CTC
Glu
>WENV183563859
OOBY01000037
338147
Bacillota
CTC
Glu
>WENV183563945
OOBY01000093
59312
Bacillota
CAG
Leu
>WENV183563948
OOBY01000096
411547
Bacillota
CTG
Gln
>WENV183563963
OOBY01000111
307003
Bacillota
TGC
Ala
>WENV183563971
OOBY01000120
202812
Bacillota
CAT
Met
>WENV183564001
OOBY01000160
100326
Bacillota
GTA
Tyr
>WENV183564004
OOBY01000161
267649
Bacillota
TAC
Val
>WENV183564067
OOBY01000234
272992
Bacillota
CTT
Lys
>WENV183564070
OOBY01000238
37269
Bacillota
TGA
Ser
>WENV183564081
OOBY01000270
144621
Bacillota
GTT
Asn
>WENV183564099
OOBY01000311
144610
Bacillota
GTG
His
>WENV183564105
OOBY01000332
429429
Bacillota
CCA
Trp
>WENV183564115
OOBY01000371
157838
Bacillota
GTC
Asp
>WENV183564116
OOBY01000371
295033
Bacillota
GAA
Phe
>WENV183564117
OOBY01000371
248965
Bacillota
GCC
Gly
>WENV183564122
OOBY01000393
304022
Bacillota
GCC
Gly
>WENV183564121
OOBY01000393
235079
Bacillota
GAA
Phe
>WENV183564126
OOBY01000396
267649
Bacillota
TAC
Val
>WENV183564130
OOBY01000401
100326
Bacillota
GTA
Tyr
>WENV183564132
OOBY01000405
147684
Bacillota
ACG
Arg
>WENV183564134
OOBY01000415
44854
Bacillota
TGA
Ser
>WENV183564135
OOBY01000415
4624
Bacillota
GCT
Ser
>WENV183564145
OOBY01000463
144594
Bacillota
CAC
Val
>WENV183564152
OOBY01000475
293599
Bacillota
CTT
Lys
>WENV183564171
OOBY01000543
173810
Bacillota
CAT
Met
>WENV183564188
OOBY01000627
152492
Bacillota
GGG
Pro
>WENV183564190
OOBY01000631
338128
Bacillota
TTC
Glu
>WENV183564208
OOBY01000777
313454
Bacillota
GAA
Phe
>WENV183564222
OOBY01000854
245298
Bacillota
CGG
Pro
>WENV183564221
OOBY01000854
411547
Bacillota
CTG
Gln
>WENV183564223
OOBY01000863
235095
Bacillota
GGT
Thr
>WENV183564242
OOBY01000985
11034
Bacillota
GGA
Ser
>WENV183564252
OOBY01001058
248965
Bacillota
GCC
Gly
>WENV183564254
OOBY01001078
411549
Bacillota
TTG
Gln
>WENV183564257
OOBY01001128
235124
Bacillota
TGG
Pro
>WENV183564259
OOBY01001150
411549
Bacillota
TTG
Gln
>WENV183564282
OOBY01001408
157838
Bacillota
GTC
Asp
>WENV183564288
OOBY01001435
340802
Bacillota
TTG
Gln
>WENV183564287
OOBY01001435
156937
Bacillota
GTG
His
>WENV183564286
OOBY01001435
152151
Bacillota
TCT
Arg
>WENV183564291
OOBY01001447
144583
Bacillota
ACG
Arg
>WENV183564294
OOBY01001460
148239
Bacillota
TCT
Arg
>WENV183564296
OOBY01001524
144594
Bacillota
CAC
Val
>WENV183564305
OOBY01001893
235098
Bacillota
GAC
Val
>WENV183564309
OOBY01002075
338149
Bacillota
CTC
Glu
>WENV183564310
OOBY01002075
144621
Bacillota
GTT
Asn
>WENV183564312
OOBY01002086
338128
Bacillota
TTC
Glu
>WENV183564313
OOBY01002120
263765
Bacillota
TAC
Val
>WENV183564323
OOBY01002402
298620
Bacillota
CAT
Met
>WENV183564324
OOBY01002441
58712
Bacillota
CAG
Leu
>WENV183564326
OOBY01002495
235098
Bacillota
GAC
Val
>WENV183564329
OOBY01002647
148188
Bacillota
CCG
Arg
>WENV183564330
OOBY01002687
235124
Bacillota
TGG
Pro
>WENV183564331
OOBY01002693
299139
Bacillota
TGC
Ala
>WENV183564348
OOBY01003635
235098
Bacillota
GAC
Val
>WENV183564349
OOBY01003655
338149
Bacillota
CTC
Glu
>WENV183564350
OOBY01003655
144621
Bacillota
GTT
Asn
>WENV183564360
OOBY01004330
148188
Bacillota
CCG
Arg
>WENV183564376
OOBY01005361
235098
Bacillota
GAC
Val
>WENV183564402
OOBY01007755
411547
Bacillota
CTG
Gln
>WENV183564406
OOBY01008442
202812
Bacillota
CAT
Met
>WENV183564416
OOBY01009707
246023
Bacillota
TGC
Ala
>WENV183564415
OOBY01009707
201704
Bacillota
GAT
Ile
>WENV183564428
OOBY01010973
341763
Bacillota
CTC
Glu
>WENV183564441
OOBY01013598
304022
Bacillota
GCC
Gly
>WENV183564450
OOBY01016118
198770
Bacillota
GTC
Asp
>WENV183564452
OOBY01016118
241432
Bacillota
TGT
Thr
>WENV183564453
OOBY01016121
245296
Bacillota
CCC
Gly
>WENV183564472
OOBY01017761
413152
Bacillota
TCC
Gly
>WENV183564505
OOBY01025668
235287
Bacillota
TTT
Lys
>WENV183564504
OOBY01025668
235290
Bacillota
TTG
Gln
>WENV183564508
OOBY01025668
144766
Bacillota
CAT
Met
>WENV183564503
OOBY01025668
144762
Bacillota
TCT
Arg
>WENV183564520
OOBY01028027
144652
Bacillota
GTC
Asp
>WENV183564527
OOBY01028602
338152
Bacillota
TTC
Glu
>WENV183564526
OOBY01028602
287000
Bacillota
GTT
Asn
>WENV183564534
OOBY01032099
414486
Bacillota
CCC
Gly
>WENV183564539
OOBY01035241
267556
Bacillota
TAC
Val
>WENV183564538
OOBY01035241
144668
Bacillota
GTC
Asp
>WENV183564543
OOBY01035911
196621
Bacillota
GTC
Asp
>WENV183564542
OOBY01035911
235117
Bacillota
TAC
Val
>WENV183564544
OOBY01035911
235079
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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