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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
218 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183605704
OODN01000001
285947
Bacillota
CTG
Gln
>WENV183605705
OODN01000001
20648
Bacillota
CGA
Ser
>WENV183605703
OODN01000001
481771
Bacillota
CCC
Gly
>WENV183605706
OODN01000002
369718
Bacillota
CTC
Glu
>WENV183605709
OODN01000004
179563
Bacillota
GAT
Ile
>WENV183605711
OODN01000004
480366
Bacillota
GGT
Thr
>WENV183605736
OODN01000012
283494
Bacillota
GTT
Asn
>WENV183605745
OODN01000012
401879
Bacillota
TTG
Gln
>WENV183605737
OODN01000012
8730
Bacillota
GGA
Ser
>WENV183605734
OODN01000012
356660
Bacillota
CTT
Lys
>WENV183605735
OODN01000012
356660
Bacillota
CTT
Lys
>WENV183605747
OODN01000012
56397
Bacillota
CAA
Leu
>WENV183605738
OODN01000012
407852
Bacillota
TTC
Glu
>WENV183605740
OODN01000012
284101
Bacillota
GTC
Asp
>WENV183605746
OODN01000012
501142
Bacillota
GCA
Cys
>WENV183605739
OODN01000012
302092
Bacillota
TAC
Val
>WENV183605744
OODN01000012
285949
Bacillota
GTG
His
>WENV183605743
OODN01000012
480918
Bacillota
>WENV183605741
OODN01000012
283719
Bacillota
GAA
Phe
>WENV183605742
OODN01000012
105208
Bacillota
GTA
Tyr
>WENV183605758
OODN01000014
400904
Bacillota
CCT
Arg
>WENV183605767
OODN01000019
13634
Bacillota
CGA
Ser
>WENV183605766
OODN01000019
74725
Bacillota
CAG
Leu
>WENV183605773
OODN01000022
180990
Bacillota
CGG
Pro
>WENV183605772
OODN01000022
285946
Bacillota
GGT
Thr
>WENV183605818
OODN01000047
73009
Bacillota
CAG
Leu
>WENV183605821
OODN01000047
291581
Bacillota
CGG
Pro
>WENV183605820
OODN01000047
480322
Bacillota
CTG
Gln
>WENV183605819
OODN01000047
480324
Bacillota
TTG
Gln
>WENV183605831
OODN01000051
74057
Bacillota
CAG
Leu
>WENV183605849
OODN01000061
432249
Bacillota
CCG
Arg
>WENV183605857
OODN01000063
175868
Bacillota
GTT
Asn
>WENV183605856
OODN01000063
398854
Bacillota
CTC
Glu
>WENV183605858
OODN01000065
284389
Bacillota
CTT
Lys
>WENV183605862
OODN01000067
398833
Bacillota
TGT
Thr
>WENV183605874
OODN01000079
180992
Bacillota
CCT
Arg
>WENV183605920
OODN01000119
175859
Bacillota
TCT
Arg
>WENV183605931
OODN01000132
180991
Bacillota
TCT
Arg
>WENV183605932
OODN01000132
74129
Bacillota
CAG
Leu
>WENV183605933
OODN01000135
99852
Bacillota
GTA
Tyr
>WENV183605940
OODN01000142
480359
Bacillota
TCC
Gly
>WENV183605952
OODN01000152
284390
Bacillota
CGT
Thr
>WENV183605951
OODN01000152
53302
Bacillota
AAG
Leu
>WENV183605954
OODN01000153
400600
Bacillota
TTG
Gln
>WENV183605955
OODN01000154
180666
Bacillota
GGT
Thr
>WENV183605956
OODN01000157
175831
Bacillota
ACG
Arg
>WENV183605957
OODN01000159
408813
Bacillota
TCG
Arg
>WENV183605963
OODN01000164
480322
Bacillota
CTG
Gln
>WENV183605970
OODN01000174
5692
Bacillota
GCT
Ser
>WENV183605969
OODN01000174
56074
Bacillota
TGA
Ser
>WENV183605974
OODN01000179
401879
Bacillota
TTG
Gln
>WENV183605975
OODN01000179
46953
Bacillota
AAG
Leu
>WENV183605973
OODN01000179
285949
