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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
65 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183638711
OQVI01000460
235097
Bacteroidota
TTT
Lys
>WENV183639364
OQVI01010731
95987
Bacteroidota
CAA
Leu
>WENV183638958
OQVI01002127
339412
Bacteroidota
GGT
Thr
>WENV183638843
OQVI01001093
235102
Bacteroidota
CGT
Thr
>WENV183638593
OQVI01000152
243025
Bacteroidota
CAT
Met
>WENV183638527
OQVI01000091
97336
Bacteroidota
CAG
Leu
>WENV183639816
OQVI01078261
153993
Bacteroidota
GAT
Ile
>WENV183639133
OQVI01004419
17323
Bacteroidota
GGA
Ser
>WENV183639142
OQVI01004566
415410
Bacteroidota
TTG
Gln
>WENV183638824
OQVI01000997
415410
Bacteroidota
TTG
Gln
>WENV183639399
OQVI01011806
411543
Bacteroidota
CTG
Gln
>WENV183638767
OQVI01000710
144695
Bacteroidota
CAT
Met
>WENV183638482
OQVI01000025
144695
Bacteroidota
CAT
Met
>WENV183639632
OQVI01030029
188343
Bacteroidota
TGC
Ala
>WENV183638590
OQVI01000148
147147
Bacteroidota
GTG
His
>WENV183639205
OQVI01005591
155123
Bacteroidota
GTT
Asn
>WENV183639204
OQVI01005591
155123
Bacteroidota
GTT
Asn
>WENV183639779
OQVI01062313
344692
Bacteroidota
GGT
Thr
>WENV183639261
OQVI01006816
344692
Bacteroidota
GGT
Thr
>WENV183639155
OQVI01004760
341950
Bacteroidota
>WENV183638823
OQVI01000991
338124
Bacteroidota
CCG
Arg
>WENV183638602
OQVI01000170
338124
Bacteroidota
CCG
Arg
>WENV183639562
OQVI01021676
126641
Bacteroidota
TAC
Val
>WENV183638721
OQVI01000486
338132
Bacteroidota
GCA
Cys
>WENV183638720
OQVI01000486
338132
Bacteroidota
GCA
Cys
>WENV183639305
OQVI01008401
37076
Bacteroidota
TAA
Leu
>WENV183638479
OQVI01000021
37076
Bacteroidota
TAA
Leu
>WENV183638597
OQVI01000159
144656
Bacteroidota
GTG
His
>WENV183639017
OQVI01002630
235207
Bacteroidota
CAT
Met
>WENV183638814
OQVI01000944
235207
Bacteroidota
CAT
Met
>WENV183638992
OQVI01002422
80607
Bacteroidota
GTA
Tyr
>WENV183638705
OQVI01000434
344769
Bacteroidota
CTC
Glu
>WENV183639048
OQVI01003062
154643
Bacteroidota
CAT
Met
>WENV183638808
OQVI01000884
154643
Bacteroidota
CAT
Met
>WENV183639154
OQVI01004752
415558
Bacteroidota
TTG
Gln
>WENV183639136
OQVI01004495
415558
Bacteroidota
TTG
Gln
>WENV183639467
OQVI01015661
144590
Bacteroidota
GTT
Asn
>WENV183638750
OQVI01000598
95559
Bacteroidota
TAG
Leu
>WENV183639368
OQVI01010869
419272
Bacteroidota
CTG
Gln
>WENV183639053
OQVI01003115
419272
Bacteroidota
CTG
Gln
>WENV183638813
OQVI01000931
419272
Bacteroidota
CTG
Gln
>WENV183638576
OQVI01000128
144655
Bacteroidota
GGC
Ala
>WENV183639617
OQVI01027682
95875
Bacteroidota
TAG
Leu
>WENV183639054
OQVI01003120
280469
Bacteroidota
CGT
Thr
>WENV183639400
OQVI01011837
167013
Bacteroidota
TGG
Pro
>WENV183639275
OQVI01007294
44852
Bacteroidota
TAA
Leu
>WENV183638896
OQVI01001515
44852
Bacteroidota
TAA
Leu
>WENV183639321
OQVI01008982
238606
Bacteroidota
CGG
Pro
>WENV183639325
OQVI01009130
50727
Bacteroidota
TGA
Ser
>WENV183638807
OQVI01000876
50727
Bacteroidota
TGA
Ser
>WENV183638729
OQVI01000510
50727
Bacteroidota
TGA
Ser
>WENV183638665
OQVI01000311
50727
Bacteroidota
TGA
Ser
>WENV183639377
OQVI01011067
132360
Bacteroidota
GGG
Pro
>WENV183639288
OQVI01007789
132360
Bacteroidota
GGG
Pro
>WENV183638569
OQVI01000121
132360
Bacteroidota
GGG
Pro
>WENV183638596
OQVI01000158
425638
Bacteroidota
CTG
Gln
>WENV183639100
OQVI01003794
19317
Bacteroidota
GGA
Ser
>WENV183638519
OQVI01000071
353927
Bacteroidota
TTC
Glu
>WENV183638932
OQVI01001856
146762
Bacteroidota
TGG
Pro
>WENV183638884
OQVI01001369
414426
Bacteroidota
CTG
Gln
>WENV183638976
OQVI01002254
146764
Bacteroidota
GTC
Asp
>WENV183638702
OQVI01000400
59498
Bacteroidota
GAG
Leu
>WENV183639115
OQVI01004168
16224
Bacteroidota
GGA
Ser
>WENV183638970
OQVI01002200
338125
Bacteroidota
CCT
Arg
>WENV183639208
OQVI01005629
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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