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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
95 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170658429
JTFP01110985
451622
Gammaproteobacteria
GGT
Thr
>WENV170657780
JTFP01018938
271705
Gammaproteobacteria
TGG
Pro
>WENV170657991
JTFP01041874
271705
Gammaproteobacteria
TGG
Pro
>WENV170657993
JTFP01041874
271705
Gammaproteobacteria
TGG
Pro
>WENV170658121
JTFP01057142
271705
Gammaproteobacteria
TGG
Pro
>WENV170658216
JTFP01068684
30307
Gammaproteobacteria
TGA
Ser
>WENV170658054
JTFP01049275
12367
Gammaproteobacteria
GCT
Ser
>WENV170658430
JTFP01111145
12367
Gammaproteobacteria
GCT
Ser
>WENV170658312
JTFP01084634
273055
Gammaproteobacteria
CCG
Arg
>WENV170657557
JTFP01001406
112422
Gammaproteobacteria
CAG
Leu
>WENV170657549
JTFP01001195
30386
Gammaproteobacteria
TGA
Ser
>WENV170657934
JTFP01035954
270873
Gammaproteobacteria
GAT
Ile
>WENV170658424
JTFP01110234
460706
Gammaproteobacteria
TAC
Val
>WENV170658426
JTFP01110234
460706
Gammaproteobacteria
TAC
Val
>WENV170658278
JTFP01078988
273870
Gammaproteobacteria
ACG
Arg
>WENV170657990
JTFP01041874
452317
Gammaproteobacteria
GTG
His
>WENV170657992
JTFP01041874
452317
Gammaproteobacteria
GTG
His
>WENV170657771
JTFP01017814
271388
Gammaproteobacteria
ACG
Arg
>WENV170658051
JTFP01049275
271388
Gammaproteobacteria
ACG
Arg
>WENV170658144
JTFP01059573
274750
Gammaproteobacteria
TGG
Pro
>WENV170658293
JTFP01083110
296278
Gammaproteobacteria
GAT
Ile
>WENV170657534
JTFP01000352
296278
Gammaproteobacteria
GAT
Ile
>WENV170658487
JTFP01122656
296278
Gammaproteobacteria
GAT
Ile
>WENV170658502
JTFP01126256
296278
Gammaproteobacteria
GAT
Ile
>WENV170658120
JTFP01057112
451835
Gammaproteobacteria
GTT
Asn
>WENV170658471
JTFP01118264
451835
Gammaproteobacteria
GTT
Asn
>WENV170658473
JTFP01118264
451835
Gammaproteobacteria
GTT
Asn
>WENV170658574
JTFP01147833
179971
Gammaproteobacteria
GTA
Tyr
>WENV170657861
JTFP01026924
86880
Gammaproteobacteria
GGA
Ser
>WENV170657877
JTFP01028280
86880
Gammaproteobacteria
GGA
Ser
>WENV170657988
JTFP01041697
86880
Gammaproteobacteria
GGA
Ser
>WENV170658095
JTFP01054619
86880
Gammaproteobacteria
GGA
Ser
>WENV170658294
JTFP01083139
86880
Gammaproteobacteria
GGA
Ser
>WENV170658297
JTFP01083262
86880
Gammaproteobacteria
GGA
Ser
>WENV170657722
JTFP01012233
180135
Gammaproteobacteria
CAA
Leu
>WENV170658193
JTFP01067058
454013
Gammaproteobacteria
TAC
Val
>WENV170658195
JTFP01067058
454013
Gammaproteobacteria
TAC
Val
>WENV170658196
JTFP01067058
454013
Gammaproteobacteria
TAC
Val
>WENV170658198
JTFP01067058
454013
Gammaproteobacteria
TAC
Val
>WENV170658743
JTFP01199175
275791
Gammaproteobacteria
GAT
Ile
>WENV170657902
JTFP01031680
158476
Gammaproteobacteria
CAG
Leu
>WENV170658340
JTFP01090324
218592
Gammaproteobacteria
GAG
Leu
>WENV170658524
JTFP01132948
490454
Gammaproteobacteria
TTC
Glu
>WENV170658089
JTFP01053786
275915
Gammaproteobacteria
GGG
Pro
>WENV170658311
JTFP01084531
655197
Gammaproteobacteria
TTG
Gln
>WENV170657884
JTFP01029449
274751
Gammaproteobacteria
TCT
Arg
>WENV170657904
JTFP01031738
283315
Gammaproteobacteria
CCT
