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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
102 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183611148
OODT01000015
235097
Bacteroidota
TTT
Lys
>WENV183611364
OODT01000176
235097
Bacteroidota
TTT
Lys
>WENV183611412
OODT01000228
235102
Bacteroidota
CGT
Thr
>WENV183611496
OODT01000355
144657
Bacteroidota
CGG
Pro
>WENV183612031
OODT01003969
243025
Bacteroidota
CAT
Met
>WENV183611240
OODT01000070
338155
Bacteroidota
CTC
Glu
>WENV183611258
OODT01000086
338155
Bacteroidota
CTC
Glu
>WENV183611649
OODT01000709
338155
Bacteroidota
CTC
Glu
>WENV183611402
OODT01000217
339341
Bacteroidota
GGT
Thr
>WENV183611476
OODT01000313
343138
Bacteroidota
CCT
Arg
>WENV183611358
OODT01000166
343138
Bacteroidota
CCT
Arg
>WENV183611673
OODT01000781
58715
Bacteroidota
GAG
Leu
>WENV183611128
OODT01000009
95618
Bacteroidota
TAG
Leu
>WENV183611547
OODT01000482
338486
Bacteroidota
CAT
Met
>WENV183611541
OODT01000478
338486
Bacteroidota
CAT
Met
>WENV183611125
OODT01000007
411543
Bacteroidota
CTG
Gln
>WENV183611499
OODT01000355
59689
Bacteroidota
CAG
Leu
>WENV183611524
OODT01000421
436206
Bacteroidota
TTG
Gln
>WENV183611359
OODT01000169
436206
Bacteroidota
TTG
Gln
>WENV183611819
OODT01001442
20893
Bacteroidota
GGA
Ser
>WENV183611526
OODT01000427
20893
Bacteroidota
GGA
Ser
>WENV183612119
OODT01008360
344692
Bacteroidota
GGT
Thr
>WENV183611341
OODT01000143
235182
Bacteroidota
>WENV183611163
OODT01000021
338124
Bacteroidota
CCG
Arg
>WENV183612187
OODT01015467
235203
Bacteroidota
TTT
Lys
>WENV183611426
OODT01000239
235203
Bacteroidota
TTT
Lys
>WENV183611675
OODT01000783
238121
Bacteroidota
CTT
Lys
>WENV183611674
OODT01000783
238121
Bacteroidota
CTT
Lys
>WENV183611109
OODT01000001
126641
Bacteroidota
TAC
Val
>WENV183611108
OODT01000001
126641
Bacteroidota
TAC
Val
>WENV183611516
OODT01000399
338132
Bacteroidota
GCA
Cys
>WENV183611439
OODT01000257
338132
Bacteroidota
GCA
Cys
>WENV183611348
OODT01000155
338132
Bacteroidota
GCA
Cys
>WENV183611276
OODT01000095
338132
Bacteroidota
GCA
Cys
>WENV183611229
OODT01000063
338132
Bacteroidota
GCA
Cys
>WENV183611320
OODT01000121
144688
Bacteroidota
CAT
Met
>WENV183611677
OODT01000783
45423
Bacteroidota
TGA
Ser
>WENV183611676
OODT01000783
45423
Bacteroidota
TGA
Ser
>WENV183611274
OODT01000094
193809
Bacteroidota
CAT
Met
>WENV183611212
OODT01000047
181746
Bacteroidota
GGC
Ala
>WENV183611369
OODT01000181
58714
Bacteroidota
CAA
Leu
>WENV183612083
OODT01005400
235165
Bacteroidota
CCA
Trp
>WENV183611838
OODT01001518
301449
Bacteroidota
CGG
Pro
>WENV183611553
OODT01000492
301449
Bacteroidota
CGG
Pro
>WENV183611448
OODT01000261
301449
Bacteroidota
CGG
Pro
>WENV183611399
OODT01000208
301449
Bacteroidota
CGG
Pro
>WENV183611192
OODT01000036
301449
Bacteroidota
CGG
Pro
>WENV183611272
OODT01000092
144933
Bacteroidota
TCT
Arg
>WENV183611342
OODT01000144
144933
Bacteroidota
TCT
Arg
>WENV183611387
OODT01000197
144933
Bacteroidota
TCT
Arg
