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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
75 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183572278
OOCF01002877
196621
Bacillota
GTC
Asp
>WENV183572369
OOCF01006104
196621
Bacillota
GTC
Asp
>WENV183572401
OOCF01007005
196621
Bacillota
GTC
Asp
>WENV183572443
OOCF01008769
196621
Bacillota
GTC
Asp
>WENV183572616
OOCF01040702
196621
Bacillota
GTC
Asp
>WENV183572142
OOCF01001109
309417
Bacillota
GGC
Ala
>WENV183572231
OOCF01002195
267649
Bacillota
TAC
Val
>WENV183572592
OOCF01034591
267649
Bacillota
TAC
Val
>WENV183571953
OOCF01000195
235134
Bacillota
GAA
Phe
>WENV183572251
OOCF01002490
235098
Bacillota
GAC
Val
>WENV183572286
OOCF01003076
340263
Bacillota
TTC
Glu
>WENV183572336
OOCF01004660
148239
Bacillota
TCT
Arg
>WENV183572539
OOCF01020107
44854
Bacillota
TGA
Ser
>WENV183572288
OOCF01003076
148348
Bacillota
GTC
Asp
>WENV183572549
OOCF01021742
144577
Bacillota
GAT
Ile
>WENV183572370
OOCF01006104
304022
Bacillota
GCC
Gly
>WENV183572276
OOCF01002877
304022
Bacillota
GCC
Gly
>WENV183572148
OOCF01001215
239080
Bacillota
CTG
Gln
>WENV183572418
OOCF01007712
238910
Bacillota
CTT
Lys
>WENV183572498
OOCF01013360
235150
Bacillota
TGC
Ala
>WENV183572560
OOCF01024965
429429
Bacillota
CCA
Trp
>WENV183572505
OOCF01014192
41154
Bacillota
TAA
Leu
>WENV183572313
OOCF01003644
11034
Bacillota
GGA
Ser
>WENV183572277
OOCF01002877
235117
Bacillota
TAC
Val
>WENV183572289
OOCF01003076
239076
Bacillota
GAA
Phe
>WENV183572030
OOCF01000440
156937
Bacillota
GTG
His
>WENV183572310
OOCF01003571
235079
Bacillota
GAA
Phe
>WENV183572279
OOCF01002877
235079
Bacillota
GAA
Phe
>WENV183572070
OOCF01000615
235079
Bacillota
GAA
Phe
>WENV183572233
OOCF01002196
340265
Bacillota
GCC
Gly
>WENV183572160
OOCF01001305
340265
Bacillota
GCC
Gly
>WENV183572548
OOCF01021742
235087
Bacillota
TGC
Ala
>WENV183572485
OOCF01012172
173314
Bacillota
GAT
Ile
>WENV183572514
OOCF01015277
338149
Bacillota
CTC
Glu
>WENV183572487
OOCF01012319
338149
Bacillota
CTC
Glu
>WENV183572479
OOCF01011669
338149
Bacillota
CTC
Glu
>WENV183572071
OOCF01000615
271471
Bacillota
GCC
Gly
>WENV183572028
OOCF01000438
271471
Bacillota
GCC
Gly
>WENV183572013
OOCF01000388
245298
Bacillota
CGG
Pro
>WENV183571810
OOCF01000007
152149
Bacillota
GTG
His
>WENV183572194
OOCF01001528
240017
Bacillota
GCC
Gly
>WENV183571954
OOCF01000195
240017
Bacillota
GCC
Gly
>WENV183571846
OOCF01000022
240017
Bacillota
GCC
Gly
>WENV183572012
OOCF01000388
411547
Bacillota
CTG
Gln
>WENV183572540
OOCF01020107
4624
Bacillota
GCT
Ser
>WENV183571951
OOCF01000195
263765
Bacillota
TAC
Val
>WENV183571880
OOCF01000065
263765
Bacillota
TAC
Val
>WENV183571845
OOCF01000022
263765
Bacillota
TAC
Val
>WENV183572617
OOCF01040702
235095
Bacillota
GGT
Thr
>WENV183572444
OOCF01008769
235095
Bacillota
GGT
Thr
>WENV183572402
OOCF01007005
235095
Bacillota
GGT
Thr
>WENV183572235
OOCF01002197
235095
Bacillota
GGT
Thr
>WENV183572287
OOCF01003076
239079
Bacillota
TAC
Val
>WENV183572290
OOCF01003076
304759
Bacillota
TAC
Val
>WENV183572380
OOCF01006366
411549
Bacillota
TTG
Gln
>WENV183572151
OOCF01001237
411549
Bacillota
TTG
Gln
>WENV183572534
OOCF01018923
148188
Bacillota
CCG
Arg
>WENV183572406
OOCF01007119
148188
Bacillota
CCG
Arg
>WENV183572172
OOCF01001397
235124
Bacillota
TGG
Pro
>WENV183572220
OOCF01001841
338129
Bacillota
TGT
Thr
>WENV183572530
OOCF01017881
157838
Bacillota
GTC
Asp
>WENV183572601
OOCF01035134
144583
Bacillota
ACG
Arg
>WENV183572424
OOCF01008088
144583
Bacillota
ACG
Arg
>WENV183572543
OOCF01021078
247734
Bacillota
TGC
Ala
>WENV183572442
OOCF01008769
235171
Bacillota
CCA
Trp
>WENV183572515
OOCF01015277
144621
Bacillota
GTT
Asn
>WENV183572488
OOCF01012319
144621
Bacillota
GTT
Asn
>WENV183572145
OOCF01001181
144621
Bacillota
GTT
Asn
>WENV183572542
OOCF01020363
58712
Bacillota
CAG
Leu
>WENV183572016
OOCF01000397
58712
Bacillota
CAG
Leu
>WENV183572460
OOCF01010115
245296
Bacillota
CCC
Gly
>WENV183572480
OOCF01011669
272992
Bacillota
CTT
Lys
>WENV183572285
OOCF01003076
239078
Bacillota
TTT
Lys
>WENV183572254
OOCF01002547
144594
Bacillota
CAC
Val
>WENV183572256
OOCF01002552
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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