Bacillota
GTG
His
>WENV183605972
OODN01000179
480918
Bacillota
>WENV183605971
OODN01000179
105208
Bacillota
GTA
Tyr
>WENV183605978
OODN01000187
57121
Bacillota
GGA
Ser
>WENV183605979
OODN01000194
73009
Bacillota
CAG
Leu
>WENV183606008
OODN01000246
179252
Bacillota
CGG
Pro
>WENV183606009
OODN01000247
283739
Bacillota
AGT
Thr
>WENV183606018
OODN01000273
283738
Bacillota
CGT
Thr
>WENV183606020
OODN01000273
400600
Bacillota
TTG
Gln
>WENV183606036
OODN01000290
179563
Bacillota
GAT
Ile
>WENV183606039
OODN01000301
418726
Bacillota
TGT
Thr
>WENV183606041
OODN01000301
418726
Bacillota
TGT
Thr
>WENV183606040
OODN01000301
280641
Bacillota
GTT
Asn
>WENV183606054
OODN01000329
418726
Bacillota
TGT
Thr
>WENV183606050
OODN01000329
280639
Bacillota
TTT
Lys
>WENV183606052
OODN01000329
298270
Bacillota
TAC
Val
>WENV183606051
OODN01000329
443965
Bacillota
>WENV183606058
OODN01000342
280473
Bacillota
TGG
Pro
>WENV183606061
OODN01000344
280641
Bacillota
GTT
Asn
>WENV183606065
OODN01000363
399281
Bacillota
>WENV183606076
OODN01000372
156219
Bacillota
GTG
His
>WENV183606081
OODN01000392
5702
Bacillota
GGA
Ser
>WENV183606080
OODN01000392
73132
Bacillota
CAG
Leu
>WENV183606090
OODN01000417
280447
Bacillota
GAC
Val
>WENV183606096
OODN01000460
285948
Bacillota
CGT
Thr
>WENV183606102
OODN01000483
179755
Bacillota
CCG
Arg
>WENV183606106
OODN01000494
349107
Bacillota
GCC
Gly
>WENV183606126
OODN01000564
180668
Bacillota
TCT
Arg
>WENV183606127
OODN01000577
27216
Bacillota
GCT
Ser
>WENV183606129
OODN01000596
20615
Bacillota
CGA
Ser
>WENV183606136
OODN01000660
104114
Bacillota
CAG
Leu
>WENV183606139
OODN01000666
280447
Bacillota
GAC
Val
>WENV183606141
OODN01000675
290391
Bacillota
TAC
Val
>WENV183606157
OODN01000702
99852
Bacillota
GTA
Tyr
>WENV183606153
OODN01000702
349107
Bacillota
GCC
Gly
>WENV183606155
OODN01000702
349107
Bacillota
GCC
Gly
>WENV183606156
OODN01000702
405363
Bacillota
GCA
Cys
>WENV183606152
OODN01000702
280428
Bacillota
GAA
Phe
>WENV183606154
OODN01000702
175849
Bacillota
GTC
Asp
>WENV183606171
OODN01000740
175842
Bacillota
CAC
Val
>WENV183606179
OODN01000792
190476
Bacillota
CAT
Met
>WENV183606180
OODN01000792
398832
Bacillota
TTC
Glu
>WENV183606190
OODN01000852
179176
Bacillota
ACG
Arg
>WENV183606194
OODN01000864
175868
Bacillota
GTT
Asn
>WENV183606196
OODN01000882
284101
Bacillota
GTC
Asp
>WENV183606213
OODN01001023
354793
Bacillota
GTG
His
>WENV183606216
OODN01001053
322848
Bacillota
CTT
Lys
>WENV183606215
OODN01001053
398854
Bacillota
CTC
Glu
>WENV183606226
OODN01001064
480524
Bacillota
GCA
Cys
>WENV183606223
OODN01001064
506701
Bacillota
CCA
Trp
>WENV183606224
OODN01001064
284099
Bacillota
GTG
His
>WENV183606233
OODN01001113
20943
Bacillota
CGA
Ser
>WENV183606238
OODN01001218
285537
Bacillota
CCT
Arg
>WENV183606241
OODN01001219
280444
Bacillota
GGT
Thr
>WENV183606240
OODN01001219
175849
Bacillota
GTC
Asp
>WENV183606260
OODN01001445
280444
Bacillota
GGT
Thr
>WENV183606261
OODN01001447
