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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183557005
OOBP01000005
235097
Bacteroidota
TTT
Lys
>WENV183557595
OOBP01001622
235097
Bacteroidota
TTT
Lys
>WENV183557034
OOBP01000016
235102
Bacteroidota
CGT
Thr
>WENV183557239
OOBP01000192
338155
Bacteroidota
CTC
Glu
>WENV183557749
OOBP01005110
338155
Bacteroidota
CTC
Glu
>WENV183557007
OOBP01000006
95618
Bacteroidota
TAG
Leu
>WENV183557037
OOBP01000018
415410
Bacteroidota
TTG
Gln
>WENV183557189
OOBP01000141
415410
Bacteroidota
TTG
Gln
>WENV183557096
OOBP01000053
411543
Bacteroidota
CTG
Gln
>WENV183557198
OOBP01000153
235182
Bacteroidota
>WENV183557411
OOBP01000554
272983
Bacteroidota
CGT
Thr
>WENV183557187
OOBP01000139
338124
Bacteroidota
CCG
Arg
>WENV183557100
OOBP01000054
338132
Bacteroidota
GCA
Cys
>WENV183557041
OOBP01000019
338132
Bacteroidota
GCA
Cys
>WENV183556998
OOBP01000004
338132
Bacteroidota
GCA
Cys
>WENV183557181
OOBP01000132
144688
Bacteroidota
CAT
Met
>WENV183557268
OOBP01000227
193809
Bacteroidota
CAT
Met
>WENV183557094
OOBP01000050
181746
Bacteroidota
GGC
Ala
>WENV183557046
OOBP01000021
144933
Bacteroidota
TCT
Arg
>WENV183557122
OOBP01000072
144656
Bacteroidota
GTG
His
>WENV183557376
OOBP01000444
235207
Bacteroidota
CAT
Met
>WENV183557294
OOBP01000263
235207
Bacteroidota
CAT
Met
>WENV183557091
OOBP01000047
80607
Bacteroidota
GTA
Tyr
>WENV183557061
OOBP01000029
80607
Bacteroidota
GTA
Tyr
>WENV183557001
OOBP01000005
80607
Bacteroidota
GTA
Tyr
>WENV183556977
OOBP01000001
80607
Bacteroidota
GTA
Tyr
>WENV183557099
OOBP01000054
52358
Bacteroidota
TGA
Ser
>WENV183557098
OOBP01000054
52358
Bacteroidota
TGA
Ser
>WENV183557053
OOBP01000023
52358
Bacteroidota
TGA
Ser
>WENV183557003
OOBP01000005
52358
Bacteroidota
TGA
Ser
>WENV183557126
OOBP01000083
52358
Bacteroidota
TGA
Ser
>WENV183556972
OOBP01000001
144590
Bacteroidota
GTT
Asn
>WENV183556971
OOBP01000001
144590
Bacteroidota
GTT
Asn
>WENV183557237
OOBP01000191
95559
Bacteroidota
TAG
Leu
>WENV183557130
OOBP01000087
419272
Bacteroidota
CTG
Gln
>WENV183556994
OOBP01000004
144655
Bacteroidota
GGC
Ala
>WENV183557173
OOBP01000123
338314
Bacteroidota
CCT
Arg
>WENV183556975
OOBP01000001
44852
Bacteroidota
TAA
Leu
>WENV183557065
OOBP01000033
19528
Bacteroidota
GGA
Ser
>WENV183557097
OOBP01000053
132360
Bacteroidota
GGG
Pro
>WENV183557055
OOBP01000024
132360
Bacteroidota
GGG
Pro
>WENV183557054
OOBP01000024
425638
Bacteroidota
CTG
Gln
>WENV183557032
OOBP01000014
425638
Bacteroidota
CTG
Gln
>WENV183557600
OOBP01001688
19317
Bacteroidota
GGA
Ser
>WENV183557748
OOBP01005110
23696
Bacteroidota
GCT
Ser
>WENV183557123
OOBP01000072
16224
Bacteroidota
GGA
Ser
>WENV183557131
OOBP01000087
16220
Bacteroidota
GGA
Ser
>WENV183557016
OOBP01000011
338125
Bacteroidota
CCT
Arg
>WENV183556973
OOBP01000001
338125
Bacteroidota
CCT
Arg
>WENV183557243
OOBP01000200
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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