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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181963573
OGZQ01000006
235203
Bacteroidota
TTT
Lys
>WENV181963574
OGZQ01000007
411550
Bacteroidota
CTG
Gln
>WENV181963580
OGZQ01000009
338486
Bacteroidota
CAT
Met
>WENV181963584
OGZQ01000011
58715
Bacteroidota
GAG
Leu
>WENV181963600
OGZQ01000014
425638
Bacteroidota
CTG
Gln
>WENV181963626
OGZQ01000032
80614
Bacteroidota
>WENV181963627
OGZQ01000032
144659
Bacteroidota
GTG
His
>WENV181963631
OGZQ01000035
147439
Bacteroidota
TCT
Arg
>WENV181963641
OGZQ01000043
343138
Bacteroidota
CCT
Arg
>WENV181963646
OGZQ01000046
235203
Bacteroidota
TTT
Lys
>WENV181963656
OGZQ01000079
338486
Bacteroidota
CAT
Met
>WENV181963672
OGZQ01000107
240012
Bacteroidota
CCC
Gly
>WENV181963676
OGZQ01000112
95875
Bacteroidota
TAG
Leu
>WENV181963680
OGZQ01000129
132360
Bacteroidota
GGG
Pro
>WENV181963689
OGZQ01000148
272983
Bacteroidota
CGT
Thr
>WENV181963690
OGZQ01000149
59689
Bacteroidota
CAG
Leu
>WENV181963714
OGZQ01000190
235129
Bacteroidota
GCC
Gly
>WENV181963717
OGZQ01000197
50727
Bacteroidota
TGA
Ser
>WENV181963718
OGZQ01000197
238121
Bacteroidota
CTT
Lys
>WENV181963719
OGZQ01000197
45423
Bacteroidota
TGA
Ser
>WENV181963720
OGZQ01000199
95618
Bacteroidota
TAG
Leu
>WENV181963721
OGZQ01000202
338314
Bacteroidota
CCT
Arg
>WENV181963724
OGZQ01000216
411543
Bacteroidota
CTG
Gln
>WENV181963725
OGZQ01000218
338132
Bacteroidota
GCA
Cys
>WENV181963727
OGZQ01000218
23696
Bacteroidota
GCT
Ser
>WENV181963730
OGZQ01000224
58714
Bacteroidota
CAA
Leu
>WENV181963740
OGZQ01000251
338164
Bacteroidota
TTC
Glu
>WENV181963749
OGZQ01000278
338132
Bacteroidota
GCA
Cys
>WENV181963760
OGZQ01000304
181746
Bacteroidota
GGC
Ala
>WENV181963762
OGZQ01000310
235097
Bacteroidota
TTT
Lys
>WENV181963789
OGZQ01000404
16224
Bacteroidota
GGA
Ser
>WENV181963791
OGZQ01000408
411629
Bacteroidota
TTG
Gln
>WENV181963816
OGZQ01000506
235207
Bacteroidota
CAT
Met
>WENV181963818
OGZQ01000515
235097
Bacteroidota
TTT
Lys
>WENV181963820
OGZQ01000526
144688
Bacteroidota
CAT
Met
>WENV181963824
OGZQ01000559
44852
Bacteroidota
TAA
Leu
>WENV181963830
OGZQ01000622
235180
Bacteroidota
CCA
Trp
>WENV181963842
OGZQ01000657
144933
Bacteroidota
TCT
Arg
>WENV181963844
OGZQ01000667
338132
Bacteroidota
GCA
Cys
>WENV181963868
OGZQ01000776
80607
Bacteroidota
GTA
Tyr
>WENV181963871
OGZQ01000785
338132
Bacteroidota
GCA
Cys
>WENV181963873
OGZQ01000817
235102
Bacteroidota
CGT
Thr
>WENV181963909
OGZQ01001179
113604
Bacteroidota
>WENV181963911
OGZQ01001210
144596
Bacteroidota
GGC
Ala
>WENV181963916
OGZQ01001336
95559
Bacteroidota
TAG
Leu
>WENV181963928
OGZQ01001453
419272
Bacteroidota
CTG
Gln
>WENV181963930
OGZQ01001507
338125
Bacteroidota
CCT
Arg
>WENV181963959
OGZQ01002125
193809
Bacteroidota
CAT
Met
>WENV181963976
OGZQ01002625
144656
Bacteroidota
GTG
His
>WENV181963977
OGZQ01002636
144655
Bacteroidota
GGC
Ala
>WENV181963979
OGZQ01002700
80607
Bacteroidota
GTA
Tyr
>WENV181963984
OGZQ01002858
50727
Bacteroidota
TGA
Ser
>WENV181963985
OGZQ01002886
144657
Bacteroidota
CGG
Pro
>WENV181963986
OGZQ01002886
235180
Bacteroidota
CCA
Trp
>WENV181963987
OGZQ01002936
235182
Bacteroidota
>WENV181963995
OGZQ01003277
415410
Bacteroidota
TTG
Gln
>WENV181964011
OGZQ01003672
338155
Bacteroidota
CTC
Glu
>WENV181964065
OGZQ01005760
338124
Bacteroidota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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