497729
Bacillota
CCA
Trp
>WENV183606270
OODN01001523
229015
Bacillota
GTG
His
>WENV183606271
OODN01001523
401685
Bacillota
TTG
Gln
>WENV183606277
OODN01001622
141202
Bacillota
CAA
Leu
>WENV183606279
OODN01001677
20943
Bacillota
CGA
Ser
>WENV183606289
OODN01001784
27216
Bacillota
GCT
Ser
>WENV183606290
OODN01001804
284723
Bacillota
TAC
Val
>WENV183606301
OODN01001914
349107
Bacillota
GCC
Gly
>WENV183606303
OODN01001914
280428
Bacillota
GAA
Phe
>WENV183606302
OODN01001914
175849
Bacillota
GTC
Asp
>WENV183606311
OODN01002174
289717
Bacillota
CTT
Lys
>WENV183606326
OODN01002461
445407
Bacillota
GCC
Gly
>WENV183606331
OODN01002552
482593
Bacillota
CCC
Gly
>WENV183606334
OODN01002621
156219
Bacillota
GTG
His
>WENV183606356
OODN01002827
487004
Bacillota
TCC
Gly
>WENV183606358
OODN01002827
20456
Bacillota
GCT
Ser
>WENV183606365
OODN01002945
289717
Bacillota
CTT
Lys
>WENV183606378
OODN01003303
20942
Bacillota
GGA
Ser
>WENV183606379
OODN01003342
141202
Bacillota
CAA
Leu
>WENV183606388
OODN01003953
46658
Bacillota
AAG
Leu
>WENV183606389
OODN01003983
20932
Bacillota
GCT
Ser
>WENV183606390
OODN01003987
104114
Bacillota
CAG
Leu
>WENV183606395
OODN01004014
280646
Bacillota
TGC
Ala
>WENV183606398
OODN01004177
288974
Bacillota
CTT
Lys
>WENV183606399
OODN01004213
291576
Bacillota
CCC
Gly
>WENV183606400
OODN01004274
118669
Bacillota
GTA
Tyr
>WENV183606401
OODN01004335
73664
Bacillota
CAG
Leu
>WENV183606403
OODN01004520
184497
Bacillota
GGG
Pro
>WENV183606404
OODN01004607
20942
Bacillota
GGA
Ser
>WENV183606411
OODN01004887
179176
Bacillota
ACG
Arg
>WENV183606421
OODN01005043
432453
Bacillota
TTC
Glu
>WENV183606422
OODN01005043
289715
Bacillota
TAC
Val
>WENV183606423
OODN01005049
119459
Bacillota
TAG
Leu
>WENV183606429
OODN01005438
291553
Bacillota
GAA
Phe
>WENV183606428
OODN01005438
280547
Bacillota
GTC
Asp
>WENV183606431
OODN01005747
20932
Bacillota
GCT
Ser
>WENV183606439
OODN01005948
291553
Bacillota
GAA
Phe
>WENV183606438
OODN01005948
280547
Bacillota
GTC
Asp
>WENV183606442
OODN01006059
280500
Bacillota
TGC
Ala
>WENV183606444
OODN01006276
432453
Bacillota
TTC
Glu
>WENV183606445
OODN01006276
289715
Bacillota
TAC
Val
>WENV183606449
OODN01006396
432453
Bacillota
TTC
Glu
>WENV183606450
OODN01006396
289715
Bacillota
TAC
Val
>WENV183606454
OODN01006443
482593
Bacillota
CCC
Gly
>WENV183606460
OODN01007071
179810
Bacillota
TCT
Arg
>WENV183606463
OODN01007071
280476
Bacillota
TTT
Lys
>WENV183606461
OODN01007071
175857
Bacillota
GTG
His
>WENV183606467
OODN01007232
119459
Bacillota
TAG
Leu
>WENV183606469
OODN01007292
48505
Bacillota
TGA
Ser
>WENV183606470
OODN01007457
333281
Bacillota
GTT
Asn
>WENV183606473
OODN01007577
480337
Bacillota
TCC
Gly
>WENV183606472
OODN01007577
208539
Bacillota
TGG
Pro
>WENV183606474
OODN01007577
184539
Bacillota
TCT
Arg
>WENV183606478
OODN01007600
480360
Bacillota
GCA
Cys
>WENV183606476
OODN01007600
176015
Bacillota
TGG
Pro
>WENV183606480
OODN01007600
280640
Bacillota
TAC
Val
