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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
73 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183584663
OOCR01000001
338125
Bacteroidota
CCT
Arg
>WENV183584664
OOCR01000001
415410
Bacteroidota
TTG
Gln
>WENV183584665
OOCR01000002
338124
Bacteroidota
CCG
Arg
>WENV183584666
OOCR01000002
235102
Bacteroidota
CGT
Thr
>WENV183584668
OOCR01000003
338132
Bacteroidota
GCA
Cys
>WENV183584676
OOCR01000007
44852
Bacteroidota
TAA
Leu
>WENV183584678
OOCR01000009
414426
Bacteroidota
CTG
Gln
>WENV183584686
OOCR01000014
144590
Bacteroidota
GTT
Asn
>WENV183584687
OOCR01000014
144590
Bacteroidota
GTT
Asn
>WENV183584689
OOCR01000014
44852
Bacteroidota
TAA
Leu
>WENV183584694
OOCR01000019
425638
Bacteroidota
CTG
Gln
>WENV183584697
OOCR01000020
146800
Bacteroidota
>WENV183584702
OOCR01000022
145504
Bacteroidota
TGT
Thr
>WENV183584704
OOCR01000023
95875
Bacteroidota
TAG
Leu
>WENV183584705
OOCR01000024
235207
Bacteroidota
CAT
Met
>WENV183584707
OOCR01000026
338132
Bacteroidota
GCA
Cys
>WENV183584722
OOCR01000043
353927
Bacteroidota
TTC
Glu
>WENV183584725
OOCR01000046
80607
Bacteroidota
GTA
Tyr
>WENV183584726
OOCR01000047
419272
Bacteroidota
CTG
Gln
>WENV183584727
OOCR01000047
16220
Bacteroidota
GGA
Ser
>WENV183584729
OOCR01000051
16224
Bacteroidota
GGA
Ser
>WENV183584737
OOCR01000056
144656
Bacteroidota
GTG
His
>WENV183584760
OOCR01000075
144657
Bacteroidota
CGG
Pro
>WENV183584775
OOCR01000079
144933
Bacteroidota
TCT
Arg
>WENV183584782
OOCR01000081
235165
Bacteroidota
CCA
Trp
>WENV183584792
OOCR01000096
132360
Bacteroidota
GGG
Pro
>WENV183584793
OOCR01000096
235097
Bacteroidota
TTT
Lys
>WENV183584796
OOCR01000102
243025
Bacteroidota
CAT
Met
>WENV183584806
OOCR01000112
144655
Bacteroidota
GGC
Ala
>WENV183584819
OOCR01000118
235097
Bacteroidota
TTT
Lys
>WENV183584822
OOCR01000128
341950
Bacteroidota
>WENV183584828
OOCR01000131
243025
Bacteroidota
CAT
Met
>WENV183584833
OOCR01000136
344692
Bacteroidota
GGT
Thr
>WENV183584837
OOCR01000145
95559
Bacteroidota
TAG
Leu
>WENV183584844
OOCR01000159
58715
Bacteroidota
GAG
Leu
>WENV183584877
OOCR01000217
235129
Bacteroidota
GCC
Gly
>WENV183584879
OOCR01000220
154643
Bacteroidota
CAT
Met
>WENV183584888
OOCR01000242
80835
Bacteroidota
GTA
Tyr
>WENV183584896
OOCR01000255
238121
Bacteroidota
CTT
Lys
>WENV183584935
OOCR01000339
17323
Bacteroidota
GGA
Ser
>WENV183584974
OOCR01000421
338486
Bacteroidota
CAT
Met
>WENV183584983
OOCR01000440
50727
Bacteroidota
TGA
Ser
>WENV183584990
OOCR01000470
235207
Bacteroidota
CAT
Met
>WENV183584991
OOCR01000471
415410
Bacteroidota
TTG
Gln
>WENV183585028
OOCR01000635
144639
Bacteroidota
GGC
Ala
>WENV183585039
OOCR01000721
235129
Bacteroidota
GCC
Gly
>WENV183585040
OOCR01000721
59689
Bacteroidota
CAG
Leu
>WENV183585041
OOCR01000722
23696
Bacteroidota
GCT
Ser
>WENV183585051
OOCR01000766
144933
Bacteroidota
TCT
Arg
>WENV183585074
OOCR01000871
414426
Bacteroidota
CTG
Gln
>WENV183585078
OOCR01000884
144596
Bacteroidota
GGC
Ala
>WENV183585082
OOCR01000919
50727
Bacteroidota
TGA
Ser
>WENV183585087
OOCR01000963
338486
Bacteroidota
CAT
Met
>WENV183585096
OOCR01001021
425638
Bacteroidota
CTG
Gln
>WENV183585120
OOCR01001209
338486
Bacteroidota
CAT
Met
>WENV183585128
OOCR01001274
338132
Bacteroidota
GCA
Cys
>WENV183585129
OOCR01001293
240012
Bacteroidota
CCC
Gly
>WENV183585132
OOCR01001383
150485
Bacteroidota
GTT
Asn
>WENV183585204
OOCR01002618
16999
Bacteroidota
GGA
Ser
>WENV183585220
OOCR01003160
147439
Bacteroidota
TCT
Arg
>WENV183585225
OOCR01003356
80607
Bacteroidota
GTA
Tyr
>WENV183585227
OOCR01003441
45423
Bacteroidota
TGA
Ser
>WENV183585229
OOCR01003498
411550
Bacteroidota
CTG
Gln
>WENV183585230
OOCR01003498
411550
Bacteroidota
CTG
Gln
>WENV183585231
OOCR01003514
338132
Bacteroidota
GCA
Cys
>WENV183585282
OOCR01006730
280513
Bacteroidota
TTT
Lys
>WENV183585296
OOCR01007679
132360
Bacteroidota
GGG
Pro
>WENV183585303
OOCR01008299
126641
Bacteroidota
TAC
Val
>WENV183585309
OOCR01008805
153993
Bacteroidota
GAT
Ile
>WENV183585322
OOCR01010840
338164
Bacteroidota
TTC
Glu
>WENV183585361
OOCR01016963
338155
Bacteroidota
CTC
Glu
>WENV183585393
OOCR01021388
338125
Bacteroidota
CCT
Arg
>WENV183585416
OOCR01026529
95987
Bacteroidota
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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