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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183613071
OODU01001755
146880
Campylobacterota
CCT
Arg
>WENV183613069
OODU01001755
338365
Campylobacterota
GGT
Thr
>WENV183613085
OODU01001796
95929
Campylobacterota
TAG
Leu
>WENV183613083
OODU01001796
146881
Campylobacterota
TCG
Arg
>WENV183613084
OODU01001796
153060
Campylobacterota
TCT
Arg
>WENV183613219
OODU01002421
146878
Campylobacterota
CAT
Met
>WENV183613251
OODU01002674
80860
Campylobacterota
GAG
Leu
>WENV183613424
OODU01004237
45120
Campylobacterota
GGA
Ser
>WENV183613512
OODU01005636
1083
Campylobacterota
>WENV183613787
OODU01011769
146879
Campylobacterota
CAT
Met
>WENV183613836
OODU01013622
44891
Campylobacterota
TGA
Ser
>WENV183613834
OODU01013622
59122
Campylobacterota
TAA
Leu
>WENV183613888
OODU01015791
339477
Campylobacterota
CTC
Glu
>WENV183613883
OODU01015791
237496
Campylobacterota
TTT
Lys
>WENV183613884
OODU01015791
162721
Campylobacterota
>WENV183613887
OODU01015791
237494
Campylobacterota
CTT
Lys
>WENV183613886
OODU01015791
146882
Campylobacterota
GTC
Asp
>WENV183614437
OODU01071686
59123
Campylobacterota
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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