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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
77 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183549580
OOAZ01003543
341950
Bacteroidota
>WENV183549355
OOAZ01000814
80614
Bacteroidota
>WENV183549010
OOAZ01000024
58714
Bacteroidota
CAA
Leu
>WENV183549160
OOAZ01000168
59689
Bacteroidota
CAG
Leu
>WENV183549527
OOAZ01002249
243025
Bacteroidota
CAT
Met
>WENV183549047
OOAZ01000053
338486
Bacteroidota
CAT
Met
>WENV183548981
OOAZ01000002
338486
Bacteroidota
CAT
Met
>WENV183549588
OOAZ01003652
235207
Bacteroidota
CAT
Met
>WENV183549577
OOAZ01003412
235207
Bacteroidota
CAT
Met
>WENV183549369
OOAZ01000885
235207
Bacteroidota
CAT
Met
>WENV183549180
OOAZ01000198
235165
Bacteroidota
CCA
Trp
>WENV183549151
OOAZ01000165
235180
Bacteroidota
CCA
Trp
>WENV183548990
OOAZ01000005
240012
Bacteroidota
CCC
Gly
>WENV183549495
OOAZ01001826
338124
Bacteroidota
CCG
Arg
>WENV183549036
OOAZ01000043
338124
Bacteroidota
CCG
Arg
>WENV183548980
OOAZ01000001
343138
Bacteroidota
CCT
Arg
>WENV183549489
OOAZ01001724
338125
Bacteroidota
CCT
Arg
>WENV183549407
OOAZ01001074
338125
Bacteroidota
CCT
Arg
>WENV183549509
OOAZ01001998
144657
Bacteroidota
CGG
Pro
>WENV183549214
OOAZ01000287
235102
Bacteroidota
CGT
Thr
>WENV183549263
OOAZ01000467
419272
Bacteroidota
CTG
Gln
>WENV183549027
OOAZ01000034
419272
Bacteroidota
CTG
Gln
>WENV183548988
OOAZ01000004
411550
Bacteroidota
CTG
Gln
>WENV183549506
OOAZ01001921
425638
Bacteroidota
CTG
Gln
>WENV183549224
OOAZ01000332
425638
Bacteroidota
CTG
Gln
>WENV183548991
OOAZ01000006
425638
Bacteroidota
CTG
Gln
>WENV183549555
OOAZ01002723
238121
Bacteroidota
CTT
Lys
>WENV183549554
OOAZ01002723
238121
Bacteroidota
CTT
Lys
>WENV183549264
OOAZ01000471
58715
Bacteroidota
GAG
Leu
>WENV183549920
OOAZ01049795
153993
Bacteroidota
GAT
Ile
>WENV183549538
OOAZ01002470
338132
Bacteroidota
GCA
Cys
>WENV183549438
OOAZ01001378
338132
Bacteroidota
GCA
Cys
>WENV183549374
OOAZ01000909
338132
Bacteroidota
GCA
Cys
>WENV183549128
OOAZ01000137
338132
Bacteroidota
GCA
Cys
>WENV183549124
OOAZ01000136
338132
Bacteroidota
GCA
Cys
>WENV183549042
OOAZ01000050
338132
Bacteroidota
GCA
Cys
>WENV183549189
OOAZ01000225
235129
Bacteroidota
GCC
Gly
>WENV183549452
OOAZ01001459
23696
Bacteroidota
GCT
Ser
>WENV183549028
OOAZ01000034
19317
Bacteroidota
GGA
Ser
>WENV183549473
OOAZ01001574
16224
Bacteroidota
GGA
Ser
>WENV183549657
OOAZ01006255
16220
Bacteroidota
GGA
Ser
>WENV183549512
OOAZ01002027
144596
Bacteroidota
GGC
Ala
>WENV183549496
OOAZ01001870
144596
Bacteroidota
GGC
Ala
>WENV183549054
OOAZ01000062
144639
Bacteroidota
GGC
Ala
>WENV183549530
OOAZ01002274
151960
Bacteroidota
GGC
Ala
>WENV183549280
OOAZ01000493
132360
Bacteroidota
GGG
Pro
>WENV183549201
OOAZ01000252
132360
Bacteroidota
GGG
Pro
>WENV183549314
OOAZ01000590
80607
Bacteroidota
GTA
Tyr
>WENV183549200
OOAZ01000246
80607
Bacteroidota
GTA
Tyr
>WENV183549014
OOAZ01000026
185921
Bacteroidota
GTC
Asp
>WENV183549570
OOAZ01003045
144656
Bacteroidota
GTG
His
>WENV183549218
OOAZ01000315
150485
Bacteroidota
GTT
Asn
>WENV183549722
OOAZ01009263
44852
Bacteroidota
TAA
Leu
>WENV183549463
OOAZ01001509
44852
Bacteroidota
TAA
Leu
>WENV183549420
OOAZ01001164
44852
Bacteroidota
TAA
Leu
>WENV183549143
OOAZ01000153
44852
Bacteroidota
TAA
Leu
>WENV183549182
OOAZ01000199
95875
Bacteroidota
TAG
Leu
>WENV183549523
OOAZ01002205
144933
Bacteroidota
TCT
Arg
>WENV183549594
OOAZ01003927
144933
Bacteroidota
TCT
Arg
>WENV183548989
OOAZ01000005
147439
Bacteroidota
TCT
Arg
>WENV183549556
OOAZ01002723
46165
Bacteroidota
TGA
Ser
>WENV183549236
OOAZ01000364
45423
Bacteroidota
TGA
Ser
>WENV183549449
OOAZ01001454
50727
Bacteroidota
TGA
Ser
>WENV183549433
OOAZ01001341
50727
Bacteroidota
TGA
Ser
>WENV183549347
OOAZ01000764
50727
Bacteroidota
TGA
Ser
>WENV183549298
OOAZ01000528
50727
Bacteroidota
TGA
Ser
>WENV183549117
OOAZ01000124
50727
Bacteroidota
TGA
Ser
>WENV183549267
OOAZ01000479
145504
Bacteroidota
TGT
Thr
>WENV183548977
OOAZ01000001
338164
Bacteroidota
TTC
Glu
>WENV183549342
OOAZ01000752
353927
Bacteroidota
TTC
Glu
>WENV183549457
OOAZ01001501
415410
Bacteroidota
TTG
Gln
>WENV183549397
OOAZ01000986
415410
Bacteroidota
TTG
Gln
>WENV183549360
OOAZ01000842
415410
Bacteroidota
TTG
Gln
>WENV183549867
OOAZ01029400
411629
Bacteroidota
TTG
Gln
>WENV183549220
OOAZ01000319
235203
Bacteroidota
TTT
Lys
>WENV183548978
OOAZ01000001
235203
Bacteroidota
TTT
Lys
>WENV183549533
OOAZ01002368
239647
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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