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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
67 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183647357
OQVS01000395
95987
Bacteroidota
CAA
Leu
>WENV183647822
OQVS01003140
95987
Bacteroidota
CAA
Leu
>WENV183648846
OQVS01046594
95987
Bacteroidota
CAA
Leu
>WENV183648254
OQVS01009649
339412
Bacteroidota
GGT
Thr
>WENV183647512
OQVS01001040
267954
Bacteroidota
GCC
Gly
>WENV183647788
OQVS01002686
267954
Bacteroidota
GCC
Gly
>WENV183647241
OQVS01000128
237796
Bacteroidota
CGT
Thr
>WENV183647249
OQVS01000137
237796
Bacteroidota
CGT
Thr
>WENV183647937
OQVS01004622
237796
Bacteroidota
CGT
Thr
>WENV183647211
OQVS01000064
413663
Bacteroidota
CTG
Gln
>WENV183647467
OQVS01000815
415410
Bacteroidota
TTG
Gln
>WENV183647419
OQVS01000621
136244
Bacteroidota
TAC
Val
>WENV183647397
OQVS01000572
136244
Bacteroidota
TAC
Val
>WENV183647195
OQVS01000029
136244
Bacteroidota
TAC
Val
>WENV183648714
OQVS01029909
136244
Bacteroidota
TAC
Val
>WENV183648105
OQVS01007070
136244
Bacteroidota
TAC
Val
>WENV183647815
OQVS01003083
136244
Bacteroidota
TAC
Val
>WENV183647621
OQVS01001635
136244
Bacteroidota
TAC
Val
>WENV183647515
OQVS01001047
136244
Bacteroidota
TAC
Val
>WENV183648976
OQVS01068454
237797
Bacteroidota
CCA
Trp
>WENV183647600
OQVS01001550
179643
Bacteroidota
GTC
Asp
>WENV183647894
OQVS01004018
144695
Bacteroidota
CAT
Met
>WENV183647474
OQVS01000841
144695
Bacteroidota
CAT
Met
>WENV183647807
OQVS01003013
412479
Bacteroidota
TTG
Gln
>WENV183647620
OQVS01001632
412479
Bacteroidota
TTG
Gln
>WENV183647891
OQVS01003971
147147
Bacteroidota
GTG
His
>WENV183647618
OQVS01001620
147147
Bacteroidota
GTG
His
>WENV183647318
OQVS01000300
147147
Bacteroidota
GTG
His
>WENV183647302
OQVS01000257
147147
Bacteroidota
GTG
His
>WENV183647425
OQVS01000643
155123
Bacteroidota
GTT
Asn
>WENV183648531
OQVS01019037
145504
Bacteroidota
TGT
Thr
>WENV183648652
OQVS01024381
146800
Bacteroidota
>WENV183647522
OQVS01001092
338132
Bacteroidota
GCA
Cys
>WENV183649142
OQVS01118334
104003
Bacteroidota
TAG
Leu
>WENV183648316
OQVS01011540
193809
Bacteroidota
CAT
Met
>WENV183647726
OQVS01002231
193809
Bacteroidota
CAT
Met
>WENV183647426
OQVS01000647
193809
Bacteroidota
CAT
Met
>WENV183647355
OQVS01000383
193809
Bacteroidota
CAT
Met
>WENV183647352
OQVS01000366
193809
Bacteroidota
CAT
Met
>WENV183647995
OQVS01005401
37076
Bacteroidota
TAA
Leu
>WENV183647702
OQVS01002075
37076
Bacteroidota
TAA
Leu
>WENV183647568
OQVS01001307
37076
Bacteroidota
TAA
Leu
>WENV183647554
OQVS01001224
37076
Bacteroidota
TAA
Leu
>WENV183647367
OQVS01000468
37076
Bacteroidota
TAA
Leu
>WENV183647674
OQVS01001963
251266
Bacteroidota
CTT
Lys
>WENV183648275
OQVS01010071
235207
Bacteroidota
CAT
Met
>WENV183647293
OQVS01000227
412235
Bacteroidota
>WENV183648947
OQVS01062671
344769
Bacteroidota
CTC
Glu
>WENV183648132
OQVS01007407
147148
Bacteroidota
CAT
Met
>WENV183648110
OQVS01007197
52358
Bacteroidota
TGA
Ser
>WENV183647869
OQVS01003680
415558
Bacteroidota
TTG
Gln
>WENV183647481
OQVS01000866
175704
Bacteroidota
TGC
Ala
>WENV183648893
OQVS01054181
419272
Bacteroidota
CTG
Gln
>WENV183647558
OQVS01001272
419272
Bacteroidota
CTG
Gln
>WENV183648114
OQVS01007266
263771
Bacteroidota
CTT
Lys
>WENV183648384
OQVS01013914
95875
Bacteroidota
TAG
Leu
>WENV183647997
OQVS01005420
44852
Bacteroidota
TAA
Leu
>WENV183648615
OQVS01022160
150485
Bacteroidota
GTT
Asn
>WENV183647622
OQVS01001635
95986
Bacteroidota
GTA
Tyr
>WENV183647956
OQVS01004788
196394
Bacteroidota
GTC
Asp
>WENV183648864
OQVS01050095
132360
Bacteroidota
GGG
Pro
>WENV183648734
OQVS01031796
353927
Bacteroidota
TTC
Glu
>WENV183647693
OQVS01002043
146764
Bacteroidota
GTC
Asp
>WENV183648936
OQVS01060200
96124
Bacteroidota
TAG
Leu
>WENV183647334
OQVS01000330
59498
Bacteroidota
GAG
Leu
>WENV183647167
OQVS01000002
127023
Bacteroidota
GGG
Pro
>WENV183648418
OQVS01014819
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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