>WENV183606477
OODN01007600
176019
Bacillota
GTG
His
>WENV183606484
OODN01007691
298260
Bacillota
GTT
Asn
>WENV183606487
OODN01007778
432453
Bacillota
TTC
Glu
>WENV183606488
OODN01007778
289715
Bacillota
TAC
Val
>WENV183606493
OODN01008669
398852
Bacillota
CTC
Glu
>WENV183606507
OODN01009771
480520
Bacillota
TCC
Gly
>WENV183606512
OODN01009771
141334
Bacillota
TAG
Leu
>WENV183606509
OODN01009771
330433
Bacillota
GTG
His
>WENV183606511
OODN01009771
354380
Bacillota
TTT
Lys
>WENV183606508
OODN01009771
203851
Bacillota
TCT
Arg
>WENV183606519
OODN01011092
285945
Bacillota
TTT
Lys
>WENV183606520
OODN01011092
281413
Bacillota
TGT
Thr
>WENV183606518
OODN01011092
302092
Bacillota
TAC
Val
>WENV183606523
OODN01011092
178962
Bacillota
ACG
Arg
>WENV183606524
OODN01011092
178962
Bacillota
ACG
Arg
>WENV183606533
OODN01012923
319100
Bacillota
GTG
His
>WENV183606537
OODN01012949
487804
Bacillota
GGT
Thr
>WENV183606561
OODN01015027
407852
Bacillota
TTC
Glu
>WENV183606556
OODN01015027
284101
Bacillota
GTC
Asp
>WENV183606554
OODN01015027
9377
Bacillota
TGA
Ser
>WENV183606557
OODN01015027
283492
Bacillota
GAA
Phe
>WENV183606560
OODN01015027
21320
Bacillota
GCT
Ser
>WENV183606566
OODN01016413
352588
Bacillota
CAT
Met
>WENV183606567
OODN01016642
280642
Bacillota
TTG
Gln
>WENV183606568
OODN01016642
280639
Bacillota
TTT
Lys
>WENV183606571
OODN01016642
176015
Bacillota
TGG
Pro
>WENV183606573
OODN01016642
176015
Bacillota
TGG
Pro
>WENV183606578
OODN01016860
283738
Bacillota
CGT
Thr
>WENV183606581
OODN01017278
333281
Bacillota
GTT
Asn
>WENV183606580
OODN01017278
445407
Bacillota
GCC
Gly
>WENV183606582
OODN01017278
289761
Bacillota
TTT
Lys
>WENV183606586
OODN01018977
432453
Bacillota
TTC
Glu
>WENV183606587
OODN01018977
289715
Bacillota
TAC
Val
>WENV183606593
OODN01019033
46687
Bacillota
TAA
Leu
>WENV183606602
OODN01019822
11874
Bacillota
GCT
Ser
>WENV183606612
OODN01020526
179251
Bacillota
CAT
Met
>WENV183606609
OODN01020526
400600
Bacillota
TTG
Gln
>WENV183606620
OODN01022443
178956
Bacillota
GAT
Ile
>WENV183606615
OODN01022443
334757
Bacillota
TTT
Lys
>WENV183606622
OODN01022575
298270
Bacillota
TAC
Val
>WENV183606624
OODN01022575
280641
Bacillota
GTT
Asn
>WENV183606621
OODN01022575
443965
Bacillota
>WENV183606625
OODN01023031
20942
Bacillota
GGA
Ser
>WENV183606627
OODN01023666
398857
Bacillota
TTC
Glu
>WENV183606632
OODN01024904
184537
Bacillota
ACG
Arg
>WENV183606636
OODN01025165
480359
Bacillota
TCC
Gly
>WENV183606637
OODN01025165
298270
Bacillota
TAC
Val
>WENV183606639
OODN01025165
280641
Bacillota
GTT
Asn
>WENV183606635
OODN01025165
443965
Bacillota
>WENV183606640
OODN01025195
58120
Bacillota
AAG
Leu
>WENV183606641
OODN01025315
20932
Bacillota
GCT
Ser
>WENV183606653
OODN01028261
334757
Bacillota
TTT
Lys
>WENV183606654
OODN01028261
283742
Bacillota
TGT
Thr
>WENV183606659
OODN01028692
339995
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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