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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183588079
OOCV01000008
235097
Bacteroidota
TTT
Lys
>WENV183588101
OOCV01000017
235097
Bacteroidota
TTT
Lys
>WENV183588366
OOCV01000390
235097
Bacteroidota
TTT
Lys
>WENV183588103
OOCV01000019
141635
Bacteroidota
TAC
Val
>WENV183588104
OOCV01000019
141635
Bacteroidota
TAC
Val
>WENV183588074
OOCV01000004
235102
Bacteroidota
CGT
Thr
>WENV183588855
OOCV01014782
144657
Bacteroidota
CGG
Pro
>WENV183588859
OOCV01015912
144657
Bacteroidota
CGG
Pro
>WENV183588361
OOCV01000357
243025
Bacteroidota
CAT
Met
>WENV183588085
OOCV01000011
97336
Bacteroidota
CAG
Leu
>WENV183588880
OOCV01018010
339341
Bacteroidota
GGT
Thr
>WENV183588445
OOCV01000712
343138
Bacteroidota
CCT
Arg
>WENV183588760
OOCV01006210
95618
Bacteroidota
TAG
Leu
>WENV183588856
OOCV01015183
338486
Bacteroidota
CAT
Met
>WENV183588695
OOCV01003986
338486
Bacteroidota
CAT
Met
>WENV183588644
OOCV01002876
338486
Bacteroidota
CAT
Met
>WENV183588117
OOCV01000025
413663
Bacteroidota
CTG
Gln
>WENV183588656
OOCV01003012
59689
Bacteroidota
CAG
Leu
>WENV183588097
OOCV01000015
436206
Bacteroidota
TTG
Gln
>WENV183588755
OOCV01006003
20893
Bacteroidota
GGA
Ser
>WENV183588219
OOCV01000103
144695
Bacteroidota
CAT
Met
>WENV183588073
OOCV01000004
338124
Bacteroidota
CCG
Arg
>WENV183588900
OOCV01021044
148575
Bacteroidota
CAT
Met
>WENV183588749
OOCV01005714
238121
Bacteroidota
CTT
Lys
>WENV183588748
OOCV01005714
238121
Bacteroidota
CTT
Lys
>WENV183588281
OOCV01000182
338132
Bacteroidota
GCA
Cys
>WENV183588128
OOCV01000034
338132
Bacteroidota
GCA
Cys
>WENV183588093
OOCV01000013
338132
Bacteroidota
GCA
Cys
>WENV183588092
OOCV01000013
338132
Bacteroidota
GCA
Cys
>WENV183588750
OOCV01005714
45423
Bacteroidota
TGA
Ser
>WENV183588206
OOCV01000096
37076
Bacteroidota
TAA
Leu
>WENV183588717
OOCV01004627
58714
Bacteroidota
CAA
Leu
>WENV183588063
OOCV01000002
301449
Bacteroidota
CGG
Pro
>WENV183588895
OOCV01020435
144933
Bacteroidota
TCT
Arg
>WENV183588491
OOCV01001018
144933
Bacteroidota
TCT
Arg
>WENV183588421
OOCV01000534
141414
Bacteroidota
GGG
Pro
>WENV183588108
OOCV01000020
141414
Bacteroidota
GGG
Pro
>WENV183588095
OOCV01000014
144656
Bacteroidota
GTG
His
>WENV183588373
OOCV01000414
235207
Bacteroidota
CAT
Met
>WENV183588372
OOCV01000414
235207
Bacteroidota
CAT
Met
>WENV183588088
OOCV01000012
235207
Bacteroidota
CAT
Met
>WENV183588511
OOCV01001153
144659
Bacteroidota
GTG
His
>WENV183588743
OOCV01005385
144596
Bacteroidota
GGC
Ala
>WENV183588885
OOCV01018377
80607
Bacteroidota
GTA
Tyr
>WENV183588197
OOCV01000076
80607
Bacteroidota
GTA
Tyr
>WENV183588109
OOCV01000021
113604
Bacteroidota
>WENV183588335
OOCV01000295
344769
Bacteroidota
CTC
Glu
>WENV183588230
OOCV01000117
154643
Bacteroidota
CAT
Met
>WENV183588100
OOCV01000016
415558
Bacteroidota
TTG
Gln
>WENV183588056
OOCV01000001
144590
Bacteroidota
GTT
Asn
>WENV183588055
OOCV01000001
144590
Bacteroidota
GTT
Asn
>WENV183588232
OOCV01000122
95559
Bacteroidota
TAG
Leu
>WENV183588163
OOCV01000048
144655
Bacteroidota
GGC
Ala
>WENV183588991
OOCV01036616
338164
Bacteroidota
TTC
Glu
>WENV183588572
OOCV01001795
95875
Bacteroidota
TAG
Leu
>WENV183588062
OOCV01000002
44852
Bacteroidota
TAA
Leu
>WENV183588059
OOCV01000001
44852
Bacteroidota
TAA
Leu
>WENV183588618
OOCV01002476
147439
Bacteroidota
TCT
Arg
>WENV183588381
OOCV01000432
238606
Bacteroidota
CGG
Pro
>WENV183588214
OOCV01000100
150485
Bacteroidota
GTT
Asn
>WENV183588213
OOCV01000100
150485
Bacteroidota
GTT
Asn
>WENV183588212
OOCV01000100
150485
Bacteroidota
GTT
Asn
>WENV183588617
OOCV01002469
411550
Bacteroidota
CTG
Gln
>WENV183588367
OOCV01000394
425638
Bacteroidota
CTG
Gln
>WENV183588179
OOCV01000057
353927
Bacteroidota
TTC
Glu
>WENV183588928
OOCV01024392
185921
Bacteroidota
GTC
Asp
>WENV183588607
OOCV01002332
23696
Bacteroidota
GCT
Ser
>WENV183588123
OOCV01000032
414426
Bacteroidota
CTG
Gln
>WENV183588086
OOCV01000011
59498
Bacteroidota
GAG
Leu
>WENV183588634
OOCV01002770
56823
Bacteroidota
TGA
Ser
>WENV183588188
OOCV01000064
56823
Bacteroidota
TGA
Ser
>WENV183588174
OOCV01000053
56823
Bacteroidota
TGA
Ser
>WENV183588132
OOCV01000035
56823
Bacteroidota
TGA
Ser
>WENV183588126
OOCV01000033
56823
Bacteroidota
TGA
Ser
>WENV183588693
OOCV01003879
16224
Bacteroidota
GGA
Ser
>WENV183588096
OOCV01000014
16224
Bacteroidota
GGA
Ser
>WENV183588107
OOCV01000020
16220
Bacteroidota
GGA
Ser
>WENV183588057
OOCV01000001
338125
Bacteroidota
CCT
Arg
>WENV183588563
OOCV01001721
235129
Bacteroidota
GCC
Gly
>WENV183588560
OOCV01001706
235129
Bacteroidota
GCC
Gly
>WENV183588550
OOCV01001581
235129
Bacteroidota
GCC
Gly
>WENV183588457
OOCV01000759
235129
Bacteroidota
GCC
Gly
>WENV183588455
OOCV01000759
235129
Bacteroidota
GCC
Gly
>WENV183588380
OOCV01000432
313363
Bacteroidota
GAA
Phe
>WENV183588102
OOCV01000018
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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