>WENV183612086
OODT01005684
303954
Bacteroidota
GCC
Gly
>WENV183611195
OODT01000037
144656
Bacteroidota
GTG
His
>WENV183611175
OODT01000028
235207
Bacteroidota
CAT
Met
>WENV183611354
OODT01000160
143169
Bacteroidota
GGG
Pro
>WENV183611165
OODT01000023
143169
Bacteroidota
GGG
Pro
>WENV183611147
OODT01000015
143169
Bacteroidota
GGG
Pro
>WENV183611462
OODT01000292
144659
Bacteroidota
GTG
His
>WENV183611497
OODT01000355
235180
Bacteroidota
CCA
Trp
>WENV183611455
OODT01000284
80607
Bacteroidota
GTA
Tyr
>WENV183611362
OODT01000170
80607
Bacteroidota
GTA
Tyr
>WENV183611118
OODT01000005
80607
Bacteroidota
GTA
Tyr
>WENV183611928
OODT01002320
80614
Bacteroidota
>WENV183611463
OODT01000292
80614
Bacteroidota
>WENV183612176
OODT01014664
154643
Bacteroidota
CAT
Met
>WENV183611521
OODT01000411
95559
Bacteroidota
TAG
Leu
>WENV183611477
OODT01000315
144655
Bacteroidota
GGC
Ala
>WENV183611357
OODT01000166
338164
Bacteroidota
TTC
Glu
>WENV183611356
OODT01000166
338164
Bacteroidota
TTC
Glu
>WENV183611773
OODT01001122
95875
Bacteroidota
TAG
Leu
>WENV183611646
OODT01000702
240012
Bacteroidota
CCC
Gly
>WENV183611577
OODT01000537
44852
Bacteroidota
TAA
Leu
>WENV183611581
OODT01000544
147439
Bacteroidota
TCT
Arg
>WENV183612129
OODT01009661
150485
Bacteroidota
GTT
Asn
>WENV183611393
OODT01000203
411550
Bacteroidota
CTG
Gln
>WENV183611392
OODT01000203
411550
Bacteroidota
CTG
Gln
>WENV183612050
OODT01004627
338165
Bacteroidota
GGT
Thr
>WENV183611166
OODT01000023
425638
Bacteroidota
CTG
Gln
>WENV183611126
OODT01000008
425638
Bacteroidota
CTG
Gln
>WENV183611110
OODT01000001
425638
Bacteroidota
CTG
Gln
>WENV183611225
OODT01000062
239647
Bacteroidota
TTT
Lys
>WENV183611222
OODT01000056
19317
Bacteroidota
GGA
Ser
>WENV183611115
OODT01000004
19317
Bacteroidota
GGA
Ser
>WENV183611457
OODT01000286
185921
Bacteroidota
GTC
Asp
>WENV183611246
OODT01000078
185921
Bacteroidota
GTC
Asp
>WENV183611518
OODT01000399
23696
Bacteroidota
GCT
Ser
>WENV183611239
OODT01000070
23696
Bacteroidota
GCT
Ser
>WENV183612088
OODT01005730
414426
Bacteroidota
CTG
Gln
>WENV183611472
OODT01000305
56823
Bacteroidota
TGA
Ser
>WENV183611350
OODT01000157
56823
Bacteroidota
TGA
Ser
>WENV183611333
OODT01000131
56823
Bacteroidota
TGA
Ser
>WENV183611224
OODT01000059
56823
Bacteroidota
TGA
Ser
>WENV183611194
OODT01000037
56823
Bacteroidota
TGA
Ser
>WENV183611196
OODT01000037
16224
Bacteroidota
GGA
Ser
>WENV183611397
OODT01000207
16220
Bacteroidota
GGA
Ser
>WENV183611430
OODT01000246
338125
Bacteroidota
CCT
Arg
>WENV183611363
OODT01000172
338125
Bacteroidota
CCT
Arg
>WENV183611254
OODT01000082
338125
Bacteroidota
CCT
Arg
>WENV183611716
OODT01000962
235129
Bacteroidota
GCC
Gly
>WENV183611444
OODT01000258
235129
Bacteroidota
GCC
Gly
>WENV183611442
OODT01000258
235129
Bacteroidota
GCC
Gly
>WENV183611486
OODT01000335
411629
Bacteroidota
TTG
Gln
>WENV183611292
OODT01000104
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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