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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183604284
OODL01002305
158247
Bacillota
>WENV183603913
OODL01000488
144612
Bacillota
TCT
Arg
>WENV183603998
OODL01000767
144612
Bacillota
TCT
Arg
>WENV183604294
OODL01002479
144612
Bacillota
TCT
Arg
>WENV183604114
OODL01001191
235134
Bacillota
GAA
Phe
>WENV183604219
OODL01001751
235098
Bacillota
GAC
Val
>WENV183604256
OODL01002022
235098
Bacillota
GAC
Val
>WENV183604291
OODL01002414
235098
Bacillota
GAC
Val
>WENV183604315
OODL01002814
235098
Bacillota
GAC
Val
>WENV183604345
OODL01003204
235098
Bacillota
GAC
Val
>WENV183604379
OODL01003775
235098
Bacillota
GAC
Val
>WENV183604673
OODL01028797
338152
Bacillota
TTC
Glu
>WENV183604328
OODL01002992
148239
Bacillota
TCT
Arg
>WENV183604627
OODL01018657
44854
Bacillota
TGA
Ser
>WENV183604397
OODL01004235
44854
Bacillota
TGA
Ser
>WENV183604448
OODL01005623
235154
Bacillota
GTT
Asn
>WENV183604754
OODL01045823
246023
Bacillota
TGC
Ala
>WENV183604006
OODL01000800
59312
Bacillota
CAG
Leu
>WENV183604468
OODL01006309
238910
Bacillota
CTT
Lys
>WENV183603552
OODL01000001
245370
Bacillota
TGT
Thr
>WENV183604283
OODL01002297
338147
Bacillota
CTC
Glu
>WENV183604554
OODL01010264
235150
Bacillota
TGC
Ala
>WENV183604581
OODL01013003
155273
Bacillota
CAT
Met
>WENV183604739
OODL01043345
340802
Bacillota
TTG
Gln
>WENV183604330
OODL01002992
340802
Bacillota
TTG
Gln
>WENV183604353
OODL01003433
235091
Bacillota
CTT
Lys
>WENV183604417
OODL01004704
44859
Bacillota
AAG
Leu
>WENV183604232
OODL01001873
11034
Bacillota
GGA
Ser
>WENV183603961
OODL01000631
11034
Bacillota
GGA
Ser
>WENV183604633
OODL01019777
235697
Bacillota
GTT
Asn
>WENV183604731
OODL01041185
235079
Bacillota
GAA
Phe
>WENV183604234
OODL01001880
245298
Bacillota
CGG
Pro
>WENV183604190
OODL01001552
245298
Bacillota
CGG
Pro
>WENV183603861
OODL01000369
245298
Bacillota
CGG
Pro
>WENV183604422
OODL01004936
37269
Bacillota
TGA
Ser
>WENV183604033
OODL01000893
413152
Bacillota
TCC
Gly
>WENV183604329
OODL01002992
144610
Bacillota
GTG
His
>WENV183604115
OODL01001191
240017
Bacillota
GCC
Gly
>WENV183604265
OODL01002087
411547
Bacillota
CTG
Gln
>WENV183604233
OODL01001880
411547
Bacillota
CTG
Gln
>WENV183604189
OODL01001552
411547
Bacillota
CTG
Gln
>WENV183604110
OODL01001185
411547
Bacillota
CTG
Gln
>WENV183604023
OODL01000852
411547
Bacillota
CTG
Gln
>WENV183603860
OODL01000369
411547
Bacillota
CTG
Gln
>WENV183604477
OODL01006767
147684
Bacillota
ACG
Arg
>WENV183604628
OODL01018657
4624
Bacillota
GCT
Ser
>WENV183604398
OODL01004235
4624
Bacillota
GCT
Ser
>WENV183604383
OODL01003796
235095
Bacillota
GGT
Thr
>WENV183604140
OODL01001343
235095
Bacillota
GGT
Thr
>WENV183604099
OODL01001143
235095
Bacillota
GGT
Thr
>WENV183603823
OODL01000282
235095
Bacillota
GGT
Thr
>WENV183604235
OODL01001880
411549
Bacillota
TTG
Gln
>WENV183604188
OODL01001552
411549
Bacillota
TTG
Gln
>WENV183604065
OODL01000994
411549
Bacillota
TTG
Gln
>WENV183604267
OODL01002112
148188
Bacillota
CCG
Arg
>WENV183604160
OODL01001410
148188
Bacillota
CCG
Arg
>WENV183604413
OODL01004692
80612
Bacillota
GTA
Tyr
>WENV183604610
OODL01016701
249522
Bacillota
TAC
Val
>WENV183603617
OODL01000030
249522
Bacillota
TAC
Val
>WENV183604674
OODL01028797
241432
Bacillota
TGT
Thr
>WENV183604517
OODL01008165
235124
Bacillota
TGG
Pro
>WENV183604387
OODL01003920
235124
Bacillota
TGG
Pro
>WENV183604250
OODL01001960
338129
Bacillota
TGT
Thr
>WENV183604015
OODL01000842
338129
Bacillota
TGT
Thr
>WENV183604388
OODL01003941
144583
Bacillota
ACG
Arg
>WENV183604551
OODL01010253
247734
Bacillota
TGC
Ala
>WENV183604381
OODL01003796
235171
Bacillota
CCA
Trp
>WENV183603821
OODL01000282
235171
Bacillota
CCA
Trp
>WENV183604402
OODL01004399
144621
Bacillota
GTT
Asn
>WENV183604464
OODL01006233
235113
Bacillota
GAA
Phe
>WENV183603555
OODL01000001
243098
Bacillota
GGT
Thr
>WENV183604376
OODL01003688
58712
Bacillota
CAG
Leu
>WENV183604225
OODL01001792
58712
Bacillota
CAG
Leu
>WENV183603820
OODL01000282
58712
Bacillota
CAG
Leu
>WENV183604428
OODL01005107
245296
Bacillota
CCC
Gly
>WENV183604141
OODL01001352
245296
Bacillota
CCC
Gly
>WENV183603660
OODL01000054
344240
Bacillota
GCC
Gly
>WENV183604257
OODL01002025
144594
Bacillota
CAC
Val
>WENV183604102
OODL01001146
95563
Bacillota
GTA
Tyr
>WENV183604223
OODL01001782
238945
Bacillota
GCC
Gly
>WENV183604082
OODL01001074
338128
Bacillota
TTC
Glu
>WENV183604012
OODL01000818
338128
Bacillota
TTC
Glu
>WENV183604155
OODL01001373
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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