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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183609719
OODR01001257
235134
Bacillota
GAA
Phe
>WENV183609705
OODR01001062
235098
Bacillota
GAC
Val
>WENV183609947
OODR01012817
338152
Bacillota
TTC
Glu
>WENV183609579
OODR01000159
148239
Bacillota
TCT
Arg
>WENV183610064
OODR01036148
235154
Bacillota
GTT
Asn
>WENV183609862
OODR01006138
246023
Bacillota
TGC
Ala
>WENV183609968
OODR01015430
246023
Bacillota
TGC
Ala
>WENV183609900
OODR01008398
235150
Bacillota
TGC
Ala
>WENV183609993
OODR01019151
341763
Bacillota
CTC
Glu
>WENV183609772
OODR01002564
182792
Bacillota
GTC
Asp
>WENV183609955
OODR01013758
11034
Bacillota
GGA
Ser
>WENV183609771
OODR01002564
235117
Bacillota
TAC
Val
>WENV183609580
OODR01000159
156937
Bacillota
GTG
His
>WENV183609713
OODR01001193
338149
Bacillota
CTC
Glu
>WENV183609634
OODR01000416
169968
Bacillota
CAT
Met
>WENV183609884
OODR01007523
413152
Bacillota
TCC
Gly
>WENV183610072
OODR01038012
144599
Bacillota
GTC
Asp
>WENV183609720
OODR01001257
240017
Bacillota
GCC
Gly
>WENV183609776
OODR01002713
411547
Bacillota
CTG
Gln
>WENV183609766
OODR01002493
411547
Bacillota
CTG
Gln
>WENV183609978
OODR01016333
4624
Bacillota
GCT
Ser
>WENV183609742
OODR01001729
263765
Bacillota
TAC
Val
>WENV183609717
OODR01001257
263765
Bacillota
TAC
Val
>WENV183609773
OODR01002564
235095
Bacillota
GGT
Thr
>WENV183609711
OODR01001187
411549
Bacillota
TTG
Gln
>WENV183609825
OODR01004015
80612
Bacillota
GTA
Tyr
>WENV183609889
OODR01007548
235124
Bacillota
TGG
Pro
>WENV183610073
OODR01038012
254433
Bacillota
TAC
Val
>WENV183609654
OODR01000550
338129
Bacillota
TGT
Thr
>WENV183609656
OODR01000567
144583
Bacillota
ACG
Arg
>WENV183609975
OODR01016288
247734
Bacillota
TGC
Ala
>WENV183609714
OODR01001193
144621
Bacillota
GTT
Asn
>WENV183610048
OODR01032604
243098
Bacillota
GGT
Thr
>WENV183609725
OODR01001434
58712
Bacillota
CAG
Leu
>WENV183609745
OODR01001843
245296
Bacillota
CCC
Gly
>WENV183609676
OODR01000819
344240
Bacillota
GCC
Gly
>WENV183609957
OODR01013935
144594
Bacillota
CAC
Val
>WENV183609635
OODR01000416
272488
Bacillota
GAA
Phe
>WENV183609770
OODR01002564
249259
Bacillota
GCC
Gly
>WENV183609675
OODR01000819
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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