Arg
>WENV170658102
JTFP01054912
455970
Gammaproteobacteria
GCC
Gly
>WENV170658069
JTFP01050938
270618
Gammaproteobacteria
TCT
Arg
>WENV170658070
JTFP01050939
270618
Gammaproteobacteria
TCT
Arg
>WENV170658117
JTFP01056863
270618
Gammaproteobacteria
TCT
Arg
>WENV170657718
JTFP01011716
451876
Gammaproteobacteria
GTG
His
>WENV170658580
JTFP01149766
270662
Gammaproteobacteria
ACG
Arg
>WENV170657736
JTFP01013234
179985
Gammaproteobacteria
>WENV170657796
JTFP01020671
180130
Gammaproteobacteria
TAG
Leu
>WENV170657916
JTFP01033014
180130
Gammaproteobacteria
TAG
Leu
>WENV170658320
JTFP01086846
180130
Gammaproteobacteria
TAG
Leu
>WENV170657910
JTFP01032623
270870
Gammaproteobacteria
GGG
Pro
>WENV170658460
JTFP01115858
273869
Gammaproteobacteria
GTT
Asn
>WENV170658461
JTFP01115858
273869
Gammaproteobacteria
GTT
Asn
>WENV170657852
JTFP01026659
270655
Gammaproteobacteria
CAT
Met
>WENV170657854
JTFP01026659
270655
Gammaproteobacteria
CAT
Met
>WENV170658094
JTFP01054209
270655
Gammaproteobacteria
CAT
Met
>WENV170658225
JTFP01070388
270655
Gammaproteobacteria
CAT
Met
>WENV170658504
JTFP01127555
270655
Gammaproteobacteria
CAT
Met
>WENV170658577
JTFP01148580
273705
Gammaproteobacteria
CAT
Met
>WENV170658508
JTFP01128603
458770
Gammaproteobacteria
GGT
Thr
>WENV170658019
JTFP01045181
779598
Gammaproteobacteria
GCA
Cys
>WENV170658122
JTFP01057142
451839
Gammaproteobacteria
GTG
His
>WENV170657582
JTFP01003451
483745
Gammaproteobacteria
CAT
Met
>WENV170657770
JTFP01017814
271392
Gammaproteobacteria
ACG
Arg
>WENV170658177
JTFP01065694
780165
Gammaproteobacteria
GCA
Cys
>WENV170657989
JTFP01041874
270872
Gammaproteobacteria
CCG
Arg
>WENV170658479
JTFP01120355
270905
Gammaproteobacteria
CCG
Arg
>WENV170658222
JTFP01069701
452316
Gammaproteobacteria
TTT
Lys
>WENV170658427
JTFP01110234
452316
Gammaproteobacteria
TTT
Lys
>WENV170658526
JTFP01133560
481229
Gammaproteobacteria
TTC
Glu
>WENV170658371
JTFP01094248
270666
Gammaproteobacteria
CCA
Trp
>WENV170657793
JTFP01020335
451616
Gammaproteobacteria
GTT
Asn
>WENV170657937
JTFP01036084
451616
Gammaproteobacteria
GTT
Asn
>WENV170658418
JTFP01108944
451616
Gammaproteobacteria
GTT
Asn
>WENV170658015
JTFP01044246
276153
Gammaproteobacteria
TGG
Pro
>WENV170657795
JTFP01020671
179987
Gammaproteobacteria
TAG
Leu
>WENV170657657
JTFP01007072
275185
Gammaproteobacteria
CAT
Met
>WENV170658018
JTFP01045181
112298
Gammaproteobacteria
TAA
Leu
>WENV170658722
JTFP01190659
112298
Gammaproteobacteria
TAA
Leu
>WENV170658326
JTFP01087556
270875
Gammaproteobacteria
ACG
Arg
>WENV170658239
JTFP01073630
271316
Gammaproteobacteria
CAT
Met
>WENV170658576
JTFP01147833
451781
Gammaproteobacteria
GGT
Thr
>WENV170658321
JTFP01086846
653554
Gammaproteobacteria
TTG
Gln
>WENV170657971
JTFP01038499
270665
Gammaproteobacteria
CGG
Pro
>WENV170658322
JTFP01086984
270665
Gammaproteobacteria
CGG
Pro
>WENV170658605
JTFP01160376
451624
Gammaproteobacteria
TAC
Val
>WENV170658607
JTFP01160376
451624
Gammaproteobacteria
TAC
Val
>WENV170657738
JTFP01013234
465223
Gammaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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