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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183626761
OOGK01000019
288517
Gammaproteobacteria
TGT
Thr
>WENV183626762
OOGK01000026
247974
Gammaproteobacteria
CCA
Trp
>WENV183626770
OOGK01000055
270352
Gammaproteobacteria
GCC
Gly
>WENV183626771
OOGK01000055
411842
Gammaproteobacteria
GCA
Cys
>WENV183626779
OOGK01000102
236366
Gammaproteobacteria
GTG
His
>WENV183626780
OOGK01000118
248041
Gammaproteobacteria
GGC
Ala
>WENV183626809
OOGK01001262
240536
Gammaproteobacteria
TTT
Lys
>WENV183626820
OOGK01001977
288517
Gammaproteobacteria
TGT
Thr
>WENV183626841
OOGK01003863
149578
Gammaproteobacteria
ACG
Arg
>WENV183626844
OOGK01003956
153865
Gammaproteobacteria
CCG
Arg
>WENV183626935
OOGK01012667
198797
Gammaproteobacteria
TGG
Pro
>WENV183627027
OOGK01025134
309581
Gammaproteobacteria
GAA
Phe
>WENV183627030
OOGK01025335
237412
Gammaproteobacteria
TAC
Val
>WENV183627120
OOGK01042717
237421
Gammaproteobacteria
TGT
Thr
>WENV183627261
OOGK01078775
273942
Gammaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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